RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 PGM5Q15124 567 aa13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 TRIP13Q15645 432 aaPredicted RBP13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 SNRNP35Q16560 246 aaKnown RBP13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 WDR72Q3MJ13 1102 aa13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 EP400NLQ6ZTU2 488 aa13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 SRGAP1Q7Z6B7 1085 aa13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 RPUSD2Q8IZ73 545 aaKnown RBP13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 HAUS1Q96CS2 278 aa13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 MRPL4Q9BYD3 311 aaKnown RBP13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 SNX25Q9H3E2 840 aa13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 SEMA6BQ9H3T3 888 aa13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 KCNA1Q09470 495 aa13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 GIT2Q14161 759 aa13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 GJC2Q5T442 439 aaPredicted RBP13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 EFCAB12Q6NXP0 572 aa13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 CASC4Q6P4E1 433 aa13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 NGRNQ9NPE2 291 aaKnown RBP13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 TSKSQ9UJT2 592 aa13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 PITPNM2Q9BZ72 1349 aa13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 PDHXO00330 501 aa13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 EBAG9O00559 213 aa13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 SLC25A27O95847 323 aa13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 KRT81Q14533 505 aa13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 NCAPHQ15003 741 aa13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 IL17AQ16552 155 aa13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 SLC30A5Q8TAD4 765 aa13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 RAB20Q9NX57 234 aa13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 ODF2LQ9ULJ1 636 aa13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 PIN4Q9Y237 131 aaKnown RBP13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 LRP6O75581 1613 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 OPA1O60313 960 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 DNAJC24Q6P3W2 148 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 RSRC2Q7L4I2 434 aaKnown RBP13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 GPD1LQ8N335 351 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 KIAA0895Q8NCT3 520 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 FBXL13Q8NEE6 735 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 MKL1Q969V6 931 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 IQCGQ9H095 443 aaKnown RBP13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 BLOC1S4Q9NUP1 217 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 DNAJC17Q9NVM6 304 aaKnown RBP13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 PFASO15067 1338 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 ATRNO75882 1429 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 LDHAP00338 332 aaKnown RBP13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 UCHL3P15374 230 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 FKBP1AP62942 108 aaKnown RBP13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 MKRN4PQ13434 485 aaPredicted RBP13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 FKBP1CQ5VVH2 108 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 NFRKBQ6P4R8 1299 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 CBWD2Q8IUF1 395 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 CCDC63Q8NA47 563 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 PPP1R14CQ8TAE6 165 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 RAET1EQ8TD07 263 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 HAS1Q92839 578 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 POP1Q99575 1024 aaKnown RBP13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 MRIQ9BWK5 157 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 PARD6BQ9BYG5 372 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 ADAM22Q9P0K1 906 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 CNOT8Q9UFF9 292 aaKnown RBP13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 ANAPC7Q9UJX3 599 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 COL1A1P02452 1464 aaPredicted RBP13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 GOLGA6BA6NDN3 693 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 GAS8O95995 478 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 BMP6P22004 513 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 NLRP11P59045 1033 aaKnown RBP13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 CCDC89Q8N998 374 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 HEMGNQ9BXL5 484 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 SMARCAD1Q9H4L7 1026 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 ADAM21Q9UKJ8 722 aa13.29□□□□□ -0.28
PCDHB11-201ENST00000354757 LRRD1A4D1F6 860 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 FTLP02792 175 aaPredicted RBP13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 ZNF18P17022 549 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 ADCY8P40145 1251 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 TTI2Q6NXR4 508 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 TATDN1Q6P1N9 297 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 SCFD1Q8WVM8 642 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 EPB41L5Q9HCM4 733 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 CYP2C19P33261 490 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 FMO5P49326 533 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 MYO1EQ12965 1108 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 PAK2Q13177 524 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 EXOC8Q8IYI6 725 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 KIF12Q96FN5 646 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 POLR3CQ9BUI4 534 aaPredicted RBP13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 PLCB1Q9NQ66 1216 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 RIPK3Q9Y572 518 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 TISP43B9A030 160 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 SLITRK3O94933 977 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 GH1P01241 217 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 GPC3P51654 580 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 TUBB2AQ13885 445 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 KRT71Q3SY84 523 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 C2CD6Q53TS8 623 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 DSTYKQ6XUX3 929 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 OTOP1Q7RTM1 612 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 AFG1LQ8WV93 481 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 TUBB2BQ9BVA1 445 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 AGPAT3Q9NRZ7 376 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 CAPN11Q9UMQ6 739 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 MAGED2Q9UNF1 606 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms