RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 PDXKO00764 312 aa14.72□□□□□ -0.05
SMC6-201ENST00000351948 CYP26A1O43174 497 aa14.72□□□□□ -0.05
SMC6-201ENST00000351948 RHOBTB3O94955 611 aa14.72□□□□□ -0.05
SMC6-201ENST00000351948 PLS3P13797 630 aa14.72□□□□□ -0.05
SMC6-201ENST00000351948 GNA15P30679 374 aa14.72□□□□□ -0.05
SMC6-201ENST00000351948 ARL4AP40617 200 aa14.72□□□□□ -0.05
SMC6-201ENST00000351948 DUOXA2Q1HG44 320 aa14.72□□□□□ -0.05
SMC6-201ENST00000351948 HHATQ5VTY9 493 aa14.72□□□□□ -0.05
SMC6-201ENST00000351948 BPIFA3Q9BQP9 254 aa14.72□□□□□ -0.05
SMC6-201ENST00000351948 IDI2Q9BXS1 227 aa14.72□□□□□ -0.05
SMC6-201ENST00000351948 OAS2P29728 719 aaKnown RBP14.72□□□□□ -0.05
SMC6-201ENST00000351948 ATP5DP30049 168 aa14.72□□□□□ -0.05
SMC6-201ENST00000351948 ATP1A2P50993 1020 aa14.72□□□□□ -0.05
SMC6-201ENST00000351948 RUFY4Q6ZNE9 571 aa14.72□□□□□ -0.05
SMC6-201ENST00000351948 RGS16O15492 202 aaPredicted RBP14.72□□□□□ -0.05
SMC6-201ENST00000351948 NCK2O43639 380 aa14.72□□□□□ -0.05
SMC6-201ENST00000351948 CSDE1O75534 798 aaKnown RBP14.72□□□□□ -0.05
SMC6-201ENST00000351948 CRCPO75575 148 aa14.72□□□□□ -0.05
SMC6-201ENST00000351948 BASP1P80723 227 aaKnown RBP14.72□□□□□ -0.05
SMC6-201ENST00000351948 CCDC6Q16204 474 aa14.72□□□□□ -0.05
SMC6-201ENST00000351948 SHROOM1Q2M3G4 852 aaPredicted RBP14.72□□□□□ -0.05
SMC6-201ENST00000351948 TMEM35BQ8NCS4 154 aa14.72□□□□□ -0.05
SMC6-201ENST00000351948 ACAP3Q96P50 834 aa14.72□□□□□ -0.05
SMC6-201ENST00000351948 OGFRQ9NZT2 677 aa14.72□□□□□ -0.05
SMC6-201ENST00000351948 NFAT5O94916 1531 aa14.72□□□□□ -0.05
SMC6-201ENST00000351948 PASKQ96RG2 1323 aa14.72□□□□□ -0.05
SMC6-201ENST00000351948 FXR2P51116 673 aaKnown RBP eCLIP14.71□□□□□ -0.051e-6■■■■■ 27.8
SMC6-201ENST00000351948 SLC12A2P55011 1212 aa14.71□□□□□ -0.05
SMC6-201ENST00000351948 ZNF211Q13398 564 aaPredicted RBP14.71□□□□□ -0.05
SMC6-201ENST00000351948 RWDD4Q6NW29 188 aaKnown RBP14.71□□□□□ -0.05
SMC6-201ENST00000351948 GMCL1P1Q8NEA9 526 aa14.71□□□□□ -0.05
SMC6-201ENST00000351948 P2RX7Q99572 595 aaKnown RBP14.71□□□□□ -0.05
SMC6-201ENST00000351948 RIOX1Q9H6W3 641 aa14.71□□□□□ -0.05
SMC6-201ENST00000351948 ODF2LQ9ULJ1 636 aa14.71□□□□□ -0.05
SMC6-201ENST00000351948 AGAP1Q9UPQ3 857 aa14.71□□□□□ -0.05
SMC6-201ENST00000351948 EBAG9O00559 213 aa14.71□□□□□ -0.05
SMC6-201ENST00000351948 CYTH3O43739 400 aa14.71□□□□□ -0.05
SMC6-201ENST00000351948 EFNA5P52803 228 aa14.71□□□□□ -0.05
SMC6-201ENST00000351948 SOX10P56693 466 aa14.71□□□□□ -0.05
SMC6-201ENST00000351948 HERVK_113P62684 666 aa14.71□□□□□ -0.05
SMC6-201ENST00000351948 GRB10Q13322 594 aa14.71□□□□□ -0.05
SMC6-201ENST00000351948 KCTD16Q68DU8 428 aa14.71□□□□□ -0.05
SMC6-201ENST00000351948 CEP128Q6ZU80 1094 aa14.71□□□□□ -0.05
SMC6-201ENST00000351948 TRPM4Q8TD43 1214 aa14.71□□□□□ -0.05
SMC6-201ENST00000351948 SYTL5Q8TDW5 730 aaPredicted RBP14.71□□□□□ -0.05
SMC6-201ENST00000351948 JRKLQ9Y4A0 524 aa14.71□□□□□ -0.05
SMC6-201ENST00000351948 POC1B-GALNT4F8VUJ3 575 aa14.71□□□□□ -0.05
SMC6-201ENST00000351948 FTLP02792 175 aaPredicted RBP14.71□□□□□ -0.05
SMC6-201ENST00000351948 SNRNP35Q16560 246 aaKnown RBP14.71□□□□□ -0.05
SMC6-201ENST00000351948 SMAP1Q8IYB5 467 aaPredicted RBP14.71□□□□□ -0.05
SMC6-201ENST00000351948 FAM163AQ96GL9 167 aaPredicted RBP14.71□□□□□ -0.05
SMC6-201ENST00000351948 ERAP1Q9NZ08 941 aa14.71□□□□□ -0.05
SMC6-201ENST00000351948 DAAM1Q9Y4D1 1078 aa14.71□□□□□ -0.05
SMC6-201ENST00000351948 NDUFAB1O14561 156 aa14.71□□□□□ -0.06
SMC6-201ENST00000351948 FGGP02679 453 aa14.71□□□□□ -0.06
SMC6-201ENST00000351948 VIL1P09327 827 aaKnown RBP14.71□□□□□ -0.06
SMC6-201ENST00000351948 KLK7P49862 253 aa14.71□□□□□ -0.06
SMC6-201ENST00000351948 CLCN3P51790 818 aa14.71□□□□□ -0.06
SMC6-201ENST00000351948 NLRP11P59045 1033 aaKnown RBP14.71□□□□□ -0.06
SMC6-201ENST00000351948 IQCB1Q15051 598 aa14.71□□□□□ -0.06
SMC6-201ENST00000351948 DARS2Q6PI48 645 aaKnown RBP14.71□□□□□ -0.06
SMC6-201ENST00000351948 KIF9Q9HAQ2 790 aa14.71□□□□□ -0.06
SMC6-201ENST00000351948 SNX9Q9Y5X1 595 aa14.71□□□□□ -0.06
SMC6-201ENST00000351948 PDHXO00330 501 aa14.7□□□□□ -0.06
SMC6-201ENST00000351948 AGPAT5Q9NUQ2 364 aa14.7□□□□□ -0.06
SMC6-201ENST00000351948 CALCOCO1Q9P1Z2 691 aa14.7□□□□□ -0.06
SMC6-201ENST00000351948 UBE4BO95155 1302 aa14.7□□□□□ -0.06
SMC6-201ENST00000351948 SARNPP82979 210 aaKnown RBP14.7□□□□□ -0.06
SMC6-201ENST00000351948 CCDC121Q6ZUS5 278 aa14.7□□□□□ -0.06
SMC6-201ENST00000351948 NLGN2Q8NFZ4 835 aa14.7□□□□□ -0.06
SMC6-201ENST00000351948 CDCA5Q96FF9 252 aa14.7□□□□□ -0.06
SMC6-201ENST00000351948 CHP1Q99653 195 aa14.7□□□□□ -0.06
SMC6-201ENST00000351948 SPATC1LQ9H0A9 340 aa14.7□□□□□ -0.06
SMC6-201ENST00000351948 CNTN2Q02246 1040 aa14.7□□□□□ -0.06
SMC6-201ENST00000351948 PI4K2AQ9BTU6 479 aa14.7□□□□□ -0.06
SMC6-201ENST00000351948 FMN2Q9NZ56 1722 aa14.7□□□□□ -0.06
SMC6-201ENST00000351948 PSMC4P43686 418 aa14.7□□□□□ -0.06
SMC6-201ENST00000351948 CACNB2Q08289 660 aaPredicted RBP14.7□□□□□ -0.06
SMC6-201ENST00000351948 DAGLBQ8NCG7 672 aa14.7□□□□□ -0.06
SMC6-201ENST00000351948 ATP8A1Q9Y2Q0 1164 aa14.7□□□□□ -0.06
SMC6-201ENST00000351948 F5H423 210 aaPredicted RBP14.69□□□□□ -0.06
SMC6-201ENST00000351948 SLC9A1P19634 815 aa14.69□□□□□ -0.06
SMC6-201ENST00000351948 SREBF1P36956 1147 aa14.69□□□□□ -0.06
SMC6-201ENST00000351948 MTMR3Q13615 1198 aa14.69□□□□□ -0.06
SMC6-201ENST00000351948 VGLL4Q14135 290 aa14.69□□□□□ -0.06
SMC6-201ENST00000351948 MXD4Q14582 209 aaPredicted RBP14.69□□□□□ -0.06
SMC6-201ENST00000351948 CRY2Q49AN0 593 aa14.69□□□□□ -0.06
SMC6-201ENST00000351948 RNF25Q96BH1 459 aaPredicted RBP14.69□□□□□ -0.06
SMC6-201ENST00000351948 PDCD2LQ9BRP1 358 aa14.69□□□□□ -0.06
SMC6-201ENST00000351948 EFCC1Q9HA90 598 aa14.69□□□□□ -0.06
SMC6-201ENST00000351948 GPRC5DQ9NZD1 345 aa14.69□□□□□ -0.06
SMC6-201ENST00000351948 TMEM150BA6NC51 233 aa14.69□□□□□ -0.06
SMC6-201ENST00000351948 VWA5AO00534 786 aa14.69□□□□□ -0.06
SMC6-201ENST00000351948 MCF2LO15068 1137 aa14.69□□□□□ -0.06
SMC6-201ENST00000351948 SREBF2Q12772 1141 aa14.69□□□□□ -0.06
SMC6-201ENST00000351948 SLC30A5Q8TAD4 765 aa14.69□□□□□ -0.06
SMC6-201ENST00000351948 IRX2Q9BZI1 471 aaPredicted RBP14.69□□□□□ -0.06
SMC6-201ENST00000351948 KIF13AQ9H1H9 1805 aa14.69□□□□□ -0.06
SMC6-201ENST00000351948 DGKDQ16760 1214 aa14.69□□□□□ -0.06
SMC6-201ENST00000351948 C10orf76Q5T2E6 689 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms