RNA–Protein interactions for RNA: ENST00000354500.6

TRPM3-201, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

TSL 1 (best)

Gene TRPM3, Length 4,459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-201ENST00000354500 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.1□□□□□ -0.31
TRPM3-201ENST00000354500 INTUQ9ULD6 942 aa13.1□□□□□ -0.31
TRPM3-201ENST00000354500 SPATA31A5Q5VU36 1347 aa13.1□□□□□ -0.31
TRPM3-201ENST00000354500 SPATA31A7Q8IWB4 1347 aa13.1□□□□□ -0.31
TRPM3-201ENST00000354500 RAD51CO43502 376 aa13.09□□□□□ -0.31
TRPM3-201ENST00000354500 NXNQ6DKJ4 435 aa13.09□□□□□ -0.31
TRPM3-201ENST00000354500 TRIM65Q6PJ69 517 aa13.09□□□□□ -0.31
TRPM3-201ENST00000354500 PTF1AQ7RTS3 328 aa13.09□□□□□ -0.31
TRPM3-201ENST00000354500 AGBL1Q96MI9 1066 aa13.09□□□□□ -0.31
TRPM3-201ENST00000354500 ABT1Q9ULW3 272 aaKnown RBP13.09□□□□□ -0.31
TRPM3-201ENST00000354500 SSX2IPQ9Y2D8 614 aa13.09□□□□□ -0.31
TRPM3-201ENST00000354500 PDS5AQ29RF7 1337 aaKnown RBP13.09□□□□□ -0.31
TRPM3-201ENST00000354500 MROH1Q8NDA8 1641 aa13.09□□□□□ -0.31
TRPM3-201ENST00000354500 PDXKO00764 312 aa13.09□□□□□ -0.31
TRPM3-201ENST00000354500 RFFLQ8WZ73 363 aa13.09□□□□□ -0.31
TRPM3-201ENST00000354500 OTUD5Q96G74 571 aa13.09□□□□□ -0.31
TRPM3-201ENST00000354500 ANKRD36BP1Q96IX9 119 aa13.09□□□□□ -0.31
TRPM3-201ENST00000354500 PI4K2AQ9BTU6 479 aa13.09□□□□□ -0.31
TRPM3-201ENST00000354500 PLAGL2Q9UPG8 496 aa13.09□□□□□ -0.31
TRPM3-201ENST00000354500 MED24O75448 989 aa13.09□□□□□ -0.31
TRPM3-201ENST00000354500 GBP1P32455 592 aa13.09□□□□□ -0.31
TRPM3-201ENST00000354500 SNCBQ16143 134 aa13.09□□□□□ -0.31
TRPM3-201ENST00000354500 GLE1Q53GS7 698 aaKnown RBP13.09□□□□□ -0.31
TRPM3-201ENST00000354500 TADA2BQ86TJ2 420 aa13.09□□□□□ -0.31
TRPM3-201ENST00000354500 SLC5A4Q9NY91 659 aa13.09□□□□□ -0.31
TRPM3-201ENST00000354500 HEY1Q9Y5J3 304 aa13.09□□□□□ -0.31
TRPM3-201ENST00000354500 CYTH3O43739 400 aa13.09□□□□□ -0.31
TRPM3-201ENST00000354500 H2AFXP16104 143 aaPredicted RBP13.09□□□□□ -0.31
TRPM3-201ENST00000354500 BAATQ14032 418 aaPredicted RBP13.09□□□□□ -0.31
TRPM3-201ENST00000354500 SLMAPQ14BN4 828 aa13.09□□□□□ -0.31
TRPM3-201ENST00000354500 NLRP7Q8WX94 980 aa13.09□□□□□ -0.31
TRPM3-201ENST00000354500 TMEM143Q96AN5 459 aa13.09□□□□□ -0.31
TRPM3-201ENST00000354500 ZSCAN5CA6NGD5 496 aaPredicted RBP13.08□□□□□ -0.32
TRPM3-201ENST00000354500 H0Y3Z8 333 aa13.08□□□□□ -0.32
TRPM3-201ENST00000354500 CYP11B2P19099 503 aa13.08□□□□□ -0.32
TRPM3-201ENST00000354500 MSH2P43246 934 aa13.08□□□□□ -0.32
TRPM3-201ENST00000354500 CDR2LQ86X02 465 aaPredicted RBP13.08□□□□□ -0.32
TRPM3-201ENST00000354500 CPA5Q8WXQ8 436 aa13.08□□□□□ -0.32
TRPM3-201ENST00000354500 KBTBD4Q9NVX7 518 aa13.08□□□□□ -0.32
TRPM3-201ENST00000354500 LRRIQ3A6PVS8 624 aaPredicted RBP13.08□□□□□ -0.32
TRPM3-201ENST00000354500 RASA4BC9J798 803 aa13.08□□□□□ -0.32
TRPM3-201ENST00000354500 RASA4O43374 803 aa13.08□□□□□ -0.32
TRPM3-201ENST00000354500 PSMA2P25787 234 aa13.08□□□□□ -0.32
TRPM3-201ENST00000354500 FMO5P49326 533 aa13.08□□□□□ -0.32
TRPM3-201ENST00000354500 PMS2P54278 862 aa13.08□□□□□ -0.32
TRPM3-201ENST00000354500 KRT39Q6A163 491 aa13.08□□□□□ -0.32
TRPM3-201ENST00000354500 PPP1R18Q6NYC8 613 aa13.08□□□□□ -0.32
TRPM3-201ENST00000354500 GLIS3Q8NEA6 775 aa13.08□□□□□ -0.32
TRPM3-201ENST00000354500 PYROXD1Q8WU10 500 aa13.08□□□□□ -0.32
TRPM3-201ENST00000354500 A6NJR5 290 aa13.08□□□□□ -0.32
TRPM3-201ENST00000354500 IREB2P48200 963 aaKnown RBP13.08□□□□□ -0.32
TRPM3-201ENST00000354500 PSMC6P62333 389 aa13.08□□□□□ -0.32
TRPM3-201ENST00000354500 CCNA1P78396 465 aa13.08□□□□□ -0.32
TRPM3-201ENST00000354500 MUM1Q2TAK8 710 aa13.08□□□□□ -0.32
TRPM3-201ENST00000354500 CDKAL1Q5VV42 579 aa13.08□□□□□ -0.32
TRPM3-201ENST00000354500 ARMC9Q7Z3E5 817 aa13.08□□□□□ -0.32
TRPM3-201ENST00000354500 FRMD5Q7Z6J6 570 aa13.08□□□□□ -0.32
TRPM3-201ENST00000354500 VGLL2Q8N8G2 317 aa13.08□□□□□ -0.32
TRPM3-201ENST00000354500 ATP2A3Q93084 1043 aa13.08□□□□□ -0.32
TRPM3-201ENST00000354500 ALG13Q9NP73 1137 aaKnown RBP13.08□□□□□ -0.32
TRPM3-201ENST00000354500 GPRC5CQ9NQ84 441 aa13.08□□□□□ -0.32
TRPM3-201ENST00000354500 ARHGAP20Q9P2F6 1191 aa13.08□□□□□ -0.32
TRPM3-201ENST00000354500 HPCAL4Q9UM19 191 aa13.08□□□□□ -0.32
TRPM3-201ENST00000354500 MYOM1P52179 1685 aa13.08□□□□□ -0.32
TRPM3-201ENST00000354500 MCF2LO15068 1137 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 TLR3O15455 904 aaKnown RBP13.07□□□□□ -0.32
TRPM3-201ENST00000354500 HSPA6P17066 643 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 MTMR2Q13614 643 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 LMNTD2Q8IXW0 634 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 ANKS1AQ92625 1134 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 CFAP36Q96G28 342 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 CDHR1Q96JP9 859 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 C9orf72Q96LT7 481 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 FNDC3AQ9Y2H6 1198 aaKnown RBP13.07□□□□□ -0.32
TRPM3-201ENST00000354500 NUB1Q9Y5A7 615 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 H3BQF6 201 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 PSMD14O00487 310 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 MRPS9P82933 396 aaKnown RBP13.07□□□□□ -0.32
TRPM3-201ENST00000354500 ITKQ08881 620 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 ATP6V1G3Q96LB4 118 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 ZIM3Q96PE6 472 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 RUSC1Q9BVN2 902 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 INTS13Q9NVM9 706 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 AGLP35573 1532 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 SSU72P8A0A1W2PR75 194 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 MT-ND3P03897 115 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 YWHABP31946 246 aaKnown RBP13.07□□□□□ -0.32
TRPM3-201ENST00000354500 SNX16P57768 344 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 HERVK_113P62684 666 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 EPHA7Q15375 998 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 MAP7D3Q8IWC1 876 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 BBOF1Q8ND07 529 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 PRMT6Q96LA8 375 aaPredicted RBP13.07□□□□□ -0.32
TRPM3-201ENST00000354500 AGPAT1Q99943 283 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 DCTN4Q9UJW0 460 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 PABPN1LA6NDY0 278 aaKnown RBP13.07□□□□□ -0.32
TRPM3-201ENST00000354500 PHF20L1A8MW92 1017 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 PLS3P13797 630 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 BRAFP15056 766 aa13.07□□□□□ -0.32
TRPM3-201ENST00000354500 TSNAXIP1Q2TAA8 658 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms