RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 LONRF3Q496Y0 759 aa11.52□□□□□ -0.57
YBX3-203ENST00000366286 LRRC55Q6ZSA7 311 aa11.52□□□□□ -0.57
YBX3-203ENST00000366286 SPPL3Q8TCT6 385 aa11.52□□□□□ -0.57
YBX3-203ENST00000366286 POF1BQ8WVV4 589 aa11.52□□□□□ -0.57
YBX3-203ENST00000366286 LPPQ93052 612 aa11.52□□□□□ -0.57
YBX3-203ENST00000366286 TRAIPQ9BWF2 469 aa11.52□□□□□ -0.57
YBX3-203ENST00000366286 GPRC5CQ9NQ84 441 aa11.52□□□□□ -0.57
YBX3-203ENST00000366286 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.52□□□□□ -0.57
YBX3-203ENST00000366286 AAASQ9NRG9 546 aa11.52□□□□□ -0.57
YBX3-203ENST00000366286 PCDHB12Q9Y5F1 795 aa11.52□□□□□ -0.57
YBX3-203ENST00000366286 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.51□□□□□ -0.57
YBX3-203ENST00000366286 MEIS3P2A8K0S8 358 aa11.51□□□□□ -0.57
YBX3-203ENST00000366286 LAD1O00515 517 aa11.51□□□□□ -0.57
YBX3-203ENST00000366286 TSPAN1O60635 241 aa11.51□□□□□ -0.57
YBX3-203ENST00000366286 ERLIN2O94905 339 aa11.51□□□□□ -0.57
YBX3-203ENST00000366286 SKIP12755 728 aa11.51□□□□□ -0.57
YBX3-203ENST00000366286 BMP1P13497 986 aa11.51□□□□□ -0.57
YBX3-203ENST00000366286 GLRA2P23416 452 aa11.51□□□□□ -0.57
YBX3-203ENST00000366286 IRS1P35568 1242 aa11.51□□□□□ -0.57
YBX3-203ENST00000366286 PBX3P40426 434 aa11.51□□□□□ -0.57
YBX3-203ENST00000366286 PRPHP41219 470 aa11.51□□□□□ -0.57
YBX3-203ENST00000366286 PTENP60484 403 aa11.51□□□□□ -0.57
YBX3-203ENST00000366286 MBTD1Q05BQ5 628 aa11.51□□□□□ -0.57
YBX3-203ENST00000366286 CUL4AQ13619 759 aa11.51□□□□□ -0.57
YBX3-203ENST00000366286 COL19A1Q14993 1142 aa11.51□□□□□ -0.57
YBX3-203ENST00000366286 IL17AQ16552 155 aa11.51□□□□□ -0.57
YBX3-203ENST00000366286 ECM1Q16610 540 aa11.51□□□□□ -0.57
YBX3-203ENST00000366286 RILPL1Q5EBL4 403 aa11.51□□□□□ -0.57
YBX3-203ENST00000366286 MAEAQ7L5Y9 396 aa11.51□□□□□ -0.57
YBX3-203ENST00000366286 IFNLR1Q8IU57 520 aaPredicted RBP11.51□□□□□ -0.57
YBX3-203ENST00000366286 THNSL1Q8IYQ7 743 aa11.51□□□□□ -0.57
YBX3-203ENST00000366286 IGSF22Q8N9C0 903 aa11.51□□□□□ -0.57
YBX3-203ENST00000366286 MCPH1Q8NEM0 835 aa11.51□□□□□ -0.57
YBX3-203ENST00000366286 SNX29Q8TEQ0 813 aa11.51□□□□□ -0.57
YBX3-203ENST00000366286 NACC1Q96RE7 527 aa11.51□□□□□ -0.57
YBX3-203ENST00000366286 RAB34Q9BZG1 259 aa11.51□□□□□ -0.57
YBX3-203ENST00000366286 LRWD1Q9UFC0 647 aa11.51□□□□□ -0.57
YBX3-203ENST00000366286 PCDHGC5Q9Y5F6 944 aa11.51□□□□□ -0.57
YBX3-203ENST00000366286 TRIP11Q15643 1979 aa11.5□□□□□ -0.57
YBX3-203ENST00000366286 ARHGEF35A5YM69 484 aa11.5□□□□□ -0.57
YBX3-203ENST00000366286 LRRIQ4A6NIV6 560 aa11.5□□□□□ -0.57
YBX3-203ENST00000366286 PP2D1A8MPX8 630 aa11.5□□□□□ -0.57
YBX3-203ENST00000366286 INO80B-WBP1J3KQ70 363 aa11.5□□□□□ -0.57
YBX3-203ENST00000366286 FGF18O76093 207 aa11.5□□□□□ -0.57
YBX3-203ENST00000366286 MUTP22033 750 aa11.5□□□□□ -0.57
YBX3-203ENST00000366286 KCNA5P22460 613 aa11.5□□□□□ -0.57
YBX3-203ENST00000366286 HOXA11P31270 313 aaPredicted RBP11.5□□□□□ -0.57
YBX3-203ENST00000366286 GTF2F1P35269 517 aaKnown RBP eCLIP11.5□□□□□ -0.57
YBX3-203ENST00000366286 ATP2C1P98194 919 aaPredicted RBP11.5□□□□□ -0.57
YBX3-203ENST00000366286 HYAL1Q12794 435 aa11.5□□□□□ -0.57
YBX3-203ENST00000366286 CSPP1Q1MSJ5 1256 aa11.5□□□□□ -0.57
YBX3-203ENST00000366286 UBXN11Q5T124 520 aa11.5□□□□□ -0.57
YBX3-203ENST00000366286 LARP1BQ659C4 914 aaKnown RBP11.5□□□□□ -0.57
YBX3-203ENST00000366286 PADI6Q6TGC4 694 aa11.5□□□□□ -0.57
YBX3-203ENST00000366286 ADGRD2Q7Z7M1 963 aa11.5□□□□□ -0.57
YBX3-203ENST00000366286 PABPC5Q96DU9 382 aaKnown RBP11.5□□□□□ -0.57
YBX3-203ENST00000366286 CPB2Q96IY4 423 aa11.5□□□□□ -0.57
YBX3-203ENST00000366286 ZNF558Q96NG5 402 aa11.5□□□□□ -0.57
YBX3-203ENST00000366286 NECAB3Q96P71 396 aaPredicted RBP11.5□□□□□ -0.57
YBX3-203ENST00000366286 UHRF1Q96T88 793 aaPredicted RBP11.5□□□□□ -0.57
YBX3-203ENST00000366286 MRPL9Q9BYD2 267 aaKnown RBP11.5□□□□□ -0.57
YBX3-203ENST00000366286 NFKBIZQ9BYH8 718 aa11.5□□□□□ -0.57
YBX3-203ENST00000366286 TLR9Q9NR96 1032 aa11.5□□□□□ -0.57
YBX3-203ENST00000366286 DDX19AQ9NUU7 478 aaKnown RBP11.5□□□□□ -0.57
YBX3-203ENST00000366286 CLDND1Q9NY35 253 aa11.5□□□□□ -0.57
YBX3-203ENST00000366286 PCDHB2Q9Y5E7 798 aa11.5□□□□□ -0.57
YBX3-203ENST00000366286 ZNF623O75123 536 aa11.49□□□□□ -0.57
YBX3-203ENST00000366286 AXLP30530 894 aa11.49□□□□□ -0.57
YBX3-203ENST00000366286 UBE3AQ05086 875 aa11.49□□□□□ -0.57
YBX3-203ENST00000366286 POU5F1BQ06416 359 aa11.49□□□□□ -0.57
YBX3-203ENST00000366286 PDIA5Q14554 519 aa11.49□□□□□ -0.57
YBX3-203ENST00000366286 PCBP1Q15365 356 aaKnown RBP eCLIP11.49□□□□□ -0.57
YBX3-203ENST00000366286 AMHR2Q16671 573 aa11.49□□□□□ -0.57
YBX3-203ENST00000366286 LEXMQ3ZCV2 418 aa11.49□□□□□ -0.57
YBX3-203ENST00000366286 CDCA2Q69YH5 1023 aaPredicted RBP11.49□□□□□ -0.57
YBX3-203ENST00000366286 NOTUMQ6P988 496 aa11.49□□□□□ -0.57
YBX3-203ENST00000366286 KCNT2Q6UVM3 1135 aa11.49□□□□□ -0.57
YBX3-203ENST00000366286 GLB1LQ6UWU2 654 aa11.49□□□□□ -0.57
YBX3-203ENST00000366286 DTHD1Q6ZMT9 781 aa11.49□□□□□ -0.57
YBX3-203ENST00000366286 AGMOQ6ZNB7 445 aa11.49□□□□□ -0.57
YBX3-203ENST00000366286 EP400NLQ6ZTU2 488 aa11.49□□□□□ -0.57
YBX3-203ENST00000366286 BSNDQ8WZ55 320 aa11.49□□□□□ -0.57
YBX3-203ENST00000366286 MMTAG2Q9BU76 263 aaKnown RBP11.49□□□□□ -0.57
YBX3-203ENST00000366286 EIF2AQ9BY44 585 aaKnown RBP11.49□□□□□ -0.57
YBX3-203ENST00000366286 BHMT2Q9H2M3 363 aa11.49□□□□□ -0.57
YBX3-203ENST00000366286 KIAA1024Q9UPX6 916 aa11.49□□□□□ -0.57
YBX3-203ENST00000366286 INPP5FQ9Y2H2 1132 aa11.49□□□□□ -0.57
YBX3-203ENST00000366286 PDCD11Q14690 1871 aaKnown RBP11.49□□□□□ -0.57
YBX3-203ENST00000366286 VPS37CA5D8V6 355 aaPredicted RBP11.48□□□□□ -0.57
YBX3-203ENST00000366286 H3BQ06 376 aaPredicted RBP11.48□□□□□ -0.57
YBX3-203ENST00000366286 FSCN2O14926 492 aa11.48□□□□□ -0.57
YBX3-203ENST00000366286 LINC01565O15544 149 aa11.48□□□□□ -0.57
YBX3-203ENST00000366286 B4GALT5O43286 388 aa11.48□□□□□ -0.57
YBX3-203ENST00000366286 ZC3H11AO75152 810 aaKnown RBP eCLIP11.48□□□□□ -0.57
YBX3-203ENST00000366286 TBX10O75333 385 aa11.48□□□□□ -0.57
YBX3-203ENST00000366286 OFD1O75665 1012 aa11.48□□□□□ -0.57
YBX3-203ENST00000366286 ARF4P18085 180 aaPredicted RBP11.48□□□□□ -0.57
YBX3-203ENST00000366286 CYP11B2P19099 503 aa11.48□□□□□ -0.57
YBX3-203ENST00000366286 NCLP19338 710 aaKnown RBP11.48□□□□□ -0.57
YBX3-203ENST00000366286 CDC25AP30304 524 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms