RNA–Protein interactions for RNA: ENST00000366739.5

MRPL55-212, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-212ENST00000366739 PPFIBP1Q86W92 1011 aa12.88□□□□□ -0.35
MRPL55-212ENST00000366739 ZNF280BQ86YH2 543 aa12.88□□□□□ -0.35
MRPL55-212ENST00000366739 DTWD2Q8NBA8 298 aa12.88□□□□□ -0.35
MRPL55-212ENST00000366739 KLHL5Q96PQ7 755 aa12.88□□□□□ -0.35
MRPL55-212ENST00000366739 SH2D3AQ9BRG2 576 aa12.88□□□□□ -0.35
MRPL55-212ENST00000366739 FDXACB1Q9BRP7 624 aaPredicted RBP12.88□□□□□ -0.35
MRPL55-212ENST00000366739 KCNK12Q9HB15 430 aa12.88□□□□□ -0.35
MRPL55-212ENST00000366739 FAM105AQ9NUU6 356 aa12.88□□□□□ -0.35
MRPL55-212ENST00000366739 SEPT9Q9UHD8 586 aaPredicted RBP12.88□□□□□ -0.35
MRPL55-212ENST00000366739 DUSP12Q9UNI6 340 aa12.88□□□□□ -0.35
MRPL55-212ENST00000366739 NARSO43776 548 aaKnown RBP12.87□□□□□ -0.35
MRPL55-212ENST00000366739 CNPP09543 421 aaKnown RBP12.87□□□□□ -0.35
MRPL55-212ENST00000366739 KLRC2P26717 231 aa12.87□□□□□ -0.35
MRPL55-212ENST00000366739 GNA11P29992 359 aa12.87□□□□□ -0.35
MRPL55-212ENST00000366739 CLCN4P51793 760 aa12.87□□□□□ -0.35
MRPL55-212ENST00000366739 JAK3P52333 1124 aa12.87□□□□□ -0.35
MRPL55-212ENST00000366739 RCAN1P53805 252 aa12.87□□□□□ -0.35
MRPL55-212ENST00000366739 LETM2Q2VYF4 491 aa12.87□□□□□ -0.35
MRPL55-212ENST00000366739 LRCH2Q5VUJ6 765 aa12.87□□□□□ -0.35
MRPL55-212ENST00000366739 CCDC12Q8WUD4 166 aaPredicted RBP12.87□□□□□ -0.35
MRPL55-212ENST00000366739 RSPH1Q8WYR4 309 aa12.87□□□□□ -0.35
MRPL55-212ENST00000366739 SLC5A5Q92911 643 aa12.87□□□□□ -0.35
MRPL55-212ENST00000366739 CCDC136Q96JN2 1154 aa12.87□□□□□ -0.35
MRPL55-212ENST00000366739 CEP89Q96ST8 783 aa12.87□□□□□ -0.35
MRPL55-212ENST00000366739 RIT2Q99578 217 aa12.87□□□□□ -0.35
MRPL55-212ENST00000366739 RTP3Q9BQQ7 232 aa12.87□□□□□ -0.35
MRPL55-212ENST00000366739 TEKT3Q9BXF9 490 aa12.87□□□□□ -0.35
MRPL55-212ENST00000366739 WDR87Q6ZQQ6 2873 aa12.87□□□□□ -0.35
MRPL55-212ENST00000366739 IGKV6-21A0A0C4DH24 114 aa12.86□□□□□ -0.35
MRPL55-212ENST00000366739 CARNS1A5YM72 827 aa12.86□□□□□ -0.35
MRPL55-212ENST00000366739 LILRB3O75022 631 aa12.86□□□□□ -0.35
MRPL55-212ENST00000366739 N4BP1O75113 896 aaKnown RBP12.86□□□□□ -0.35
MRPL55-212ENST00000366739 DDHD2O94830 711 aa12.86□□□□□ -0.35
MRPL55-212ENST00000366739 STBD1O95210 358 aa12.86□□□□□ -0.35
MRPL55-212ENST00000366739 SKIP12755 728 aa12.86□□□□□ -0.35
MRPL55-212ENST00000366739 CPA1P15085 419 aa12.86□□□□□ -0.35
MRPL55-212ENST00000366739 SFNP31947 248 aa12.86□□□□□ -0.35
MRPL55-212ENST00000366739 AFF1P51825 1210 aaKnown RBP12.86□□□□□ -0.35
MRPL55-212ENST00000366739 CDC42EP1Q00587 391 aa12.86□□□□□ -0.35
MRPL55-212ENST00000366739 XKR3Q5GH77 459 aa12.86□□□□□ -0.35
MRPL55-212ENST00000366739 CATSPER4Q7RTX7 472 aa12.86□□□□□ -0.35
MRPL55-212ENST00000366739 RHPN2Q8IUC4 686 aa12.86□□□□□ -0.35
MRPL55-212ENST00000366739 KSR1Q8IVT5 923 aa12.86□□□□□ -0.35
MRPL55-212ENST00000366739 RSAD2Q8WXG1 361 aa12.86□□□□□ -0.35
MRPL55-212ENST00000366739 PHKBQ93100 1093 aa12.86□□□□□ -0.35
MRPL55-212ENST00000366739 NLRP4Q96MN2 994 aa12.86□□□□□ -0.35
MRPL55-212ENST00000366739 EMILIN2Q9BXX0 1053 aa12.86□□□□□ -0.35
MRPL55-212ENST00000366739 NIFKQ9BYG3 293 aaKnown RBP12.86□□□□□ -0.35
MRPL55-212ENST00000366739 SUCLA2Q9P2R7 463 aaPredicted RBP12.86□□□□□ -0.35
MRPL55-212ENST00000366739 CCDC196A0A1B0GTZ2 297 aa12.85□□□□□ -0.35
MRPL55-212ENST00000366739 C2CD2LO14523 706 aa12.85□□□□□ -0.35
MRPL55-212ENST00000366739 PRPF3O43395 683 aaKnown RBP12.85□□□□□ -0.35
MRPL55-212ENST00000366739 ZNF623O75123 536 aa12.85□□□□□ -0.35
MRPL55-212ENST00000366739 PSMD10O75832 226 aa12.85□□□□□ -0.35
MRPL55-212ENST00000366739 CFHP08603 1231 aa12.85□□□□□ -0.35
MRPL55-212ENST00000366739 MYBP10242 640 aa12.85□□□□□ -0.35
MRPL55-212ENST00000366739 DNM2P50570 870 aa12.85□□□□□ -0.35
MRPL55-212ENST00000366739 RAB27AP51159 221 aa12.85□□□□□ -0.35
MRPL55-212ENST00000366739 IRX6P78412 446 aaPredicted RBP12.85□□□□□ -0.35
MRPL55-212ENST00000366739 FGD1P98174 961 aa12.85□□□□□ -0.35
MRPL55-212ENST00000366739 TSGA10IPQ3SY00 556 aa12.85□□□□□ -0.35
MRPL55-212ENST00000366739 AGMOQ6ZNB7 445 aa12.85□□□□□ -0.35
MRPL55-212ENST00000366739 C15orf39Q6ZRI6 1047 aa12.85□□□□□ -0.35
MRPL55-212ENST00000366739 MIER3Q7Z3K6 550 aa12.85□□□□□ -0.35
MRPL55-212ENST00000366739 ZNF410Q86VK4 478 aa12.85□□□□□ -0.35
MRPL55-212ENST00000366739 URGCPQ8TCY9 931 aa12.85□□□□□ -0.35
MRPL55-212ENST00000366739 BICD2Q8TD16 824 aa12.85□□□□□ -0.35
MRPL55-212ENST00000366739 INO80BQ9C086 356 aaPredicted RBP12.85□□□□□ -0.35
MRPL55-212ENST00000366739 MAN1C1Q9NR34 630 aa12.85□□□□□ -0.35
MRPL55-212ENST00000366739 IGSF9Q9P2J2 1179 aa12.85□□□□□ -0.35
MRPL55-212ENST00000366739 PCDHB2Q9Y5E7 798 aa12.85□□□□□ -0.35
MRPL55-212ENST00000366739 WDR81Q562E7 1941 aa12.85□□□□□ -0.35
MRPL55-212ENST00000366739 CACNA1AO00555 2505 aa12.85□□□□□ -0.35
MRPL55-212ENST00000366739 ZNF292O60281 2723 aa12.84□□□□□ -0.35
MRPL55-212ENST00000366739 KRBA1A5PL33 1030 aa12.84□□□□□ -0.35
MRPL55-212ENST00000366739 DDX11L8A8MPP1 907 aa12.84□□□□□ -0.35
MRPL55-212ENST00000366739 STK25O00506 426 aa12.84□□□□□ -0.35
MRPL55-212ENST00000366739 MAFO75444 373 aaPredicted RBP12.84□□□□□ -0.35
MRPL55-212ENST00000366739 GBP2P32456 591 aaPredicted RBP12.84□□□□□ -0.35
MRPL55-212ENST00000366739 USP11P51784 963 aa12.84□□□□□ -0.35
MRPL55-212ENST00000366739 RDM1Q8NG50 284 aa12.84□□□□□ -0.35
MRPL55-212ENST00000366739 KCNG4Q8TDN1 519 aa12.84□□□□□ -0.35
MRPL55-212ENST00000366739 PGBD4Q96DM1 585 aa12.84□□□□□ -0.35
MRPL55-212ENST00000366739 MRPL17Q9NRX2 175 aaKnown RBP12.84□□□□□ -0.35
MRPL55-212ENST00000366739 AGPAT5Q9NUQ2 364 aa12.84□□□□□ -0.35
MRPL55-212ENST00000366739 VPS54Q9P1Q0 977 aa12.84□□□□□ -0.35
MRPL55-212ENST00000366739 CA14Q9ULX7 337 aa12.84□□□□□ -0.35
MRPL55-212ENST00000366739 FAN1Q9Y2M0 1017 aa12.84□□□□□ -0.35
MRPL55-212ENST00000366739 EP300Q09472 2414 aaPredicted RBP12.83□□□□□ -0.35
MRPL55-212ENST00000366739 C2orf16Q68DN1 1984 aa12.83□□□□□ -0.35
MRPL55-212ENST00000366739 DMXL1Q9Y485 3027 aa12.83□□□□□ -0.36
MRPL55-212ENST00000366739 NRP1O14786 923 aa12.83□□□□□ -0.36
MRPL55-212ENST00000366739 TDP2O95551 362 aa12.83□□□□□ -0.36
MRPL55-212ENST00000366739 POMCP01189 267 aa12.83□□□□□ -0.36
MRPL55-212ENST00000366739 ALDH2P05091 517 aa12.83□□□□□ -0.36
MRPL55-212ENST00000366739 URODP06132 367 aa12.83□□□□□ -0.36
MRPL55-212ENST00000366739 AK2P54819 239 aa12.83□□□□□ -0.36
MRPL55-212ENST00000366739 AKAP17AQ02040 695 aaKnown RBP12.83□□□□□ -0.36
MRPL55-212ENST00000366739 KRT32Q14532 448 aa12.83□□□□□ -0.36
MRPL55-212ENST00000366739 PLA2G4FQ68DD2 849 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms