RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 EPAS1Q99814 870 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 FAM196BA6NMK8 535 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 SFI1A8K8P3 1242 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 MX2P20592 715 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 CPT1AP50416 773 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 HSP90AA5PQ58FG0 334 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 LDHDQ86WU2 507 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 ACRBPQ8NEB7 543 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 TIPINQ9BVW5 301 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 FAM96AQ9H5X1 160 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 GINM1Q9NU53 330 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 BFARQ9NZS9 450 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 CNOT8Q9UFF9 292 aaKnown RBP11.67□□□□□ -0.54
CLIP1-203ENST00000361654 PACSIN2Q9UNF0 486 aaPredicted RBP11.67□□□□□ -0.54
CLIP1-203ENST00000361654 MIF4GDA9UHW6 222 aaKnown RBP11.67□□□□□ -0.54
CLIP1-203ENST00000361654 EIF3DO15371 548 aaKnown RBP eCLIP11.67□□□□□ -0.54
CLIP1-203ENST00000361654 SKIP12755 728 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 ETF1P62495 437 aaKnown RBP11.67□□□□□ -0.54
CLIP1-203ENST00000361654 TRIM72Q6ZMU5 477 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 ARRDC4Q8NCT1 418 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 NR1H4Q96RI1 486 aaPredicted RBP11.67□□□□□ -0.54
CLIP1-203ENST00000361654 SIK2Q9H0K1 926 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 STN1Q9H668 368 aaKnown RBP11.67□□□□□ -0.54
CLIP1-203ENST00000361654 GGA3Q9NZ52 723 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 SELENONQ9NZV5 590 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 DPP7Q9UHL4 492 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 DNAJC12Q9UKB3 198 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 ENTPD3O75355 529 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 CTSHP09668 335 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 CLNS1AP54105 237 aaKnown RBP11.66□□□□□ -0.54
CLIP1-203ENST00000361654 CAPRIN1Q14444 709 aaKnown RBP11.66□□□□□ -0.54
CLIP1-203ENST00000361654 HEATR6Q6AI08 1181 aaKnown RBP11.66□□□□□ -0.54
CLIP1-203ENST00000361654 USP17L6PQ6QN14 398 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 PROM2Q8N271 834 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 NFU1Q9UMS0 254 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 PCDHB7Q9Y5E2 793 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 ZNF521Q96K83 1311 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 CYP19A1P11511 503 aaPredicted RBP11.66□□□□□ -0.54
CLIP1-203ENST00000361654 ITGA4P13612 1032 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 CCT5P48643 541 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 GTF2A2P52657 109 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 PSMC1P62191 440 aaKnown RBP11.66□□□□□ -0.54
CLIP1-203ENST00000361654 SYTL3Q4VX76 610 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 ANGEL2Q5VTE6 544 aaKnown RBP11.66□□□□□ -0.54
CLIP1-203ENST00000361654 RRM2BQ7LG56 351 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 CDKL3Q8IVW4 592 aaPredicted RBP11.66□□□□□ -0.54
CLIP1-203ENST00000361654 SEPT1Q8WYJ6 367 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 CEP95Q96GE4 821 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 ZNF512Q96ME7 567 aaPredicted RBP11.66□□□□□ -0.54
CLIP1-203ENST00000361654 SENP1Q9P0U3 644 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 PFASO15067 1338 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 ASAP2O43150 1006 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 DTNBO60941 627 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 MAP4P27816 1152 aaKnown RBP11.66□□□□□ -0.54
CLIP1-203ENST00000361654 ALDH1A3P47895 512 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 RCAN1P53805 252 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 PFKFB3Q16875 520 aaPredicted RBP11.66□□□□□ -0.54
CLIP1-203ENST00000361654 QRICH1Q2TAL8 776 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 ALKBH5Q6P6C2 394 aaKnown RBP11.66□□□□□ -0.54
CLIP1-203ENST00000361654 OOSP2Q86WS3 158 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 SFR1Q86XK3 245 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 UCMAQ8WVF2 138 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 MTBPQ96DY7 904 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 MRPL46Q9H2W6 279 aaKnown RBP11.66□□□□□ -0.54
CLIP1-203ENST00000361654 KDM4CQ9H3R0 1056 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 CYP27B1O15528 508 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 PRPF4O43172 522 aaKnown RBP eCLIP11.66□□□□□ -0.54
CLIP1-203ENST00000361654 NR3C1P04150 777 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 RGS2P41220 211 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 NME3Q13232 169 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 ARHGEF7Q14155 803 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 EPHA7Q15375 998 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 RNF149Q8NC42 400 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 APPL2Q8NEU8 664 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 SFMBT1Q9UHJ3 866 aa11.66□□□□□ -0.54
CLIP1-203ENST00000361654 GGPS1O95749 300 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 LRG1P02750 347 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 PRKCBP05771 671 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 MCAMP43121 646 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 LRRC43Q8N309 656 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 GPD1LQ8N335 351 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 TRAIPQ9BWF2 469 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 ANAPC7Q9UJX3 599 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 HEY1Q9Y5J3 304 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 AP3B1O00203 1094 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 CD4P01730 458 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 PYGBP11216 843 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 GSPT1P15170 499 aaKnown RBP11.65□□□□□ -0.54
CLIP1-203ENST00000361654 OAS2P29728 719 aaKnown RBP11.65□□□□□ -0.54
CLIP1-203ENST00000361654 USP11P51784 963 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 ESRRGP62508 458 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 LAMB3Q13751 1172 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 PDE1CQ14123 709 aaPredicted RBP11.65□□□□□ -0.54
CLIP1-203ENST00000361654 SCARF1Q14162 830 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 XKR3Q5GH77 459 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 GNASQ5JWF2 1037 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 ZBTB41Q5SVQ8 909 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 ZNF589Q86UQ0 364 aaPredicted RBP11.65□□□□□ -0.54
CLIP1-203ENST00000361654 WHAMMQ8TF30 809 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 RBAKQ9NYW8 714 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms