RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 NR3C2P08235 984 aa12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 SMIM10L2AP0DMW4 78 aa12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 SMIM10L2BP0DMW5 78 aa12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 UBA7P41226 1012 aa12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 SARSP49591 514 aaKnown RBP12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 ZNF165P49910 485 aa12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 CCDC173Q0VFZ6 552 aa12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 PNOCQ13519 176 aa12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 TMEM266Q2M3C6 531 aa12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 Q4G0T1 1027 aa12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 NAALADL2Q58DX5 795 aa12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 CELF3Q5SZQ8 465 aaKnown RBP12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 RBM23Q86U06 439 aaKnown RBP12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 MCF2L2Q86YR7 1114 aa12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 PDILTQ8N807 584 aa12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 TRIML1Q8N9V2 468 aa12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 SPATA20Q8TB22 786 aa12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 SPPL3Q8TCT6 385 aa12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 PPP1R9BQ96SB3 815 aa12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 BPIFA3Q9BQP9 254 aa12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 NAT10Q9H0A0 1025 aaKnown RBP12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 DNAJC25Q9H1X3 360 aa12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 CBX8Q9HC52 389 aa12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 PXMP2Q9NR77 195 aa12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 CCDC39Q9UFE4 941 aa12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 BAHCC1Q9P281 2608 aa12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 OTOGLQ3ZCN5 2332 aa12.51□□□□□ -0.41
CSNK1E-202ENST00000366216 H3BRB1 525 aa12.51□□□□□ -0.41
CSNK1E-202ENST00000366216 SLC26A4O43511 780 aa12.51□□□□□ -0.41
CSNK1E-202ENST00000366216 SMC2O95347 1197 aa12.51□□□□□ -0.41
CSNK1E-202ENST00000366216 CHRNA1P02708 482 aa12.51□□□□□ -0.41
CSNK1E-202ENST00000366216 HSD17B4P51659 736 aa12.51□□□□□ -0.41
CSNK1E-202ENST00000366216 ADAM17P78536 824 aa12.51□□□□□ -0.41
CSNK1E-202ENST00000366216 FAM26DQ5JW98 314 aa12.51□□□□□ -0.41
CSNK1E-202ENST00000366216 ARHGEF16Q5VV41 709 aa12.51□□□□□ -0.41
CSNK1E-202ENST00000366216 PDXDC2PQ6P474 469 aa12.51□□□□□ -0.41
CSNK1E-202ENST00000366216 VN1R2Q8NFZ6 395 aa12.51□□□□□ -0.41
CSNK1E-202ENST00000366216 LINC01599Q8WXQ3 324 aa12.51□□□□□ -0.41
CSNK1E-202ENST00000366216 ERCC4Q92889 916 aaPredicted RBP12.51□□□□□ -0.41
CSNK1E-202ENST00000366216 PAGE5Q96GU1 130 aa12.51□□□□□ -0.41
CSNK1E-202ENST00000366216 SPATA33Q96N06 139 aa12.51□□□□□ -0.41
CSNK1E-202ENST00000366216 CUEDC2Q9H467 287 aa12.51□□□□□ -0.41
CSNK1E-202ENST00000366216 TUT1Q9H6E5 874 aaKnown RBP12.51□□□□□ -0.41
CSNK1E-202ENST00000366216 MAGEF1Q9HAY2 307 aa12.51□□□□□ -0.41
CSNK1E-202ENST00000366216 KCNMB3Q9NPA1 279 aa12.51□□□□□ -0.41
CSNK1E-202ENST00000366216 DISC1Q9NRI5 854 aa12.51□□□□□ -0.41
CSNK1E-202ENST00000366216 PCDHA5Q9Y5H7 936 aa12.51□□□□□ -0.41
CSNK1E-202ENST00000366216 MRPL42Q9Y6G3 142 aaKnown RBP12.51□□□□□ -0.41
CSNK1E-202ENST00000366216 C2orf16Q68DN1 1984 aa12.5□□□□□ -0.41
CSNK1E-202ENST00000366216 DGKIO75912 1065 aa12.5□□□□□ -0.41
CSNK1E-202ENST00000366216 GGPS1O95749 300 aa12.5□□□□□ -0.41
CSNK1E-202ENST00000366216 CFBP00751 764 aa12.5□□□□□ -0.41
CSNK1E-202ENST00000366216 UBA1P22314 1058 aaKnown RBP12.5□□□□□ -0.41
CSNK1E-202ENST00000366216 HOXA13P31271 388 aaPredicted RBP12.5□□□□□ -0.41
CSNK1E-202ENST00000366216 TECP42680 631 aa12.5□□□□□ -0.41
CSNK1E-202ENST00000366216 TXKP42681 527 aa12.5□□□□□ -0.41
CSNK1E-202ENST00000366216 MTMR3Q13615 1198 aa12.5□□□□□ -0.41
CSNK1E-202ENST00000366216 IQCB1Q15051 598 aa12.5□□□□□ -0.41
CSNK1E-202ENST00000366216 RRAGBQ5VZM2 374 aa12.5□□□□□ -0.41
CSNK1E-202ENST00000366216 C11orf57Q6ZUT1 292 aaPredicted RBP12.5□□□□□ -0.41
CSNK1E-202ENST00000366216 DGLUCYQ7Z3D6 616 aa12.5□□□□□ -0.41
CSNK1E-202ENST00000366216 CABP7Q86V35 215 aa12.5□□□□□ -0.41
CSNK1E-202ENST00000366216 SLFN12Q8IYM2 578 aa12.5□□□□□ -0.41
CSNK1E-202ENST00000366216 UBALD2Q8IYN6 164 aa12.5□□□□□ -0.41
CSNK1E-202ENST00000366216 CRIPAKQ8N1N5 446 aa12.5□□□□□ -0.41
CSNK1E-202ENST00000366216 KLHL23Q8NBE8 558 aa12.5□□□□□ -0.41
CSNK1E-202ENST00000366216 KREMEN2Q8NCW0 462 aa12.5□□□□□ -0.41
CSNK1E-202ENST00000366216 HAS1Q92839 578 aa12.5□□□□□ -0.41
CSNK1E-202ENST00000366216 SMARCE1Q969G3 411 aa12.5□□□□□ -0.41
CSNK1E-202ENST00000366216 TLE6Q9H808 572 aa12.5□□□□□ -0.41
CSNK1E-202ENST00000366216 SETD4Q9NVD3 440 aa12.5□□□□□ -0.41
CSNK1E-202ENST00000366216 GPR179Q6PRD1 2367 aa12.5□□□□□ -0.41
CSNK1E-202ENST00000366216 CFAP47Q6ZTR5 3102 aa12.5□□□□□ -0.41
CSNK1E-202ENST00000366216 ENPP3O14638 875 aa12.49□□□□□ -0.41
CSNK1E-202ENST00000366216 RIOK3O14730 519 aaKnown RBP12.49□□□□□ -0.41
CSNK1E-202ENST00000366216 LGALS2P05162 132 aa12.49□□□□□ -0.41
CSNK1E-202ENST00000366216 MYL1P05976 194 aa12.49□□□□□ -0.41
CSNK1E-202ENST00000366216 STAT6P42226 847 aa12.49□□□□□ -0.41
CSNK1E-202ENST00000366216 DPYDQ12882 1025 aa12.49□□□□□ -0.41
CSNK1E-202ENST00000366216 SEMA3FQ13275 785 aa12.49□□□□□ -0.41
CSNK1E-202ENST00000366216 KARSQ15046 597 aaKnown RBP12.49□□□□□ -0.41
CSNK1E-202ENST00000366216 ASTLQ6HA08 431 aaPredicted RBP12.49□□□□□ -0.41
CSNK1E-202ENST00000366216 KCNV1Q6PIU1 500 aa12.49□□□□□ -0.41
CSNK1E-202ENST00000366216 RUFY4Q6ZNE9 571 aa12.49□□□□□ -0.41
CSNK1E-202ENST00000366216 RTN4RL1Q86UN2 441 aaPredicted RBP12.49□□□□□ -0.41
CSNK1E-202ENST00000366216 TRIM50Q86XT4 487 aa12.49□□□□□ -0.41
CSNK1E-202ENST00000366216 CMTR2Q8IYT2 770 aaKnown RBP12.49□□□□□ -0.41
CSNK1E-202ENST00000366216 ATP8B4Q8TF62 1192 aa12.49□□□□□ -0.41
CSNK1E-202ENST00000366216 POF1BQ8WVV4 589 aa12.49□□□□□ -0.41
CSNK1E-202ENST00000366216 RMDN1Q96DB5 314 aa12.49□□□□□ -0.41
CSNK1E-202ENST00000366216 PDLIM2Q96JY6 352 aa12.49□□□□□ -0.41
CSNK1E-202ENST00000366216 FAM20AQ96MK3 541 aa12.49□□□□□ -0.41
CSNK1E-202ENST00000366216 GSDMAQ96QA5 445 aa12.49□□□□□ -0.41
CSNK1E-202ENST00000366216 PDCD2LQ9BRP1 358 aa12.49□□□□□ -0.41
CSNK1E-202ENST00000366216 TTC12Q9H892 705 aaPredicted RBP12.49□□□□□ -0.41
CSNK1E-202ENST00000366216 LRWD1Q9UFC0 647 aa12.49□□□□□ -0.41
CSNK1E-202ENST00000366216 MAN1B1Q9UKM7 699 aa12.49□□□□□ -0.41
CSNK1E-202ENST00000366216 SORCS3Q9UPU3 1222 aa12.49□□□□□ -0.41
CSNK1E-202ENST00000366216 STK24Q9Y6E0 443 aa12.49□□□□□ -0.41
CSNK1E-202ENST00000366216 CHD8Q9HCK8 2581 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms