RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 CLASP2O75122 1294 aaKnown RBP11.45□□□□□ -0.58
LINC01560-201ENST00000357412 GALTP07902 379 aa11.45□□□□□ -0.58
LINC01560-201ENST00000357412 SKIP12755 728 aa11.45□□□□□ -0.58
LINC01560-201ENST00000357412 HOXA11P31270 313 aaPredicted RBP11.45□□□□□ -0.58
LINC01560-201ENST00000357412 NHLH1Q02575 133 aa11.45□□□□□ -0.58
LINC01560-201ENST00000357412 SPIRE1Q08AE8 756 aa11.45□□□□□ -0.58
LINC01560-201ENST00000357412 SMC1AQ14683 1233 aaKnown RBP11.45□□□□□ -0.58
LINC01560-201ENST00000357412 EPHA7Q15375 998 aa11.45□□□□□ -0.58
LINC01560-201ENST00000357412 NOMO2Q5JPE7 1267 aa11.45□□□□□ -0.58
LINC01560-201ENST00000357412 GLB1LQ6UWU2 654 aa11.45□□□□□ -0.58
LINC01560-201ENST00000357412 CATSPER4Q7RTX7 472 aa11.45□□□□□ -0.58
LINC01560-201ENST00000357412 C4orf19Q8IY42 314 aa11.45□□□□□ -0.58
LINC01560-201ENST00000357412 VPS52Q8N1B4 723 aa11.45□□□□□ -0.58
LINC01560-201ENST00000357412 BCL7CQ8WUZ0 217 aaPredicted RBP11.45□□□□□ -0.58
LINC01560-201ENST00000357412 PRPF31Q8WWY3 499 aaKnown RBP11.45□□□□□ -0.58
LINC01560-201ENST00000357412 SLC7A3Q8WY07 619 aa11.45□□□□□ -0.58
LINC01560-201ENST00000357412 CASP10Q92851 521 aa11.45□□□□□ -0.58
LINC01560-201ENST00000357412 TMEM143Q96AN5 459 aa11.45□□□□□ -0.58
LINC01560-201ENST00000357412 TMEM169Q96HH4 297 aa11.45□□□□□ -0.58
LINC01560-201ENST00000357412 CEP170P1Q96L14 293 aa11.45□□□□□ -0.58
LINC01560-201ENST00000357412 NRDE2Q9H7Z3 1164 aa11.45□□□□□ -0.58
LINC01560-201ENST00000357412 AGPAT5Q9NUQ2 364 aa11.45□□□□□ -0.58
LINC01560-201ENST00000357412 TBC1D13Q9NVG8 400 aa11.45□□□□□ -0.58
LINC01560-201ENST00000357412 CDH22Q9UJ99 828 aa11.45□□□□□ -0.58
LINC01560-201ENST00000357412 PPME1Q9Y570 386 aa11.45□□□□□ -0.58
LINC01560-201ENST00000357412 COL4A3BPQ9Y5P4 624 aa11.45□□□□□ -0.58
LINC01560-201ENST00000357412 FAM205CA6NFA0 338 aa11.44□□□□□ -0.58
LINC01560-201ENST00000357412 B4GALT3O60512 393 aa11.44□□□□□ -0.58
LINC01560-201ENST00000357412 DKC1O60832 514 aaKnown RBP eCLIP11.44□□□□□ -0.58
LINC01560-201ENST00000357412 ZC3H11AO75152 810 aaKnown RBP eCLIP11.44□□□□□ -0.58
LINC01560-201ENST00000357412 CXCL14O95715 111 aa11.44□□□□□ -0.58
LINC01560-201ENST00000357412 FDPSP14324 419 aaKnown RBP11.44□□□□□ -0.58
LINC01560-201ENST00000357412 XBP1P17861 261 aa11.44□□□□□ -0.58
LINC01560-201ENST00000357412 YWHABP31946 246 aaKnown RBP11.44□□□□□ -0.58
LINC01560-201ENST00000357412 RAB27AP51159 221 aa11.44□□□□□ -0.58
LINC01560-201ENST00000357412 UBXN11Q5T124 520 aa11.44□□□□□ -0.58
LINC01560-201ENST00000357412 AGMOQ6ZNB7 445 aa11.44□□□□□ -0.58
LINC01560-201ENST00000357412 SRGAP1Q7Z6B7 1085 aa11.44□□□□□ -0.58
LINC01560-201ENST00000357412 ALYREFQ86V81 257 aaKnown RBP11.44□□□□□ -0.58
LINC01560-201ENST00000357412 ZNF280BQ86YH2 543 aa11.44□□□□□ -0.58
LINC01560-201ENST00000357412 TNFRSF25Q93038 417 aa11.44□□□□□ -0.58
LINC01560-201ENST00000357412 PBXIP1Q96AQ6 731 aa11.44□□□□□ -0.58
LINC01560-201ENST00000357412 IGSF21Q96ID5 467 aa11.44□□□□□ -0.58
LINC01560-201ENST00000357412 LXNQ9BS40 222 aa11.44□□□□□ -0.58
LINC01560-201ENST00000357412 ZBP1Q9H171 429 aa11.44□□□□□ -0.58
LINC01560-201ENST00000357412 ADAM7Q9H2U9 754 aa11.44□□□□□ -0.58
LINC01560-201ENST00000357412 MINDY3Q9H8M7 445 aa11.44□□□□□ -0.58
LINC01560-201ENST00000357412 RGL1Q9NZL6 768 aa11.44□□□□□ -0.58
LINC01560-201ENST00000357412 INPP5FQ9Y2H2 1132 aa11.44□□□□□ -0.58
LINC01560-201ENST00000357412 PCDHB2Q9Y5E7 798 aa11.44□□□□□ -0.58
LINC01560-201ENST00000357412 IRAK3Q9Y616 596 aa11.44□□□□□ -0.58
LINC01560-201ENST00000357412 DOCK5Q9H7D0 1870 aa11.44□□□□□ -0.58
LINC01560-201ENST00000357412 ZBTB39O15060 712 aa11.43□□□□□ -0.58
LINC01560-201ENST00000357412 SRGAP2CP0DJJ0 459 aa11.43□□□□□ -0.58
LINC01560-201ENST00000357412 CTSAP10619 480 aa11.43□□□□□ -0.58
LINC01560-201ENST00000357412 RFC5P40937 340 aa11.43□□□□□ -0.58
LINC01560-201ENST00000357412 SLC11A1P49279 550 aa11.43□□□□□ -0.58
LINC01560-201ENST00000357412 AFF1P51825 1210 aaKnown RBP11.43□□□□□ -0.58
LINC01560-201ENST00000357412 POLGP54098 1239 aaPredicted RBP11.43□□□□□ -0.58
LINC01560-201ENST00000357412 AK2P54819 239 aa11.43□□□□□ -0.58
LINC01560-201ENST00000357412 ANAPC15P60006 121 aa11.43□□□□□ -0.58
LINC01560-201ENST00000357412 SIGLEC14Q08ET2 396 aa11.43□□□□□ -0.58
LINC01560-201ENST00000357412 LAMTOR4Q0VGL1 99 aa11.43□□□□□ -0.58
LINC01560-201ENST00000357412 NR5A1Q13285 461 aa11.43□□□□□ -0.58
LINC01560-201ENST00000357412 CTTNQ14247 550 aaKnown RBP11.43□□□□□ -0.58
LINC01560-201ENST00000357412 PTPN21Q16825 1174 aa11.43□□□□□ -0.58
LINC01560-201ENST00000357412 TPRNQ4KMQ1 711 aa11.43□□□□□ -0.58
LINC01560-201ENST00000357412 IER5LQ5T953 404 aa11.43□□□□□ -0.58
LINC01560-201ENST00000357412 MRPL10Q7Z7H8 261 aaKnown RBP11.43□□□□□ -0.58
LINC01560-201ENST00000357412 DDX53Q86TM3 631 aaKnown RBP11.43□□□□□ -0.58
LINC01560-201ENST00000357412 EXOC8Q8IYI6 725 aa11.43□□□□□ -0.58
LINC01560-201ENST00000357412 PSPC1Q8WXF1 523 aaKnown RBP11.43□□□□□ -0.58
LINC01560-201ENST00000357412 AUTS2Q8WXX7 1259 aa11.43□□□□□ -0.58
LINC01560-201ENST00000357412 PGBD4Q96DM1 585 aa11.43□□□□□ -0.58
LINC01560-201ENST00000357412 ASIC4Q96FT7 647 aa11.43□□□□□ -0.58
LINC01560-201ENST00000357412 DYDC2Q96IM9 177 aa11.43□□□□□ -0.58
LINC01560-201ENST00000357412 NAP1L4Q99733 375 aaKnown RBP11.43□□□□□ -0.58
LINC01560-201ENST00000357412 VN1R3Q9BXE9 311 aa11.43□□□□□ -0.58
LINC01560-201ENST00000357412 ZSWIM4Q9H7M6 989 aa11.43□□□□□ -0.58
LINC01560-201ENST00000357412 XPNPEP1Q9NQW7 623 aa11.43□□□□□ -0.58
LINC01560-201ENST00000357412 BMP2KQ9NSY1 1161 aaPredicted RBP11.43□□□□□ -0.58
LINC01560-201ENST00000357412 ORC3Q9UBD5 711 aaPredicted RBP11.43□□□□□ -0.58
LINC01560-201ENST00000357412 DNAJB4Q9UDY4 337 aa11.43□□□□□ -0.58
LINC01560-201ENST00000357412 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.42□□□□□ -0.58
LINC01560-201ENST00000357412 CARNS1A5YM72 827 aa11.42□□□□□ -0.58
LINC01560-201ENST00000357412 DDHD2O94830 711 aa11.42□□□□□ -0.58
LINC01560-201ENST00000357412 SLITRK3O94933 977 aa11.42□□□□□ -0.58
LINC01560-201ENST00000357412 SP100P23497 879 aaPredicted RBP11.42□□□□□ -0.58
LINC01560-201ENST00000357412 CYP4A11Q02928 519 aa11.42□□□□□ -0.58
LINC01560-201ENST00000357412 ITIH3Q06033 890 aa11.42□□□□□ -0.58
LINC01560-201ENST00000357412 GIT2Q14161 759 aa11.42□□□□□ -0.58
LINC01560-201ENST00000357412 BMS1Q14692 1282 aaKnown RBP11.42□□□□□ -0.58
LINC01560-201ENST00000357412 EMC2Q15006 297 aa11.42□□□□□ -0.58
LINC01560-201ENST00000357412 ME3Q16798 604 aa11.42□□□□□ -0.58
LINC01560-201ENST00000357412 NCAPH2Q6IBW4 605 aa11.42□□□□□ -0.58
LINC01560-201ENST00000357412 OTUD6AQ7L8S5 288 aa11.42□□□□□ -0.58
LINC01560-201ENST00000357412 FERMT3Q86UX7 667 aa11.42□□□□□ -0.58
LINC01560-201ENST00000357412 C12orf76Q8N812 135 aaPredicted RBP11.42□□□□□ -0.58
LINC01560-201ENST00000357412 NECAB1Q8N987 351 aa11.42□□□□□ -0.58
LINC01560-201ENST00000357412 RNF149Q8NC42 400 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms