RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 APOA5Q6Q788 366 aa4.34□□□□□ -1.72
CNGA1-201ENST00000358519 CPLX4Q7Z7G2 160 aa4.34□□□□□ -1.72
CNGA1-201ENST00000358519 CREG2Q8IUH2 290 aa4.34□□□□□ -1.72
CNGA1-201ENST00000358519 KIAA0825Q8IV33 1275 aa4.34□□□□□ -1.72
CNGA1-201ENST00000358519 CD302Q8IX05 232 aa4.34□□□□□ -1.72
CNGA1-201ENST00000358519 SYCP3Q8IZU3 236 aa4.34□□□□□ -1.72
CNGA1-201ENST00000358519 SPICE1Q8N0Z3 855 aa4.34□□□□□ -1.72
CNGA1-201ENST00000358519 ARFGAP2Q8N6H7 521 aa4.34□□□□□ -1.72
CNGA1-201ENST00000358519 TEX9Q8N6V9 391 aa4.34□□□□□ -1.72
CNGA1-201ENST00000358519 GTF3C2Q8WUA4 911 aaPredicted RBP4.34□□□□□ -1.72
CNGA1-201ENST00000358519 RUBCNQ92622 972 aa4.34□□□□□ -1.72
CNGA1-201ENST00000358519 DCPSQ96C86 337 aaKnown RBP4.34□□□□□ -1.72
CNGA1-201ENST00000358519 BICD1Q96G01 975 aa4.34□□□□□ -1.72
CNGA1-201ENST00000358519 NUP88Q99567 741 aaPredicted RBP4.34□□□□□ -1.72
CNGA1-201ENST00000358519 SLX1AQ9BQ83 275 aa4.34□□□□□ -1.72
CNGA1-201ENST00000358519 PUS7LQ9H0K6 701 aaKnown RBP4.34□□□□□ -1.72
CNGA1-201ENST00000358519 DCP1AQ9NPI6 582 aaPredicted RBP4.34□□□□□ -1.72
CNGA1-201ENST00000358519 SEC31BQ9NQW1 1179 aa4.34□□□□□ -1.72
CNGA1-201ENST00000358519 GJB4Q9NTQ9 266 aa4.34□□□□□ -1.72
CNGA1-201ENST00000358519 STIM2Q9P246 746 aa4.34□□□□□ -1.72
CNGA1-201ENST00000358519 ASB3Q9Y575 518 aa4.34□□□□□ -1.72
CNGA1-201ENST00000358519 SSC5DA1L4H1 1573 aa4.34□□□□□ -1.72
CNGA1-201ENST00000358519 RBM47A0AV96 593 aaKnown RBP4.33□□□□□ -1.72
CNGA1-201ENST00000358519 KIF28PB7ZC32 967 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 FOXP2O15409 715 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 ATP6V1G1O75348 118 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 NPTXRO95502 500 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 VIL1P09327 827 aaKnown RBP4.33□□□□□ -1.72
CNGA1-201ENST00000358519 FAM153BP0C7A2 387 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 SNHG28P0DPA3 235 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 TMOD1P28289 359 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 GNA11P29992 359 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 ALDH3A1P30838 453 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 TUBP50607 506 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 VAV2P52735 878 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 POLE2P56282 527 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 TMEM62Q0P6H9 643 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 PAK2Q13177 524 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 IRF5Q13568 498 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 MYBPC3Q14896 1274 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 SETDB1Q15047 1291 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 TAF11Q15544 211 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 FAM153CQ494X1 144 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 CCDC38Q502W7 563 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 TMEM67Q5HYA8 995 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 RESP18Q5W5W9 173 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 TRIM68Q6AZZ1 485 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 ANO7Q6IWH7 933 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 CNNM4Q6P4Q7 775 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 MAEAQ7L5Y9 396 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 ARMC9Q7Z3E5 817 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 ERICH1Q86X53 443 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 C1orf131Q8NDD1 294 aaKnown RBP4.33□□□□□ -1.72
CNGA1-201ENST00000358519 SPATA4Q8NEY3 305 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 KLHDC4Q8TBB5 520 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 NOC3LQ8WTT2 800 aaKnown RBP4.33□□□□□ -1.72
CNGA1-201ENST00000358519 NAF1Q96HR8 494 aaKnown RBP4.33□□□□□ -1.72
CNGA1-201ENST00000358519 ARHGEF10LQ9HCE6 1279 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 KCNMB3Q9NPA1 279 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 CUEDC1Q9NWM3 386 aaPredicted RBP4.33□□□□□ -1.72
CNGA1-201ENST00000358519 PGPEP1Q9NXJ5 209 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 FAM153AQ9UHL3 310 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 SLC12A6Q9UHW9 1150 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 KCNH3Q9ULD8 1083 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 SLC12A4Q9UP95 1085 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 ZNF330Q9Y3S2 320 aaPredicted RBP4.33□□□□□ -1.72
CNGA1-201ENST00000358519 CUL9Q8IWT3 2517 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 BAZ2AQ9UIF9 1905 aaKnown RBP4.33□□□□□ -1.72
CNGA1-201ENST00000358519 ZNF236Q9UL36 1845 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 A0A1W2PPC1 479 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 CFAP73A6NFT4 308 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 GOLGA8AA7E2F4 631 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 GOLGA8BA8MQT2 603 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 H0YGN5 161 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 IFIT3O14879 490 aaKnown RBP4.33□□□□□ -1.72
CNGA1-201ENST00000358519 TBX3O15119 743 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 CREB3O43889 395 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 FOSP01100 380 aaPredicted RBP4.33□□□□□ -1.72
CNGA1-201ENST00000358519 GSTA1P08263 222 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 ATP2A2P16615 1042 aaKnown RBP4.33□□□□□ -1.72
CNGA1-201ENST00000358519 KRT9P35527 623 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 CCNG1P51959 295 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 ZNF280AP59817 542 aaPredicted RBP4.33□□□□□ -1.72
CNGA1-201ENST00000358519 ITIH3Q06033 890 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 GABPAQ06546 454 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 SREBF2Q12772 1141 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 AP3B2Q13367 1082 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 MORC3Q14149 939 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 GRIN2CQ14957 1233 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 POSTNQ15063 836 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 CDC37Q16543 378 aaPredicted RBP4.33□□□□□ -1.72
CNGA1-201ENST00000358519 TKFCQ3LXA3 575 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 NT5DC1Q5TFE4 455 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 DESI1Q6ICB0 168 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 TATDN1Q6P1N9 297 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 XRRA1Q6P2D8 792 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 BTNL9Q6UXG8 535 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 STOX1Q6ZVD7 989 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 KRT26Q7Z3Y9 468 aa4.33□□□□□ -1.72
CNGA1-201ENST00000358519 KRT25Q7Z3Z0 450 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms