RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 ENO1P06733 434 aaKnown RBP14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 SLC39A14Q15043 492 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 GPR162Q16538 588 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 PLA2G4DQ86XP0 818 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 USP40Q9NVE5 1235 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 PALD1Q9ULE6 856 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 TMA7Q9Y2S6 64 aaKnown RBP14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 SNX24Q9Y343 169 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 EIF3HO15372 352 aaKnown RBP eCLIP14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 NCKAP1LP55160 1127 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 FKBP3Q00688 224 aaKnown RBP14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 ICA1Q05084 483 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 KRT72Q14CN4 511 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 KYAT1Q16773 422 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 ZNF790Q6PG37 636 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 ARL8AQ96BM9 186 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 TAF1DQ9H5J8 278 aaPredicted RBP14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 ABCF3Q9NUQ8 709 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 PTH1RQ03431 593 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 KDSRQ06136 332 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 IDI1Q13907 227 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 TGFBRAP1Q8WUH2 860 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 TOPORSQ9NS56 1045 aaPredicted RBP14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 ARL2BPQ9Y2Y0 163 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 KLHL38Q2WGJ6 581 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 AARS2Q5JTZ9 985 aaKnown RBP14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 EME1Q96AY2 570 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 IQCA1LA6NCM1 817 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 HSPA9P38646 679 aaKnown RBP14□□□□□ -0.17
SRGAP3-201ENST00000360413 CCT8L2Q96SF2 557 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 THAP9Q9H5L6 903 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 KIAA1586Q9HCI6 787 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 KRT17Q04695 432 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 TCP10Q12799 353 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 SPATA21Q7Z572 469 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 RGL1Q9NZL6 768 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 GCC2Q8IWJ2 1684 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 GOLGA8SH3BPF8 625 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 ALAS1P13196 640 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 HNRNPH1P31943 449 aaKnown RBP14□□□□□ -0.17
SRGAP3-201ENST00000360413 ABCE1P61221 599 aaKnown RBP14□□□□□ -0.17
SRGAP3-201ENST00000360413 GRAMD1CQ8IYS0 662 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 IFT43Q96FT9 208 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 RPF1Q9H9Y2 349 aaKnown RBP14□□□□□ -0.17
SRGAP3-201ENST00000360413 PIK3C2GO75747 1445 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 RSPH10B2B2RC85 870 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 RSPH10BP0C881 870 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 TPP2P29144 1249 aaPredicted RBP14□□□□□ -0.17
SRGAP3-201ENST00000360413 C19orf60Q96EN9 201 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 LSG1Q9H089 658 aaKnown RBP14□□□□□ -0.17
SRGAP3-201ENST00000360413 UBE2TQ9NPD8 197 aaPredicted RBP14□□□□□ -0.17
SRGAP3-201ENST00000360413 KIAA1024Q9UPX6 916 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 TTLL1O95922 423 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 ADD1P35611 737 aaKnown RBP14□□□□□ -0.17
SRGAP3-201ENST00000360413 FAM47AQ5JRC9 791 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 RHOT2Q8IXI1 618 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 INSRP06213 1382 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 MAP3K13O43283 966 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 TNFAIP2Q03169 654 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 BTKQ06187 659 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 CYFIP2Q96F07 1278 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 KMT5AQ9NQR1 393 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 INO80B-WBP1J3KQ70 363 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 RNMTO43148 476 aaKnown RBP14□□□□□ -0.17
SRGAP3-201ENST00000360413 SNUPNO95149 360 aaKnown RBP14□□□□□ -0.17
SRGAP3-201ENST00000360413 ALDH18A1P54886 795 aaKnown RBP14□□□□□ -0.17
SRGAP3-201ENST00000360413 PPARAQ07869 468 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 NAA30Q147X3 362 aaPredicted RBP14□□□□□ -0.17
SRGAP3-201ENST00000360413 AGGF1Q8N302 714 aaeCLIP14□□□□□ -0.17
SRGAP3-201ENST00000360413 COG1Q8WTW3 980 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 LBHD1Q9BQE6 289 aaPredicted RBP14□□□□□ -0.17
SRGAP3-201ENST00000360413 ARHGEF12Q9NZN5 1544 aa14□□□□□ -0.17
SRGAP3-201ENST00000360413 RUNX1T1Q06455 604 aa13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 MTHFSDQ2M296 383 aaKnown RBP13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 MDH1BQ5I0G3 518 aa13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 RBM41Q96IZ5 413 aaKnown RBP13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 STK25O00506 426 aa13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 MDH1P40925 334 aaKnown RBP13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 GCKRQ14397 625 aa13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 MXD4Q14582 209 aaPredicted RBP13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 PPHLN1Q8NEY8 458 aaKnown RBP13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 SCFD1Q8WVM8 642 aa13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 CD248Q9HCU0 757 aa13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 KRCC1Q9NPI7 259 aaPredicted RBP13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 C6orf203Q9P0P8 240 aaPredicted RBP13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 XPO1O14980 1071 aaKnown RBP13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 EIF2S1P05198 315 aaKnown RBP13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 ABCB5Q2M3G0 1257 aa13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 SENP1Q9P0U3 644 aa13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 FNDC3AQ9Y2H6 1198 aaKnown RBP13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 INPP5AQ14642 412 aa13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 HEATR4Q86WZ0 1026 aa13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 IP6K1Q92551 441 aa13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 FAM167AQ96KS9 214 aa13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 SLC13A1Q9BZW2 595 aa13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 HACD3Q9P035 362 aa13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 TOMM70O94826 608 aa13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 CALB1P05937 261 aa13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 ABHD10Q9NUJ1 306 aa13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 UVRAGQ9P2Y5 699 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms