RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 DSCC1Q9BVC3 393 aa18.32■□□□□ 0.52
COL27A1-201ENST00000356083 PITPNM3Q9BZ71 974 aa18.32■□□□□ 0.52
COL27A1-201ENST00000356083 TOPORSQ9NS56 1045 aaPredicted RBP18.32■□□□□ 0.52
COL27A1-201ENST00000356083 KDM5BQ9UGL1 1544 aa18.32■□□□□ 0.52
COL27A1-201ENST00000356083 USP17L8P0C7I0 530 aa18.32■□□□□ 0.52
COL27A1-201ENST00000356083 FAM81BQ96LP2 452 aa18.32■□□□□ 0.52
COL27A1-201ENST00000356083 ELAC2Q9BQ52 826 aaKnown RBP18.32■□□□□ 0.52
COL27A1-201ENST00000356083 ZNF556Q9HAH1 456 aa18.32■□□□□ 0.52
COL27A1-201ENST00000356083 PCDHA4Q9UN74 947 aa18.32■□□□□ 0.52
COL27A1-201ENST00000356083 EPM2AIP1Q7L775 607 aaPredicted RBP18.31■□□□□ 0.52
COL27A1-201ENST00000356083 RMDN3Q96TC7 470 aa18.31■□□□□ 0.52
COL27A1-201ENST00000356083 ZBTB40Q9NUA8 1239 aa18.31■□□□□ 0.52
COL27A1-201ENST00000356083 USP19O94966 1318 aa18.31■□□□□ 0.52
COL27A1-201ENST00000356083 UBE4BO95155 1302 aa18.31■□□□□ 0.52
COL27A1-201ENST00000356083 MTMR1Q13613 665 aa18.31■□□□□ 0.52
COL27A1-201ENST00000356083 TMEM270Q6UE05 265 aa18.31■□□□□ 0.52
COL27A1-201ENST00000356083 PIGSQ96S52 555 aa18.31■□□□□ 0.52
COL27A1-201ENST00000356083 NDE1Q9NXR1 346 aa18.31■□□□□ 0.52
COL27A1-201ENST00000356083 DEUP1Q05D60 604 aa18.31■□□□□ 0.52
COL27A1-201ENST00000356083 ZNF614Q8N883 585 aa18.31■□□□□ 0.52
COL27A1-201ENST00000356083 RPAP3Q9H6T3 665 aaPredicted RBP18.31■□□□□ 0.52
COL27A1-201ENST00000356083 ATP6V0A4Q9HBG4 840 aa18.31■□□□□ 0.52
COL27A1-201ENST00000356083 CITO14578 2027 aa18.31■□□□□ 0.52
COL27A1-201ENST00000356083 SEC31AO94979 1220 aaKnown RBP18.31■□□□□ 0.52
COL27A1-201ENST00000356083 ZBTB7AO95365 584 aa18.31■□□□□ 0.52
COL27A1-201ENST00000356083 PDIA3P30101 505 aaKnown RBP18.31■□□□□ 0.52
COL27A1-201ENST00000356083 GPC3P51654 580 aa18.31■□□□□ 0.52
COL27A1-201ENST00000356083 PCSK7Q16549 785 aa18.31■□□□□ 0.52
COL27A1-201ENST00000356083 FAM47EQ6ZV65 393 aa18.31■□□□□ 0.52
COL27A1-201ENST00000356083 TBC1D1Q86TI0 1168 aaPredicted RBP18.31■□□□□ 0.52
COL27A1-201ENST00000356083 PLEKHA8Q96JA3 519 aa18.31■□□□□ 0.52
COL27A1-201ENST00000356083 RAVER2Q9HCJ3 691 aaKnown RBP18.31■□□□□ 0.52
COL27A1-201ENST00000356083 SLAIN2Q9P270 581 aa18.31■□□□□ 0.52
COL27A1-201ENST00000356083 ARL8AQ96BM9 186 aa18.31■□□□□ 0.52
COL27A1-201ENST00000356083 CCDC17Q96LX7 622 aa18.31■□□□□ 0.52
COL27A1-201ENST00000356083 DEPDC7Q96QD5 511 aa18.31■□□□□ 0.52
COL27A1-201ENST00000356083 FAM213AQ9BRX8 229 aa18.31■□□□□ 0.52
COL27A1-201ENST00000356083 URB1O60287 2271 aaKnown RBP18.31■□□□□ 0.52
COL27A1-201ENST00000356083 RASA4BC9J798 803 aa18.3■□□□□ 0.52
COL27A1-201ENST00000356083 RASA4O43374 803 aa18.3■□□□□ 0.52
COL27A1-201ENST00000356083 PPM1NQ8N819 430 aa18.3■□□□□ 0.52
COL27A1-201ENST00000356083 DBNLQ9UJU6 430 aaKnown RBP18.3■□□□□ 0.52
COL27A1-201ENST00000356083 A0A0D9SFI3 127 aa18.3■□□□□ 0.52
COL27A1-201ENST00000356083 KDM1AO60341 852 aa18.3■□□□□ 0.52
COL27A1-201ENST00000356083 KCNV2Q8TDN2 545 aa18.3■□□□□ 0.52
COL27A1-201ENST00000356083 AGBL1Q96MI9 1066 aa18.3■□□□□ 0.52
COL27A1-201ENST00000356083 ALS2CLQ60I27 953 aa18.3■□□□□ 0.52
COL27A1-201ENST00000356083 BRD8Q9H0E9 1235 aa18.3■□□□□ 0.52
COL27A1-201ENST00000356083 EFCAB5A4FU69 1503 aa18.3■□□□□ 0.52
COL27A1-201ENST00000356083 MDM2Q00987 491 aaPredicted RBP18.3■□□□□ 0.52
COL27A1-201ENST00000356083 IL31Q6EBC2 164 aa18.3■□□□□ 0.52
COL27A1-201ENST00000356083 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.3■□□□□ 0.52
COL27A1-201ENST00000356083 CHSY1Q86X52 802 aa18.3■□□□□ 0.52
COL27A1-201ENST00000356083 OTUD5Q96G74 571 aa18.3■□□□□ 0.52
COL27A1-201ENST00000356083 RALAP11233 206 aa18.3■□□□□ 0.52
COL27A1-201ENST00000356083 BTBD8Q5XKL5 378 aa18.3■□□□□ 0.52
COL27A1-201ENST00000356083 CIAPIN1Q6FI81 312 aa18.3■□□□□ 0.52
COL27A1-201ENST00000356083 RCSD1Q6JBY9 416 aa18.3■□□□□ 0.52
COL27A1-201ENST00000356083 DHX35Q9H5Z1 703 aaKnown RBP18.3■□□□□ 0.52
COL27A1-201ENST00000356083 FAM217BQ9NTX9 383 aaPredicted RBP18.3■□□□□ 0.52
COL27A1-201ENST00000356083 PKP3Q9Y446 797 aa18.3■□□□□ 0.52
COL27A1-201ENST00000356083 TARSL2A2RTX5 802 aaKnown RBP18.3■□□□□ 0.52
COL27A1-201ENST00000356083 IYDQ6PHW0 289 aa18.3■□□□□ 0.52
COL27A1-201ENST00000356083 FKBP3Q00688 224 aaKnown RBP18.29■□□□□ 0.52
COL27A1-201ENST00000356083 SPARCL1Q14515 664 aa18.29■□□□□ 0.52
COL27A1-201ENST00000356083 DGKHQ86XP1 1220 aa18.29■□□□□ 0.52
COL27A1-201ENST00000356083 OPTNQ96CV9 577 aa18.29■□□□□ 0.52
COL27A1-201ENST00000356083 ADAM22Q9P0K1 906 aa18.29■□□□□ 0.52
COL27A1-201ENST00000356083 CRKLP46109 303 aaKnown RBP18.29■□□□□ 0.52
COL27A1-201ENST00000356083 TOMM20Q15388 145 aa18.29■□□□□ 0.52
COL27A1-201ENST00000356083 ZC3H15Q8WU90 426 aaKnown RBP18.29■□□□□ 0.52
COL27A1-201ENST00000356083 PGBD4Q96DM1 585 aa18.29■□□□□ 0.52
COL27A1-201ENST00000356083 ABCC4O15439 1325 aa18.29■□□□□ 0.52
COL27A1-201ENST00000356083 RNF123Q5XPI4 1314 aa18.29■□□□□ 0.52
COL27A1-201ENST00000356083 ZNF280CQ8ND82 737 aa18.29■□□□□ 0.52
COL27A1-201ENST00000356083 TSEN34Q9BSV6 310 aaKnown RBP18.29■□□□□ 0.52
COL27A1-201ENST00000356083 HDDC2Q7Z4H3 204 aa18.29■□□□□ 0.52
COL27A1-201ENST00000356083 CHAMP1Q96JM3 812 aa18.29■□□□□ 0.52
COL27A1-201ENST00000356083 GPBP1L1Q9HC44 474 aaPredicted RBP18.29■□□□□ 0.52
COL27A1-201ENST00000356083 LOC102724428A0A0B4J2F2 783 aa18.29■□□□□ 0.52
COL27A1-201ENST00000356083 RASSF10A6NK89 507 aa18.29■□□□□ 0.52
COL27A1-201ENST00000356083 GUCY2CP25092 1073 aa18.29■□□□□ 0.52
COL27A1-201ENST00000356083 SIK1P57059 783 aa18.29■□□□□ 0.52
COL27A1-201ENST00000356083 HPCAP84074 193 aa18.29■□□□□ 0.52
COL27A1-201ENST00000356083 TMEM62Q0P6H9 643 aa18.29■□□□□ 0.52
COL27A1-201ENST00000356083 EFHBQ8N7U6 833 aa18.29■□□□□ 0.52
COL27A1-201ENST00000356083 JADE3Q92613 823 aa18.29■□□□□ 0.52
COL27A1-201ENST00000356083 SPASTQ9UBP0 616 aa18.29■□□□□ 0.52
COL27A1-201ENST00000356083 DPYDQ12882 1025 aa18.29■□□□□ 0.52
COL27A1-201ENST00000356083 HEATR6Q6AI08 1181 aaKnown RBP18.29■□□□□ 0.52
COL27A1-201ENST00000356083 ATP11CQ8NB49 1132 aa18.29■□□□□ 0.52
COL27A1-201ENST00000356083 ICA1LQ8NDH6 482 aa18.29■□□□□ 0.52
COL27A1-201ENST00000356083 DYNLL2Q96FJ2 89 aa18.29■□□□□ 0.52
COL27A1-201ENST00000356083 KIF12Q96FN5 646 aa18.29■□□□□ 0.52
COL27A1-201ENST00000356083 KANSL2Q9H9L4 492 aa18.29■□□□□ 0.52
COL27A1-201ENST00000356083 PHKA2P46019 1235 aa18.28■□□□□ 0.52
COL27A1-201ENST00000356083 C6orf10Q5SRN2 563 aa18.28■□□□□ 0.52
COL27A1-201ENST00000356083 KRT78Q8N1N4 520 aa18.28■□□□□ 0.52
COL27A1-201ENST00000356083 TUBB6Q9BUF5 446 aa18.28■□□□□ 0.52
COL27A1-201ENST00000356083 LATS2Q9NRM7 1088 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms