RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 HOOK3Q86VS8 718 aa13.12□□□□□ -0.31
DDX4-201ENST00000353507 SUGP1Q8IWZ8 645 aaKnown RBP13.12□□□□□ -0.31
DDX4-201ENST00000353507 PSMD1Q99460 953 aa13.12□□□□□ -0.31
DDX4-201ENST00000353507 LXNQ9BS40 222 aa13.12□□□□□ -0.31
DDX4-201ENST00000353507 TEKT3Q9BXF9 490 aa13.12□□□□□ -0.31
DDX4-201ENST00000353507 NR2E1Q9Y466 385 aa13.12□□□□□ -0.31
DDX4-201ENST00000353507 DHX34Q14147 1143 aaKnown RBP13.11□□□□□ -0.31
DDX4-201ENST00000353507 KIF22Q14807 665 aa13.11□□□□□ -0.31
DDX4-201ENST00000353507 PALB2Q86YC2 1186 aa13.11□□□□□ -0.31
DDX4-201ENST00000353507 CNPY4Q8N129 248 aa13.11□□□□□ -0.31
DDX4-201ENST00000353507 UBL4BQ8N7F7 174 aa13.11□□□□□ -0.31
DDX4-201ENST00000353507 ATP8B4Q8TF62 1192 aa13.11□□□□□ -0.31
DDX4-201ENST00000353507 AGPAT1Q99943 283 aa13.11□□□□□ -0.31
DDX4-201ENST00000353507 ERP44Q9BS26 406 aa13.11□□□□□ -0.31
DDX4-201ENST00000353507 UNC45AQ9H3U1 944 aa13.11□□□□□ -0.31
DDX4-201ENST00000353507 TMOD4Q9NZQ9 345 aa13.11□□□□□ -0.31
DDX4-201ENST00000353507 GGA2Q9UJY4 613 aa13.11□□□□□ -0.31
DDX4-201ENST00000353507 SPATA31A6Q5VVP1 1343 aa13.11□□□□□ -0.31
DDX4-201ENST00000353507 FAM187AA6NFU0 413 aa13.11□□□□□ -0.31
DDX4-201ENST00000353507 TMEM110-MUSTN1A8MSY1 372 aa13.11□□□□□ -0.31
DDX4-201ENST00000353507 TRAPPC3O43617 180 aa13.11□□□□□ -0.31
DDX4-201ENST00000353507 HIP1RO75146 1068 aa13.11□□□□□ -0.31
DDX4-201ENST00000353507 PPFIA2O75334 1257 aa13.11□□□□□ -0.31
DDX4-201ENST00000353507 ECE1P42892 770 aa13.11□□□□□ -0.31
DDX4-201ENST00000353507 SETQ01105 290 aaPredicted RBP13.11□□□□□ -0.31
DDX4-201ENST00000353507 CCDC121Q6ZUS5 278 aa13.11□□□□□ -0.31
DDX4-201ENST00000353507 NLGN1Q8N2Q7 840 aa13.11□□□□□ -0.31
DDX4-201ENST00000353507 C3orf20Q8ND61 904 aa13.11□□□□□ -0.31
DDX4-201ENST00000353507 BANK1Q8NDB2 785 aa13.11□□□□□ -0.31
DDX4-201ENST00000353507 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.11□□□□□ -0.31
DDX4-201ENST00000353507 ERVK-5Q9HDB9 667 aa13.11□□□□□ -0.31
DDX4-201ENST00000353507 UBE2TQ9NPD8 197 aaPredicted RBP13.11□□□□□ -0.31
DDX4-201ENST00000353507 WRAP73Q9P2S5 460 aaPredicted RBP13.11□□□□□ -0.31
DDX4-201ENST00000353507 ATRNL1Q5VV63 1379 aa13.11□□□□□ -0.31
DDX4-201ENST00000353507 EMSYQ7Z589 1322 aa13.1□□□□□ -0.31
DDX4-201ENST00000353507 FOXN3O00409 490 aaPredicted RBP13.1□□□□□ -0.31
DDX4-201ENST00000353507 ENTPD3O75355 529 aa13.1□□□□□ -0.31
DDX4-201ENST00000353507 TRIM37O94972 964 aa13.1□□□□□ -0.31
DDX4-201ENST00000353507 HNRNPH1P31943 449 aaKnown RBP13.1□□□□□ -0.31
DDX4-201ENST00000353507 SPDYCQ5MJ68 293 aa13.1□□□□□ -0.31
DDX4-201ENST00000353507 PHLDB3Q6NSJ2 640 aa13.1□□□□□ -0.31
DDX4-201ENST00000353507 TEX2Q8IWB9 1127 aa13.1□□□□□ -0.31
DDX4-201ENST00000353507 COG5Q9UP83 839 aa13.1□□□□□ -0.31
DDX4-201ENST00000353507 PFASO15067 1338 aa13.1□□□□□ -0.31
DDX4-201ENST00000353507 MIF4GDA9UHW6 222 aaKnown RBP13.1□□□□□ -0.31
DDX4-201ENST00000353507 DDX39AO00148 427 aaKnown RBP13.1□□□□□ -0.31
DDX4-201ENST00000353507 GUCY2CP25092 1073 aa13.1□□□□□ -0.31
DDX4-201ENST00000353507 INTS8Q75QN2 995 aaKnown RBP13.1□□□□□ -0.31
DDX4-201ENST00000353507 MAEAQ7L5Y9 396 aa13.1□□□□□ -0.31
DDX4-201ENST00000353507 JAMLQ86YT9 394 aa13.1□□□□□ -0.31
DDX4-201ENST00000353507 SLC9A9Q8IVB4 645 aa13.1□□□□□ -0.31
DDX4-201ENST00000353507 PRPF38AQ8NAV1 312 aaKnown RBP13.1□□□□□ -0.31
DDX4-201ENST00000353507 NEK9Q8TD19 979 aa13.1□□□□□ -0.31
DDX4-201ENST00000353507 SLC20A1Q8WUM9 679 aa13.1□□□□□ -0.31
DDX4-201ENST00000353507 GLG1Q92896 1179 aa13.1□□□□□ -0.31
DDX4-201ENST00000353507 CNOT10Q9H9A5 744 aaKnown RBP13.1□□□□□ -0.31
DDX4-201ENST00000353507 ZNF219Q9P2Y4 722 aaPredicted RBP13.1□□□□□ -0.31
DDX4-201ENST00000353507 CNOT8Q9UFF9 292 aaKnown RBP13.1□□□□□ -0.31
DDX4-201ENST00000353507 SYNPO2Q9UMS6 1093 aa13.1□□□□□ -0.31
DDX4-201ENST00000353507 MRPL11Q9Y3B7 192 aaKnown RBP13.1□□□□□ -0.31
DDX4-201ENST00000353507 ALG6Q9Y672 507 aa13.1□□□□□ -0.31
DDX4-201ENST00000353507 DCDC2CA8MYV0 355 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 TULP1O00294 542 aaPredicted RBP13.09□□□□□ -0.31
DDX4-201ENST00000353507 ARP10275 920 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 HSPA6P17066 643 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 PLTPP55058 493 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 MAPK7Q13164 816 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 RRP1BQ14684 758 aaKnown RBP13.09□□□□□ -0.31
DDX4-201ENST00000353507 KIAA1755Q5JYT7 1200 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 SEL1L2Q5TEA6 688 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 DENND2CQ68D51 928 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 DUPD1Q68J44 220 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 ALG3Q92685 438 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 PCIF1Q9H4Z3 704 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 BCS1LQ9Y276 419 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 GOLGA6L7A0A1B0GV03 622 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 PHF2O75151 1096 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 FTLP02792 175 aaPredicted RBP13.09□□□□□ -0.31
DDX4-201ENST00000353507 MNAT1P51948 309 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 CC2D2BQ6DHV5 1058 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 C11orf63Q6NUN7 778 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 ARMC9Q7Z3E5 817 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 RAPGEF5Q92565 580 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 VTI1AQ96AJ9 217 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 CABS1Q96KC9 395 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 TMOD2Q9NZR1 351 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 LARSQ9P2J5 1176 aaKnown RBP13.09□□□□□ -0.31
DDX4-201ENST00000353507 SNX24Q9Y343 169 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 AFF2P51816 1311 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 IPO5O00410 1097 aaKnown RBP13.09□□□□□ -0.31
DDX4-201ENST00000353507 VIL1P09327 827 aaKnown RBP13.09□□□□□ -0.31
DDX4-201ENST00000353507 PAEPP09466 180 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 VCAM1P19320 739 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 FNTAP49354 379 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 VAMP7P51809 220 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 PMS2P54278 862 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 MYBPC2Q14324 1141 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 PADI6Q6TGC4 694 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 RPUSD2Q8IZ73 545 aaKnown RBP13.09□□□□□ -0.31
DDX4-201ENST00000353507 CACNA2D3Q8IZS8 1091 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms