RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 PPME1Q9Y570 386 aa11.93□□□□□ -0.5
CAPN3-204ENST00000356316 EML1O00423 815 aa11.92□□□□□ -0.5
CAPN3-204ENST00000356316 FSCN2O14926 492 aa11.92□□□□□ -0.5
CAPN3-204ENST00000356316 CXCL14O95715 111 aa11.92□□□□□ -0.5
CAPN3-204ENST00000356316 GLP2RO95838 553 aa11.92□□□□□ -0.5
CAPN3-204ENST00000356316 SRGAP2CP0DJJ0 459 aa11.92□□□□□ -0.5
CAPN3-204ENST00000356316 HOXB8P17481 243 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-204ENST00000356316 KRT2P35908 639 aa11.92□□□□□ -0.5
CAPN3-204ENST00000356316 PBX3P40426 434 aa11.92□□□□□ -0.5
CAPN3-204ENST00000356316 RFC5P40937 340 aa11.92□□□□□ -0.5
CAPN3-204ENST00000356316 TECP42680 631 aa11.92□□□□□ -0.5
CAPN3-204ENST00000356316 RAB27AP51159 221 aa11.92□□□□□ -0.5
CAPN3-204ENST00000356316 AK2P54819 239 aa11.92□□□□□ -0.5
CAPN3-204ENST00000356316 BCAR1P56945 870 aa11.92□□□□□ -0.5
CAPN3-204ENST00000356316 EPHA7Q15375 998 aa11.92□□□□□ -0.5
CAPN3-204ENST00000356316 HERC4Q5GLZ8 1057 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-204ENST00000356316 PLA2G4FQ68DD2 849 aa11.92□□□□□ -0.5
CAPN3-204ENST00000356316 NCAPH2Q6IBW4 605 aa11.92□□□□□ -0.5
CAPN3-204ENST00000356316 LLGL2Q6P1M3 1020 aa11.92□□□□□ -0.5
CAPN3-204ENST00000356316 TMEM184AQ6ZMB5 413 aa11.92□□□□□ -0.5
CAPN3-204ENST00000356316 MRPL43Q8N983 215 aaKnown RBP11.92□□□□□ -0.5
CAPN3-204ENST00000356316 PRPF31Q8WWY3 499 aaKnown RBP11.92□□□□□ -0.5
CAPN3-204ENST00000356316 PSPC1Q8WXF1 523 aaKnown RBP11.92□□□□□ -0.5
CAPN3-204ENST00000356316 TMEM169Q96HH4 297 aa11.92□□□□□ -0.5
CAPN3-204ENST00000356316 RPGRIP1Q96KN7 1286 aa11.92□□□□□ -0.5
CAPN3-204ENST00000356316 MFSD14AQ96MC6 490 aa11.92□□□□□ -0.5
CAPN3-204ENST00000356316 TRAIPQ9BWF2 469 aa11.92□□□□□ -0.5
CAPN3-204ENST00000356316 PHF7Q9BWX1 381 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-204ENST00000356316 ZSWIM4Q9H7M6 989 aa11.92□□□□□ -0.5
CAPN3-204ENST00000356316 KCNMB3Q9NPA1 279 aa11.92□□□□□ -0.5
CAPN3-204ENST00000356316 RNF19AQ9NV58 838 aa11.92□□□□□ -0.5
CAPN3-204ENST00000356316 PPP4R2Q9NY27 417 aa11.92□□□□□ -0.5
CAPN3-204ENST00000356316 VAV3Q9UKW4 847 aa11.92□□□□□ -0.5
CAPN3-204ENST00000356316 COL4A3BPQ9Y5P4 624 aa11.92□□□□□ -0.5
CAPN3-204ENST00000356316 HIDE1A8MVS5 230 aa11.91□□□□□ -0.5
CAPN3-204ENST00000356316 NT5C1B-RDH14C9J2C7 533 aa11.91□□□□□ -0.5
CAPN3-204ENST00000356316 ASAP2O43150 1006 aa11.91□□□□□ -0.5
CAPN3-204ENST00000356316 GAS2O43903 313 aaKnown RBP11.91□□□□□ -0.5
CAPN3-204ENST00000356316 ZC3H11AO75152 810 aaKnown RBP eCLIP11.91□□□□□ -0.5
CAPN3-204ENST00000356316 ATF7P17544 494 aaPredicted RBP11.91□□□□□ -0.5
CAPN3-204ENST00000356316 YWHABP31946 246 aaKnown RBP11.91□□□□□ -0.5
CAPN3-204ENST00000356316 NPEPPSP55786 919 aa11.91□□□□□ -0.5
CAPN3-204ENST00000356316 LONRF3Q496Y0 759 aa11.91□□□□□ -0.5
CAPN3-204ENST00000356316 TPRNQ4KMQ1 711 aa11.91□□□□□ -0.5
CAPN3-204ENST00000356316 XKR9Q5GH70 373 aa11.91□□□□□ -0.5
CAPN3-204ENST00000356316 CES5AQ6NT32 575 aa11.91□□□□□ -0.5
CAPN3-204ENST00000356316 ANKRD54Q6NXT1 300 aa11.91□□□□□ -0.5
CAPN3-204ENST00000356316 SRGAP1Q7Z6B7 1085 aa11.91□□□□□ -0.5
CAPN3-204ENST00000356316 ZNF598Q86UK7 904 aaKnown RBP11.91□□□□□ -0.5
CAPN3-204ENST00000356316 TPH2Q8IWU9 490 aa11.91□□□□□ -0.5
CAPN3-204ENST00000356316 C4orf19Q8IY42 314 aa11.91□□□□□ -0.5
CAPN3-204ENST00000356316 SLC39A11Q8N1S5 342 aa11.91□□□□□ -0.5
CAPN3-204ENST00000356316 URGCPQ8TCY9 931 aa11.91□□□□□ -0.5
CAPN3-204ENST00000356316 OXER1Q8TDS5 423 aa11.91□□□□□ -0.5
CAPN3-204ENST00000356316 EDAQ92838 391 aa11.91□□□□□ -0.5
CAPN3-204ENST00000356316 CASP10Q92851 521 aa11.91□□□□□ -0.5
CAPN3-204ENST00000356316 FAM193BQ96PV7 902 aaPredicted RBP11.91□□□□□ -0.5
CAPN3-204ENST00000356316 CEP89Q96ST8 783 aa11.91□□□□□ -0.5
CAPN3-204ENST00000356316 GJB4Q9NTQ9 266 aa11.91□□□□□ -0.5
CAPN3-204ENST00000356316 FAM105AQ9NUU6 356 aa11.91□□□□□ -0.5
CAPN3-204ENST00000356316 PCDHA12Q9UN75 941 aa11.91□□□□□ -0.5
CAPN3-204ENST00000356316 INPP5FQ9Y2H2 1132 aa11.91□□□□□ -0.5
CAPN3-204ENST00000356316 LOC730098B7Z3J9 87 aa11.9□□□□□ -0.5
CAPN3-204ENST00000356316 ZNF623O75123 536 aa11.9□□□□□ -0.5
CAPN3-204ENST00000356316 PYGBP11216 843 aa11.9□□□□□ -0.5
CAPN3-204ENST00000356316 RBM10P98175 930 aaKnown RBP11.9□□□□□ -0.5
CAPN3-204ENST00000356316 LAMTOR4Q0VGL1 99 aa11.9□□□□□ -0.5
CAPN3-204ENST00000356316 GIT2Q14161 759 aa11.9□□□□□ -0.5
CAPN3-204ENST00000356316 CBX2Q14781 532 aaPredicted RBP11.9□□□□□ -0.5
CAPN3-204ENST00000356316 NOMO2Q5JPE7 1267 aa11.9□□□□□ -0.5
CAPN3-204ENST00000356316 NECAB1Q8N987 351 aa11.9□□□□□ -0.5
CAPN3-204ENST00000356316 HAS1Q92839 578 aa11.9□□□□□ -0.5
CAPN3-204ENST00000356316 LPPQ93052 612 aa11.9□□□□□ -0.5
CAPN3-204ENST00000356316 TMEM143Q96AN5 459 aa11.9□□□□□ -0.5
CAPN3-204ENST00000356316 CCDC43Q96MW1 224 aaKnown RBP11.9□□□□□ -0.5
CAPN3-204ENST00000356316 LXNQ9BS40 222 aa11.9□□□□□ -0.5
CAPN3-204ENST00000356316 DHX33Q9H6R0 707 aaKnown RBP11.9□□□□□ -0.5
CAPN3-204ENST00000356316 IFT122Q9HBG6 1241 aa11.9□□□□□ -0.5
CAPN3-204ENST00000356316 RGL1Q9NZL6 768 aa11.9□□□□□ -0.5
CAPN3-204ENST00000356316 KANSL3Q9P2N6 904 aa11.9□□□□□ -0.5
CAPN3-204ENST00000356316 STK39Q9UEW8 545 aa11.9□□□□□ -0.5
CAPN3-204ENST00000356316 PCDHB2Q9Y5E7 798 aa11.9□□□□□ -0.5
CAPN3-204ENST00000356316 WDFY4Q6ZS81 3184 aa11.89□□□□□ -0.51
CAPN3-204ENST00000356316 C2orf71A6NGG8 1288 aa11.89□□□□□ -0.51
CAPN3-204ENST00000356316 MAP3K13O43283 966 aa11.89□□□□□ -0.51
CAPN3-204ENST00000356316 GALR2O43603 387 aaPredicted RBP11.89□□□□□ -0.51
CAPN3-204ENST00000356316 DTNBO60941 627 aa11.89□□□□□ -0.51
CAPN3-204ENST00000356316 ERLIN2O94905 339 aa11.89□□□□□ -0.51
CAPN3-204ENST00000356316 CTDNEP1O95476 244 aa11.89□□□□□ -0.51
CAPN3-204ENST00000356316 ALDH2P05091 517 aa11.89□□□□□ -0.51
CAPN3-204ENST00000356316 CHRM1P11229 460 aaPredicted RBP11.89□□□□□ -0.51
CAPN3-204ENST00000356316 NEK4P51957 841 aa11.89□□□□□ -0.51
CAPN3-204ENST00000356316 CYP4A11Q02928 519 aa11.89□□□□□ -0.51
CAPN3-204ENST00000356316 NR5A1Q13285 461 aa11.89□□□□□ -0.51
CAPN3-204ENST00000356316 TFDP1Q14186 410 aa11.89□□□□□ -0.51
CAPN3-204ENST00000356316 CTTNQ14247 550 aaKnown RBP11.89□□□□□ -0.51
CAPN3-204ENST00000356316 MXD4Q14582 209 aaPredicted RBP11.89□□□□□ -0.51
CAPN3-204ENST00000356316 CALCRLQ16602 461 aa11.89□□□□□ -0.51
CAPN3-204ENST00000356316 ERICH6BQ5W0A0 696 aa11.89□□□□□ -0.51
CAPN3-204ENST00000356316 VPS52Q8N1B4 723 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms