RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 TADA1Q96BN2 335 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 ZBED2Q9BTP6 218 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 TNKSO95271 1327 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 PRAMEP78395 509 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 TSC22D1Q15714 1073 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 GPR162Q16538 588 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 LRRC31Q6UY01 552 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 BRIP1Q9BX63 1249 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 RNPEPQ9H4A4 650 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 BLOC1S6Q9UL45 172 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 ASAP2O43150 1006 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 ALDH18A1P54886 795 aaKnown RBP18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 NDUFA5Q16718 116 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 SMARCAD1Q9H4L7 1026 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 PYCARDQ9ULZ3 195 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 PSMA4P25789 261 aaKnown RBP18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 GPT2Q8TD30 523 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 BBS2Q9BXC9 721 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 CFAP73A6NFT4 308 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 PPP3CCP48454 512 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 C16orf62Q7Z3J2 963 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 OR6B3Q8NGW1 331 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 OMA1Q96E52 524 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 TOP2BQ02880 1626 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 TSPOAP1O95153 1857 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 TSC22D2O75157 780 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 PSMA3P25788 255 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 ADD1P35611 737 aaKnown RBP18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 NCALDP61601 193 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 C16orf72Q14CZ0 275 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 KLHL38Q2WGJ6 581 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 SLC16A1P53985 500 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 RCSD1Q6JBY9 416 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 APOA5Q6Q788 366 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 SH3BP5LQ7L8J4 393 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 ZMYM4Q5VZL5 1548 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 ADGBQ8N7X0 1667 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 ANKRD65E5RJM6 399 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 OSBPP22059 807 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 CCNA1P78396 465 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 GPS1Q13098 491 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 APPL2Q8NEU8 664 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 AKAP10O43572 662 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 CLK1P49759 484 aaKnown RBP18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 C11orf74Q86VG3 221 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 TMA16Q96EY4 203 aaKnown RBP18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 FHDC1Q9C0D6 1143 aaPredicted RBP18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 HAUS5O94927 633 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 MXI1P50539 228 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 HIC1Q14526 733 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 CDH24Q86UP0 819 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 RTL3Q8N8U3 475 aaKnown RBP18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 CASP10Q92851 521 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 CACNA2D2Q9NY47 1150 aa18.35■□□□□ 0.53
CACNA1A-201ENST00000360228 CDH2P19022 906 aaPredicted RBP18.34■□□□□ 0.53
CACNA1A-201ENST00000360228 RWDD2AQ9UIY3 292 aa18.34■□□□□ 0.53
CACNA1A-201ENST00000360228 NDUFA10O95299 355 aa18.34■□□□□ 0.53
CACNA1A-201ENST00000360228 MTERF2Q49AM1 385 aa18.34■□□□□ 0.53
CACNA1A-201ENST00000360228 LOC102724159A0A0B4J2E5 919 aa18.34■□□□□ 0.53
CACNA1A-201ENST00000360228 DLGAP3O95886 979 aa18.34■□□□□ 0.53
CACNA1A-201ENST00000360228 TTLL1O95922 423 aa18.34■□□□□ 0.53
CACNA1A-201ENST00000360228 GYS2P54840 703 aa18.34■□□□□ 0.53
CACNA1A-201ENST00000360228 PWP2Q15269 919 aaKnown RBP18.34■□□□□ 0.53
CACNA1A-201ENST00000360228 CFAP43Q8NDM7 1665 aa18.34■□□□□ 0.53
CACNA1A-201ENST00000360228 APOA4P06727 396 aa18.34■□□□□ 0.53
CACNA1A-201ENST00000360228 ARHGEF6Q15052 776 aa18.34■□□□□ 0.53
CACNA1A-201ENST00000360228 KRT73Q86Y46 540 aa18.34■□□□□ 0.53
CACNA1A-201ENST00000360228 DYRK4Q9NR20 520 aa18.34■□□□□ 0.53
CACNA1A-201ENST00000360228 PCDHA4Q9UN74 947 aa18.34■□□□□ 0.53
CACNA1A-201ENST00000360228 SLC10A5Q5PT55 438 aa18.34■□□□□ 0.53
CACNA1A-201ENST00000360228 SARM1Q6SZW1 724 aa18.34■□□□□ 0.53
CACNA1A-201ENST00000360228 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.34■□□□□ 0.53
CACNA1A-201ENST00000360228 MSTO1Q9BUK6 570 aa18.34■□□□□ 0.53
CACNA1A-201ENST00000360228 DFFAO00273 331 aa18.34■□□□□ 0.53
CACNA1A-201ENST00000360228 SCN4BQ8IWT1 228 aa18.34■□□□□ 0.53
CACNA1A-201ENST00000360228 ABCB6Q9NP58 842 aa18.34■□□□□ 0.53
CACNA1A-201ENST00000360228 KLHL18O94889 574 aa18.33■□□□□ 0.53
CACNA1A-201ENST00000360228 GGCXP38435 758 aa18.33■□□□□ 0.53
CACNA1A-201ENST00000360228 MAPRE1Q15691 268 aaKnown RBP18.33■□□□□ 0.53
CACNA1A-201ENST00000360228 LRRC49Q8IUZ0 686 aa18.33■□□□□ 0.53
CACNA1A-201ENST00000360228 OR6P1Q8NGX9 317 aa18.33■□□□□ 0.53
CACNA1A-201ENST00000360228 ETNK1Q9HBU6 452 aa18.33■□□□□ 0.53
CACNA1A-201ENST00000360228 RAD18Q9NS91 495 aa18.33■□□□□ 0.53
CACNA1A-201ENST00000360228 HSPBP1Q9NZL4 362 aa18.33■□□□□ 0.53
CACNA1A-201ENST00000360228 PALMO75781 387 aa18.33■□□□□ 0.53
CACNA1A-201ENST00000360228 SURF1Q15526 300 aa18.33■□□□□ 0.53
CACNA1A-201ENST00000360228 KCTD17Q8N5Z5 321 aa18.33■□□□□ 0.53
CACNA1A-201ENST00000360228 QKIQ96PU8 341 aaKnown RBP eCLIP18.33■□□□□ 0.53
CACNA1A-201ENST00000360228 MAPRE2Q15555 327 aa18.33■□□□□ 0.53
CACNA1A-201ENST00000360228 SLFN13Q68D06 897 aa18.33■□□□□ 0.53
CACNA1A-201ENST00000360228 EMBQ6PCB8 327 aa18.33■□□□□ 0.53
CACNA1A-201ENST00000360228 ERFP50548 548 aa18.33■□□□□ 0.52
CACNA1A-201ENST00000360228 NME3Q13232 169 aa18.33■□□□□ 0.52
CACNA1A-201ENST00000360228 STAG2Q8N3U4 1231 aa18.33■□□□□ 0.52
CACNA1A-201ENST00000360228 RPAP3Q9H6T3 665 aaPredicted RBP18.33■□□□□ 0.52
CACNA1A-201ENST00000360228 NAALADL2Q58DX5 795 aa18.33■□□□□ 0.52
CACNA1A-201ENST00000360228 ARMCX6Q7L4S7 300 aa18.33■□□□□ 0.52
CACNA1A-201ENST00000360228 CENPTQ96BT3 561 aa18.33■□□□□ 0.52
CACNA1A-201ENST00000360228 AMNQ9BXJ7 453 aa18.33■□□□□ 0.52
CACNA1A-201ENST00000360228 RGS5O15539 181 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms