RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 DCPSQ96C86 337 aaKnown RBP9.48□□□□□ -0.89
YBX3-204ENST00000366290 MAP6Q96JE9 813 aa9.48□□□□□ -0.89
YBX3-204ENST00000366290 ADAMTS10Q9H324 1103 aa9.48□□□□□ -0.89
YBX3-204ENST00000366290 GPR27Q9NS67 375 aa9.48□□□□□ -0.89
YBX3-204ENST00000366290 ANGEL1Q9UNK9 670 aaKnown RBP9.48□□□□□ -0.89
YBX3-204ENST00000366290 CASP8AP2Q9UKL3 1982 aa9.48□□□□□ -0.89
YBX3-204ENST00000366290 MYH13Q9UKX3 1938 aa9.47□□□□□ -0.89
YBX3-204ENST00000366290 PNMA6EA0A0J9YXQ4 647 aa9.47□□□□□ -0.89
YBX3-204ENST00000366290 AQP7O14520 342 aa9.47□□□□□ -0.89
YBX3-204ENST00000366290 CENPBP07199 599 aaPredicted RBP9.47□□□□□ -0.89
YBX3-204ENST00000366290 ZGLP1P0C6A0 271 aa9.47□□□□□ -0.89
YBX3-204ENST00000366290 LCP1P13796 627 aa9.47□□□□□ -0.89
YBX3-204ENST00000366290 SDSP20132 328 aa9.47□□□□□ -0.89
YBX3-204ENST00000366290 GYG1P46976 350 aa9.47□□□□□ -0.89
YBX3-204ENST00000366290 MASP1P48740 699 aa9.47□□□□□ -0.89
YBX3-204ENST00000366290 IRX6P78412 446 aaPredicted RBP9.47□□□□□ -0.89
YBX3-204ENST00000366290 DUSP4Q13115 394 aa9.47□□□□□ -0.89
YBX3-204ENST00000366290 GRM1Q13255 1194 aa9.47□□□□□ -0.89
YBX3-204ENST00000366290 INF2Q27J81 1249 aa9.47□□□□□ -0.89
YBX3-204ENST00000366290 MBLAC2Q68D91 279 aa9.47□□□□□ -0.89
YBX3-204ENST00000366290 CEP85Q6P2H3 762 aa9.47□□□□□ -0.89
YBX3-204ENST00000366290 SIRT2Q8IXJ6 389 aa9.47□□□□□ -0.89
YBX3-204ENST00000366290 LINC01599Q8WXQ3 324 aa9.47□□□□□ -0.89
YBX3-204ENST00000366290 LPIN2Q92539 896 aa9.47□□□□□ -0.89
YBX3-204ENST00000366290 ZFYVE21Q9BQ24 234 aa9.47□□□□□ -0.89
YBX3-204ENST00000366290 TMX1Q9H3N1 280 aa9.47□□□□□ -0.89
YBX3-204ENST00000366290 PAK6Q9NQU5 681 aaPredicted RBP9.47□□□□□ -0.89
YBX3-204ENST00000366290 GGA3Q9NZ52 723 aa9.47□□□□□ -0.89
YBX3-204ENST00000366290 TNFRSF10DQ9UBN6 386 aa9.47□□□□□ -0.89
YBX3-204ENST00000366290 EBF1Q9UH73 591 aa9.47□□□□□ -0.89
YBX3-204ENST00000366290 HDAC9Q9UKV0 1011 aa9.47□□□□□ -0.89
YBX3-204ENST00000366290 ASTN2O75129 1339 aaPredicted RBP9.47□□□□□ -0.89
YBX3-204ENST00000366290 SRGAP3O43295 1099 aa9.46□□□□□ -0.9
YBX3-204ENST00000366290 DNAJC6O75061 913 aa9.46□□□□□ -0.9
YBX3-204ENST00000366290 CAVIN4Q5BKX8 364 aa9.46□□□□□ -0.9
YBX3-204ENST00000366290 MFSD14BQ5SR56 506 aa9.46□□□□□ -0.9
YBX3-204ENST00000366290 HLA-DQA1Q5Y7H0 255 aa9.46□□□□□ -0.9
YBX3-204ENST00000366290 FGD2Q7Z6J4 655 aa9.46□□□□□ -0.9
YBX3-204ENST00000366290 ABI1Q8IZP0 508 aa9.46□□□□□ -0.9
YBX3-204ENST00000366290 RCBTB1Q8NDN9 531 aa9.46□□□□□ -0.9
YBX3-204ENST00000366290 EXOC6Q8TAG9 804 aa9.46□□□□□ -0.9
YBX3-204ENST00000366290 SCLYQ96I15 445 aa9.46□□□□□ -0.9
YBX3-204ENST00000366290 SPC25Q9HBM1 224 aa9.46□□□□□ -0.9
YBX3-204ENST00000366290 PRDM7Q9NQW5 492 aa9.46□□□□□ -0.9
YBX3-204ENST00000366290 TMEM59LQ9UK28 342 aa9.46□□□□□ -0.9
YBX3-204ENST00000366290 COL1A1P02452 1464 aaPredicted RBP9.46□□□□□ -0.9
YBX3-204ENST00000366290 PAPPA2Q9BXP8 1791 aa9.45□□□□□ -0.9
YBX3-204ENST00000366290 FADS2P1A8MWK0 482 aa9.45□□□□□ -0.9
YBX3-204ENST00000366290 ADM5C9JUS6 153 aa9.45□□□□□ -0.9
YBX3-204ENST00000366290 MSCO60682 206 aa9.45□□□□□ -0.9
YBX3-204ENST00000366290 DNAJC8O75937 253 aaPredicted RBP9.45□□□□□ -0.9
YBX3-204ENST00000366290 IFIT1P09914 478 aaKnown RBP9.45□□□□□ -0.9
YBX3-204ENST00000366290 SLC5A1P13866 664 aa9.45□□□□□ -0.9
YBX3-204ENST00000366290 FUT4P22083 530 aa9.45□□□□□ -0.9
YBX3-204ENST00000366290 IRAK1P51617 712 aa9.45□□□□□ -0.9
YBX3-204ENST00000366290 GPR85P60893 370 aa9.45□□□□□ -0.9
YBX3-204ENST00000366290 FKBP1BP68106 108 aa9.45□□□□□ -0.9
YBX3-204ENST00000366290 ATP8B2P98198 1209 aa9.45□□□□□ -0.9
YBX3-204ENST00000366290 IFNL3Q8IZI9 196 aa9.45□□□□□ -0.9
YBX3-204ENST00000366290 TBC1D22AQ8WUA7 517 aa9.45□□□□□ -0.9
YBX3-204ENST00000366290 MAGEB10Q96LZ2 347 aaPredicted RBP9.45□□□□□ -0.9
YBX3-204ENST00000366290 MRIQ9BWK5 157 aa9.45□□□□□ -0.9
YBX3-204ENST00000366290 KRTAP9-2Q9BYQ4 174 aa9.45□□□□□ -0.9
YBX3-204ENST00000366290 INTS7Q9NVH2 962 aaKnown RBP9.45□□□□□ -0.9
YBX3-204ENST00000366290 MAGEC2Q9UBF1 373 aaPredicted RBP9.45□□□□□ -0.9
YBX3-204ENST00000366290 ADGRE2Q9UHX3 823 aa9.45□□□□□ -0.9
YBX3-204ENST00000366290 PA2G4Q9UQ80 394 aaKnown RBP9.45□□□□□ -0.9
YBX3-204ENST00000366290 RASGRP1O95267 797 aa9.44□□□□□ -0.9
YBX3-204ENST00000366290 CRTAMO95727 393 aa9.44□□□□□ -0.9
YBX3-204ENST00000366290 MYCLP1P12525 358 aaPredicted RBP9.44□□□□□ -0.9
YBX3-204ENST00000366290 ATP2B3Q16720 1220 aa9.44□□□□□ -0.9
YBX3-204ENST00000366290 SLC23A3Q6PIS1 610 aa9.44□□□□□ -0.9
YBX3-204ENST00000366290 APOBEC3FQ8IUX4 373 aaKnown RBP9.44□□□□□ -0.9
YBX3-204ENST00000366290 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.44□□□□□ -0.9
YBX3-204ENST00000366290 SSH3Q8TE77 659 aa9.44□□□□□ -0.9
YBX3-204ENST00000366290 CDCA5Q96FF9 252 aa9.44□□□□□ -0.9
YBX3-204ENST00000366290 MCOLN1Q9GZU1 580 aa9.44□□□□□ -0.9
YBX3-204ENST00000366290 SIL1Q9H173 461 aa9.44□□□□□ -0.9
YBX3-204ENST00000366290 GBA2Q9HCG7 927 aaPredicted RBP9.44□□□□□ -0.9
YBX3-204ENST00000366290 PCDHA9Q9Y5H5 950 aa9.44□□□□□ -0.9
YBX3-204ENST00000366290 PDS5AQ29RF7 1337 aaKnown RBP9.44□□□□□ -0.9
YBX3-204ENST00000366290 SALL1Q9NSC2 1324 aa9.43□□□□□ -0.9
YBX3-204ENST00000366290 A0A087X0B3 334 aa9.43□□□□□ -0.9
YBX3-204ENST00000366290 C7orf72A4D263 438 aa9.43□□□□□ -0.9
YBX3-204ENST00000366290 USP2O75604 605 aaPredicted RBP9.43□□□□□ -0.9
YBX3-204ENST00000366290 KIR2DL1P43626 348 aaPredicted RBP9.43□□□□□ -0.9
YBX3-204ENST00000366290 KIR2DL2P43627 348 aaPredicted RBP9.43□□□□□ -0.9
YBX3-204ENST00000366290 GUCY1A3Q02108 690 aa9.43□□□□□ -0.9
YBX3-204ENST00000366290 DLGAP5Q15398 846 aa9.43□□□□□ -0.9
YBX3-204ENST00000366290 CFAP100Q494V2 611 aa9.43□□□□□ -0.9
YBX3-204ENST00000366290 LBX2Q6XYB7 198 aa9.43□□□□□ -0.9
YBX3-204ENST00000366290 MTDHQ86UE4 582 aaKnown RBP9.43□□□□□ -0.9
YBX3-204ENST00000366290 SLCO6A1Q86UG4 719 aa9.43□□□□□ -0.9
YBX3-204ENST00000366290 JAMLQ86YT9 394 aa9.43□□□□□ -0.9
YBX3-204ENST00000366290 PRMT6Q96LA8 375 aaPredicted RBP9.43□□□□□ -0.9
YBX3-204ENST00000366290 CHMP4BQ9H444 224 aaKnown RBP9.43□□□□□ -0.9
YBX3-204ENST00000366290 PCDHA2Q9Y5H9 948 aa9.43□□□□□ -0.9
YBX3-204ENST00000366290 PPP2R3BQ9Y5P8 575 aa9.43□□□□□ -0.9
YBX3-204ENST00000366290 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.42□□□□□ -0.9
YBX3-204ENST00000366290 CA12O43570 354 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms