RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 HOXA3O43365 443 aaPredicted RBP3.61□□□□□ -1.83
RNU6-238P-201ENST00000363313 ADCY3O60266 1144 aa3.61□□□□□ -1.83
RNU6-238P-201ENST00000363313 CRTAMO95727 393 aa3.61□□□□□ -1.83
RNU6-238P-201ENST00000363313 PRLP01236 227 aa3.61□□□□□ -1.83
RNU6-238P-201ENST00000363313 SEC24CP53992 1094 aa3.61□□□□□ -1.83
RNU6-238P-201ENST00000363313 TMEM132BQ14DG7 1078 aa3.61□□□□□ -1.83
RNU6-238P-201ENST00000363313 DDB1Q16531 1140 aa3.61□□□□□ -1.83
RNU6-238P-201ENST00000363313 TM4SF20Q53R12 229 aa3.61□□□□□ -1.83
RNU6-238P-201ENST00000363313 ABHD17BQ5VST6 288 aa3.61□□□□□ -1.83
RNU6-238P-201ENST00000363313 ARMC6Q6NXE6 501 aa3.61□□□□□ -1.83
RNU6-238P-201ENST00000363313 DOK3Q7L591 496 aa3.61□□□□□ -1.83
RNU6-238P-201ENST00000363313 OTOP1Q7RTM1 612 aa3.61□□□□□ -1.83
RNU6-238P-201ENST00000363313 OVCH1Q7RTY7 1134 aa3.61□□□□□ -1.83
RNU6-238P-201ENST00000363313 OR52N2Q8NGI0 321 aa3.61□□□□□ -1.83
RNU6-238P-201ENST00000363313 HNRNPLLQ8WVV9 542 aaKnown RBP3.61□□□□□ -1.83
RNU6-238P-201ENST00000363313 DYDC2Q96IM9 177 aa3.61□□□□□ -1.83
RNU6-238P-201ENST00000363313 NDC1Q9BTX1 674 aa3.61□□□□□ -1.83
RNU6-238P-201ENST00000363313 KRTAP1-5Q9BYS1 174 aa3.61□□□□□ -1.83
RNU6-238P-201ENST00000363313 PRDM13Q9H4Q3 707 aa3.61□□□□□ -1.83
RNU6-238P-201ENST00000363313 POLR3BQ9NW08 1133 aaPredicted RBP3.61□□□□□ -1.83
RNU6-238P-201ENST00000363313 RAB33AQ14088 237 aa3.6□□□□□ -1.83
RNU6-238P-201ENST00000363313 VPS72Q15906 364 aa3.6□□□□□ -1.83
RNU6-238P-201ENST00000363313 MCF2L2Q86YR7 1114 aa3.6□□□□□ -1.83
RNU6-238P-201ENST00000363313 SIMC1Q8NDZ2 872 aa3.6□□□□□ -1.83
RNU6-238P-201ENST00000363313 CAGE1Q8TC20 777 aa3.6□□□□□ -1.83
RNU6-238P-201ENST00000363313 RPGRQ92834 1020 aaKnown RBP3.6□□□□□ -1.83
RNU6-238P-201ENST00000363313 GMLQ99445 158 aa3.6□□□□□ -1.83
RNU6-238P-201ENST00000363313 DHRS4Q9BTZ2 278 aa3.6□□□□□ -1.83
RNU6-238P-201ENST00000363313 WDR11Q9BZH6 1224 aa3.6□□□□□ -1.83
RNU6-238P-201ENST00000363313 ENKD1Q9H0I2 346 aa3.6□□□□□ -1.83
RNU6-238P-201ENST00000363313 ACSS2Q9NR19 701 aa3.6□□□□□ -1.83
RNU6-238P-201ENST00000363313 SFMBT1Q9UHJ3 866 aa3.6□□□□□ -1.83
RNU6-238P-201ENST00000363313 EIF2B4Q9UI10 523 aaKnown RBP3.6□□□□□ -1.83
RNU6-238P-201ENST00000363313 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.6□□□□□ -1.83
RNU6-238P-201ENST00000363313 FRMD4BQ9Y2L6 1034 aa3.6□□□□□ -1.83
RNU6-238P-201ENST00000363313 FSBPO95073 299 aa3.59□□□□□ -1.83
RNU6-238P-201ENST00000363313 ESRRBO95718 433 aa3.59□□□□□ -1.83
RNU6-238P-201ENST00000363313 CYP17A1P05093 508 aa3.59□□□□□ -1.83
RNU6-238P-201ENST00000363313 HLA-DOAP06340 250 aa3.59□□□□□ -1.83
RNU6-238P-201ENST00000363313 ZBTB48P10074 688 aaPredicted RBP3.59□□□□□ -1.83
RNU6-238P-201ENST00000363313 IRF9Q00978 393 aa3.59□□□□□ -1.83
RNU6-238P-201ENST00000363313 SLC6A3Q01959 620 aa3.59□□□□□ -1.83
RNU6-238P-201ENST00000363313 FOXF2Q12947 444 aa3.59□□□□□ -1.83
RNU6-238P-201ENST00000363313 TTC38Q5R3I4 469 aa3.59□□□□□ -1.83
RNU6-238P-201ENST00000363313 SLFN12LQ6IEE8 588 aa3.59□□□□□ -1.83
RNU6-238P-201ENST00000363313 BRAPQ7Z569 592 aa3.59□□□□□ -1.83
RNU6-238P-201ENST00000363313 PLXDC1Q8IUK5 500 aa3.59□□□□□ -1.83
RNU6-238P-201ENST00000363313 SRRM1Q8IYB3 904 aaKnown RBP3.59□□□□□ -1.83
RNU6-238P-201ENST00000363313 SLC43A3Q8NBI5 491 aa3.59□□□□□ -1.83
RNU6-238P-201ENST00000363313 GSTCDQ8NEC7 633 aa3.59□□□□□ -1.83
RNU6-238P-201ENST00000363313 SCARB1Q8WTV0 552 aa3.59□□□□□ -1.83
RNU6-238P-201ENST00000363313 SMG7Q92540 1137 aaKnown RBP3.59□□□□□ -1.83
RNU6-238P-201ENST00000363313 CAVIN3Q969G5 261 aa3.59□□□□□ -1.83
RNU6-238P-201ENST00000363313 MAGEB10Q96LZ2 347 aaPredicted RBP3.59□□□□□ -1.83
RNU6-238P-201ENST00000363313 CPPED1Q9BRF8 314 aaPredicted RBP3.59□□□□□ -1.83
RNU6-238P-201ENST00000363313 LRFN3Q9BTN0 628 aa3.59□□□□□ -1.83
RNU6-238P-201ENST00000363313 SPATA5L1Q9BVQ7 753 aa3.59□□□□□ -1.83
RNU6-238P-201ENST00000363313 BOCQ9BWV1 1114 aa3.59□□□□□ -1.83
RNU6-238P-201ENST00000363313 BRIP1Q9BX63 1249 aa3.59□□□□□ -1.83
RNU6-238P-201ENST00000363313 MSRB2Q9Y3D2 182 aa3.59□□□□□ -1.83
RNU6-238P-201ENST00000363313 SETD1BQ9UPS6 1966 aaKnown RBP3.58□□□□□ -1.84
RNU6-238P-201ENST00000363313 A0A0A6YYJ9 748 aa3.58□□□□□ -1.84
RNU6-238P-201ENST00000363313 KCNQ2O43526 872 aa3.58□□□□□ -1.84
RNU6-238P-201ENST00000363313 DNAJC6O75061 913 aa3.58□□□□□ -1.84
RNU6-238P-201ENST00000363313 RASGRP1O95267 797 aa3.58□□□□□ -1.84
RNU6-238P-201ENST00000363313 HK1P19367 917 aa3.58□□□□□ -1.84
RNU6-238P-201ENST00000363313 CXCR5P32302 372 aa3.58□□□□□ -1.84
RNU6-238P-201ENST00000363313 RGS3P49796 1198 aa3.58□□□□□ -1.84
RNU6-238P-201ENST00000363313 MFAP1P55081 439 aaKnown RBP3.58□□□□□ -1.84
RNU6-238P-201ENST00000363313 ADCY1Q08828 1119 aa3.58□□□□□ -1.84
RNU6-238P-201ENST00000363313 RASGRF1Q13972 1273 aa3.58□□□□□ -1.84
RNU6-238P-201ENST00000363313 BEAN1Q3B7T3 259 aa3.58□□□□□ -1.84
RNU6-238P-201ENST00000363313 TRIM61Q5EBN2 209 aa3.58□□□□□ -1.84
RNU6-238P-201ENST00000363313 FAM209AQ5JX71 171 aa3.58□□□□□ -1.84
RNU6-238P-201ENST00000363313 DRICH1Q6PGQ1 229 aaPredicted RBP3.58□□□□□ -1.84
RNU6-238P-201ENST00000363313 GDF7Q7Z4P5 450 aa3.58□□□□□ -1.84
RNU6-238P-201ENST00000363313 CISD2Q8N5K1 135 aaKnown RBP3.58□□□□□ -1.84
RNU6-238P-201ENST00000363313 C2orf69Q8N8R5 385 aa3.58□□□□□ -1.84
RNU6-238P-201ENST00000363313 BOLLQ8N9W6 283 aaKnown RBP3.58□□□□□ -1.84
RNU6-238P-201ENST00000363313 C9orf106Q8NAJ2 232 aa3.58□□□□□ -1.84
RNU6-238P-201ENST00000363313 PITHD1Q9GZP4 211 aaPredicted RBP3.58□□□□□ -1.84
RNU6-238P-201ENST00000363313 ALG13Q9NP73 1137 aaKnown RBP3.58□□□□□ -1.84
RNU6-238P-201ENST00000363313 AKIP1Q9NQ31 210 aa3.58□□□□□ -1.84
RNU6-238P-201ENST00000363313 KMT5AQ9NQR1 393 aa3.58□□□□□ -1.84
RNU6-238P-201ENST00000363313 KIAA1522Q9P206 1035 aaPredicted RBP3.58□□□□□ -1.84
RNU6-238P-201ENST00000363313 COL3A1P02461 1466 aaPredicted RBP3.58□□□□□ -1.84
RNU6-238P-201ENST00000363313 CCDC163A0A0D9SF12 145 aa3.57□□□□□ -1.84
RNU6-238P-201ENST00000363313 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.57□□□□□ -1.84
RNU6-238P-201ENST00000363313 UBA6A0AVT1 1052 aaPredicted RBP3.57□□□□□ -1.84
RNU6-238P-201ENST00000363313 PROP1O75360 226 aa3.57□□□□□ -1.84
RNU6-238P-201ENST00000363313 ERCC5P28715 1186 aaPredicted RBP3.57□□□□□ -1.84
RNU6-238P-201ENST00000363313 GUCY1B3Q02153 619 aa3.57□□□□□ -1.84
RNU6-238P-201ENST00000363313 MRPL49Q13405 166 aaKnown RBP3.57□□□□□ -1.84
RNU6-238P-201ENST00000363313 FOXB2Q5VYV0 432 aa3.57□□□□□ -1.84
RNU6-238P-201ENST00000363313 LILRA3Q8N6C8 439 aaPredicted RBP3.57□□□□□ -1.84
RNU6-238P-201ENST00000363313 PPP1R14CQ8TAE6 165 aa3.57□□□□□ -1.84
RNU6-238P-201ENST00000363313 ERCC4Q92889 916 aaPredicted RBP3.57□□□□□ -1.84
RNU6-238P-201ENST00000363313 C1QTNF7Q9BXJ2 289 aa3.57□□□□□ -1.84
RNU6-238P-201ENST00000363313 CCDC113Q9H0I3 377 aa3.57□□□□□ -1.84
RNU6-238P-201ENST00000363313 ZNF768Q9H5H4 540 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms