RNA–Protein interactions for RNA: ENST00000362588.1

RNU4-35P-201, Transcript of RNA, U4 small nuclear 35, pseudogene, humanhuman

BASIC

Gene RNU4-35P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-35P-201ENST00000362588 TUFT1Q9NNX1 390 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 RGS18Q9NS28 235 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 C1orf112Q9NSG2 853 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 FAM105AQ9NUU6 356 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 DDX19AQ9NUU7 478 aaKnown RBP3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 TYW1Q9NV66 732 aaKnown RBP3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 CACNG4Q9UBN1 327 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 LRWD1Q9UFC0 647 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 KIAA1024Q9UPX6 916 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 MTMR6Q9Y217 621 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 INPP5FQ9Y2H2 1132 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 KIF3AQ9Y496 699 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 HES2Q9Y543 173 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 PCDHB7Q9Y5E2 793 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 CLIC4Q9Y696 253 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 MTCL1Q9Y4B5 1905 aaKnown RBP3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 MYO10Q9HD67 2058 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 NPHP3-ACAD11A0A0J9YXS1 232 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 SFI1A8K8P3 1242 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 F8W810 466 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 H3BNC9 293 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 H3BQ06 376 aaPredicted RBP3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 LINC01565O15544 149 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 TSPAN1O60635 241 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 ERLIN2O94905 339 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 NPTXRO95502 500 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 SSBP05455 408 aaKnown RBP eCLIP3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 ARF4P18085 180 aaPredicted RBP3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 RPA1P27694 616 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 MARCKSP29966 332 aaPredicted RBP3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 HOXA11P31270 313 aaPredicted RBP3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 ARL2P36404 184 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 BMPR1AP36894 532 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 PHKA2P46019 1235 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 AFF1P51825 1210 aaKnown RBP3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 PTENP60484 403 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 FAM189BP81408 668 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 RBM10P98175 930 aaKnown RBP3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 MAPK7Q13164 816 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 ORC2Q13416 577 aaPredicted RBP3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 PKP1Q13835 747 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 CAMK1Q14012 370 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 KARSQ15046 597 aaKnown RBP3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 PTPAQ15257 358 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 CLUL1Q15846 466 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 AMHR2Q16671 573 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 RILPL1Q5EBL4 403 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 TCEAL5Q5H9L2 206 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 PLPP4Q5VZY2 271 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 EEF1DP3Q658K8 133 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 HAUS3Q68CZ6 603 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 DTHD1Q6ZMT9 781 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 AGMOQ6ZNB7 445 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 USP49Q70CQ1 688 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 SLC24A5Q71RS6 500 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 SRGAP1Q7Z6B7 1085 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 ZNF598Q86UK7 904 aaKnown RBP3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 TMEM173Q86WV6 379 aaPredicted RBP3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 HSCBQ8IWL3 235 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 THNSL1Q8IYQ7 743 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 CMTR2Q8IYT2 770 aaKnown RBP3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 DAW1Q8N136 415 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 TMEM130Q8N3G9 435 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 COLGALT1Q8NBJ5 622 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 SMG8Q8ND04 991 aaKnown RBP3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 ERMNQ8TAM6 284 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 BCL7CQ8WUZ0 217 aaPredicted RBP3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 POF1BQ8WVV4 589 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 TCP11Q8WWU5 503 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 AUTS2Q8WXX7 1259 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 CLP1Q92989 425 aaKnown RBP3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 MRPL38Q96DV4 380 aaKnown RBP3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 ZFP42Q96MM3 310 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 CLIC6Q96NY7 704 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 CASD1Q96PB1 797 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 NACC1Q96RE7 527 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 USP28Q96RU2 1077 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 JPH2Q9BR39 696 aaPredicted RBP3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 COL25A1Q9BXS0 654 aaPredicted RBP3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 TMEM117Q9H0C3 514 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 CXCL16Q9H2A7 254 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 NXF3Q9H4D5 531 aaKnown RBP3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 IGFLR1Q9H665 355 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 CWH43Q9H720 699 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 ANKEF1Q9NU02 776 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 AGPAT5Q9NUQ2 364 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 TMEM161AQ9NX61 479 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 THEGQ9P2T0 379 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 DNAJB4Q9UDY4 337 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 DBR1Q9UK59 544 aaKnown RBP3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 PCDHB2Q9Y5E7 798 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 SCN1AP35498 2009 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 BDP1A6H8Y1 2624 aa3.86□□□□□ -1.79
RNU4-35P-201ENST00000362588 DOCK8Q8NF50 2099 aa3.85□□□□□ -1.79
RNU4-35P-201ENST00000362588 A0A0U1RQF3 1178 aa3.85□□□□□ -1.79
RNU4-35P-201ENST00000362588 C5orf67F2Z3F1 127 aa3.85□□□□□ -1.79
RNU4-35P-201ENST00000362588 DLL1O00548 723 aa3.85□□□□□ -1.79
RNU4-35P-201ENST00000362588 PER2O15055 1255 aa3.85□□□□□ -1.79
RNU4-35P-201ENST00000362588 SLC16A4O15374 487 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms