RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 LRRC4Q9HBW1 653 aa14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 GJA3Q9Y6H8 435 aa14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 A2MP01023 1474 aa14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 A0A1W2PQC6 194 aa14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 ZNF233A6NK53 670 aa14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 POU5F1BQ06416 359 aa14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 NOP9Q86U38 636 aaKnown RBP14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 MS4A14Q96JA4 679 aa14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 CEP170P1Q96L14 293 aa14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 KCNK16Q96T55 309 aa14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 WNT8AQ9H1J5 351 aa14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 AKAP10O43572 662 aa14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 XPOTO43592 962 aaKnown RBP14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 SNX2O60749 519 aa14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 PDE8BO95263 885 aa14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 IGBP1P78318 339 aa14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 RNPC3Q96LT9 517 aaKnown RBP14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 HEXIM2Q96MH2 286 aaKnown RBP14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 ZIM3Q96PE6 472 aa14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 BEGAINQ9BUH8 593 aa14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 TEX12Q9BXU0 123 aa14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 CYP26B1Q9NR63 512 aa14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 KLHL8Q9P2G9 620 aaPredicted RBP14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 HEY1Q9Y5J3 304 aa14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 INO80B-WBP1J3KQ70 363 aa14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 SNUPNO95149 360 aaKnown RBP14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 DDHD1Q8NEL9 900 aa14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 SNX19Q92543 992 aa14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 MXD3Q9BW11 206 aa14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 INO80BQ9C086 356 aaPredicted RBP14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 ATP6V1E1P36543 226 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 HADHAP40939 763 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 ALCAMQ13740 583 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 LONRF1Q17RB8 773 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 KIAA1755Q5JYT7 1200 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 LRRC31Q6UY01 552 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 RINLQ6ZS11 566 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 EP400NLQ6ZTU2 488 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 EXOC8Q8IYI6 725 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 ZNF555Q8NEP9 628 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 PARD3BQ8TEW8 1205 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 CYGBQ8WWM9 190 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 DBR1Q9UK59 544 aaKnown RBP14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 CPSF3Q9UKF6 684 aaKnown RBP14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 A0A1B0GW55 424 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 GOLGA8RI6L899 631 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 M0R3G1 203 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 PRKAB2O43741 272 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 PCCAP05165 728 aaPredicted RBP14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 DUX4L2P0CJ85 424 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 DUX4L3P0CJ86 424 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 DUX4L4P0CJ87 422 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 DUX4L5P0CJ88 424 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 DUX4L6P0CJ89 424 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 DUX4L7P0CJ90 424 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 COPB2P35606 906 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 PRPF18Q99633 342 aaKnown RBP14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 DUX4Q9UBX2 424 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 ATP6V1B1P15313 513 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 BLVRAP53004 296 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 FRA10AC1Q70Z53 315 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 ALKBH8Q96BT7 664 aaKnown RBP14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 BLOC1S6Q9UL45 172 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 GNAT1P11488 350 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 MECOMQ03112 1051 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 CHRNDQ07001 517 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 KCTD1Q719H9 257 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 TAGAPQ8N103 731 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 SIX6OS1Q8N1H7 587 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 DONSONQ9NYP3 566 aa14.23□□□□□ -0.13
CCDC144A-203ENST00000360495 MYOM2P54296 1465 aa14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 PIK3R2O00459 728 aa14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 NR3C1P04150 777 aa14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 TYK2P29597 1187 aa14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 TSPY1Q01534 308 aa14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 TBC1D9BQ66K14 1250 aa14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 TTC8Q8TAM2 541 aa14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 RFFLQ8WZ73 363 aa14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 GCOM2Q9BZD3 368 aaPredicted RBP14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 BHMT2Q9H2M3 363 aa14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 ZNF521Q96K83 1311 aa14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 POTEB3A0JP26 581 aa14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 FTLP02792 175 aaPredicted RBP14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 ABCD1P33897 745 aa14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 POTEBQ6S5H4 581 aa14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 ZBTB33Q86T24 672 aa14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 DDX42Q86XP3 938 aaKnown RBP eCLIP14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 PASD1Q8IV76 773 aa14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 ZNF710Q8N1W2 664 aa14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 C11orf70Q9BRQ4 267 aa14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 TRIM51Q9BSJ1 452 aa14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 CARD9Q9H257 536 aa14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 B2RBV5 119 aa14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 CDH16O75309 829 aa14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 XPAP23025 273 aaPredicted RBP14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 SLC16A2P36021 539 aa14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 KPNB1Q14974 876 aaKnown RBP14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 DLGAP5Q15398 846 aa14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 UBE2SQ16763 222 aa14.22□□□□□ -0.13
CCDC144A-203ENST00000360495 IMPG1Q17R60 797 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms