RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 ATP2C1P98194 919 aaPredicted RBP12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 PDE1BQ01064 536 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 THOC5Q13769 683 aaKnown RBP12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 EAPPQ56P03 285 aaPredicted RBP12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 DNAAF5Q86Y56 855 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 DQX1Q8TE96 717 aaKnown RBP12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 DGCR14Q96DF8 476 aaKnown RBP12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 CADM1Q9BY67 442 aaKnown RBP12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 STK32BQ9NY57 414 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 ZFP69BQ9UJL9 534 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 UMODL1Q5DID0 1318 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 RPTORQ8N122 1335 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 RGPD1P0DJD0 1748 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 MED1Q15648 1581 aaPredicted RBP12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 PITPNM2Q9BZ72 1349 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 PGM3O95394 542 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 HARSP12081 509 aaKnown RBP12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 TXKP42681 527 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 VPS41P49754 854 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 SERPINB8P50452 374 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 KLHL30Q0D2K2 578 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 MPP2Q14168 576 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 ARHGEF18Q6ZSZ5 1173 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 NELFCDQ8IXH7 590 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 MAML3Q96JK9 1138 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 PHF12Q96QT6 1004 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 CYTH2Q99418 400 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 MIPEPQ99797 713 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 DDX43Q9NXZ2 648 aaKnown RBP12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 TUBA8Q9NY65 449 aaPredicted RBP12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 DDX25Q9UHL0 483 aaKnown RBP12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 RTCBQ9Y3I0 505 aaKnown RBP12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 TSPOAP1O95153 1857 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 GYG2O15488 501 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 RIPK2O43353 540 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 ADCY3O60266 1144 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 KRT13P13646 458 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 ARFIP2P53365 341 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 STRN3Q13033 797 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 DNAJC3Q13217 504 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 DUPD1Q68J44 220 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 KLHL35Q6PF15 583 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 CRAMP1Q96RY5 1269 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 ECSITQ9BQ95 431 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 NAPBQ9H115 298 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 TCP11L1Q9NUJ3 509 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 CROTQ9UKG9 612 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 ANGPTL2Q9UKU9 493 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 PEAK1Q9H792 1746 aa12.22□□□□□ -0.45
SEPSECS-201ENST00000358971 PNPLA7Q6ZV29 1317 aa12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 RHOBTB3O94955 611 aa12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 TAC1P20366 129 aa12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 ATP5DP30049 168 aa12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 GEMIN4P57678 1058 aaKnown RBP12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 KIAA1755Q5JYT7 1200 aa12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 ZSWIM5Q9P217 1185 aa12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 FAF1Q9UNN5 650 aaPredicted RBP12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 ATP6V0A2Q9Y487 856 aa12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 SPATA31D1Q6ZQQ2 1576 aa12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 TLR2O60603 784 aa12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 ACSL3O95573 720 aa12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 PLCG2P16885 1265 aa12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 LIFRP42702 1097 aa12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 TNIP1Q15025 636 aa12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 MAN2A1Q16706 1144 aa12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 LMBR1LQ6UX01 489 aa12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 RBM44Q6ZP01 1051 aaKnown RBP12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 TTLL11Q8NHH1 800 aa12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 CFAP61Q8NHU2 1237 aa12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 DIS3LQ8TF46 1054 aaKnown RBP12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 GAB3Q8WWW8 586 aa12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 IRGQQ8WZA9 623 aa12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 ZMAT2Q96NC0 199 aaKnown RBP12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 STK33Q9BYT3 514 aa12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 NDUFA13Q9P0J0 144 aa12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 ARMCX3Q9UH62 379 aaPredicted RBP12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 TBK1Q9UHD2 729 aa12.21□□□□□ -0.45
SEPSECS-201ENST00000358971 NWD2Q9ULI1 1742 aa12.21□□□□□ -0.46
SEPSECS-201ENST00000358971 TMEM94Q12767 1356 aa12.21□□□□□ -0.46
SEPSECS-201ENST00000358971 IPO5O00410 1097 aaKnown RBP12.21□□□□□ -0.46
SEPSECS-201ENST00000358971 KLRC4O43908 158 aa12.21□□□□□ -0.46
SEPSECS-201ENST00000358971 CCDC22O60826 627 aa12.21□□□□□ -0.46
SEPSECS-201ENST00000358971 GSTT2P0CG29 244 aa12.21□□□□□ -0.46
SEPSECS-201ENST00000358971 GSTT2BP0CG30 244 aa12.21□□□□□ -0.46
SEPSECS-201ENST00000358971 FOXN2P32314 431 aa12.21□□□□□ -0.46
SEPSECS-201ENST00000358971 GRIA2P42262 883 aa12.21□□□□□ -0.46
SEPSECS-201ENST00000358971 STK4Q13043 487 aa12.21□□□□□ -0.46
SEPSECS-201ENST00000358971 UBE4AQ14139 1066 aa12.21□□□□□ -0.46
SEPSECS-201ENST00000358971 TRIM11Q96F44 468 aa12.21□□□□□ -0.46
SEPSECS-201ENST00000358971 TTC1Q99614 292 aa12.21□□□□□ -0.46
SEPSECS-201ENST00000358971 TMEM109Q9BVC6 243 aa12.21□□□□□ -0.46
SEPSECS-201ENST00000358971 PHTF1Q9UMS5 762 aa12.21□□□□□ -0.46
SEPSECS-201ENST00000358971 ECM29Q5VYK3 1845 aa12.2□□□□□ -0.46
SEPSECS-201ENST00000358971 TRAFD1O14545 582 aaPredicted RBP12.2□□□□□ -0.46
SEPSECS-201ENST00000358971 EXOC3O60645 756 aa12.2□□□□□ -0.46
SEPSECS-201ENST00000358971 IL9RQ01113 521 aa12.2□□□□□ -0.46
SEPSECS-201ENST00000358971 PKN1Q16512 942 aa12.2□□□□□ -0.46
SEPSECS-201ENST00000358971 ZNF362Q5T0B9 420 aaPredicted RBP12.2□□□□□ -0.46
SEPSECS-201ENST00000358971 FAM83BQ5T0W9 1011 aa12.2□□□□□ -0.46
SEPSECS-201ENST00000358971 MFSD5Q6N075 450 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms