RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 TAS2R14Q9NYV8 317 aa11.26□□□□□ -0.61
SMPD4-201ENST00000351288 CDK17Q00537 523 aa11.26□□□□□ -0.61
SMPD4-201ENST00000351288 SCARA5Q6ZMJ2 495 aa11.26□□□□□ -0.61
SMPD4-201ENST00000351288 IRF2BP2Q7Z5L9 587 aa11.26□□□□□ -0.61
SMPD4-201ENST00000351288 FAM76AQ8TAV0 307 aa11.26□□□□□ -0.61
SMPD4-201ENST00000351288 C7orf43Q8WVR3 580 aa11.26□□□□□ -0.61
SMPD4-201ENST00000351288 CASKIN2Q8WXE0 1202 aa11.26□□□□□ -0.61
SMPD4-201ENST00000351288 ATP6V0A1Q93050 837 aa11.26□□□□□ -0.61
SMPD4-201ENST00000351288 ACCSQ96QU6 501 aa11.26□□□□□ -0.61
SMPD4-201ENST00000351288 PLIN4Q96Q06 1357 aa11.26□□□□□ -0.61
SMPD4-201ENST00000351288 MYO1CO00159 1063 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 TGFB1I1O43294 461 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 ATMINO43313 823 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-201ENST00000351288 CTNND1O60716 968 aaKnown RBP11.25□□□□□ -0.61
SMPD4-201ENST00000351288 BCRP11274 1271 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 DLG4P78352 724 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 SETQ01105 290 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-201ENST00000351288 ORC2Q13416 577 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-201ENST00000351288 KCTD2Q14681 263 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 NAB2Q15742 525 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 GOLGA5Q8TBA6 731 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 AENQ8WTP8 325 aaKnown RBP11.25□□□□□ -0.61
SMPD4-201ENST00000351288 TEX13BQ9BXU2 312 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 PLCB1Q9NQ66 1216 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 AMACRQ9UHK6 382 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 PPP1R9AQ9ULJ8 1098 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 NR2E1Q9Y466 385 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 ARFGEF1Q9Y6D6 1849 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 CCDC172P0C7W6 258 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 WDR44Q5JSH3 913 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 LRRC71Q8N4P6 559 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 SLC35C1Q96A29 364 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 IMPG2Q9BZV3 1241 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 SYNCQ9H7C4 482 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 RGS17Q9UGC6 210 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-201ENST00000351288 NAGPAQ9UK23 515 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 VAV3Q9UKW4 847 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 RRP15Q9Y3B9 282 aaKnown RBP11.25□□□□□ -0.61
SMPD4-201ENST00000351288 PCDHA10Q9Y5I2 948 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 IFFO1Q0D2I5 559 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 TRIM50Q86XT4 487 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 SCYL3Q8IZE3 742 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 CEP63Q96MT8 703 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 PDCD2LQ9BRP1 358 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 ACAD9Q9H845 621 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 MED4Q9NPJ6 270 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 TOPORSQ9NS56 1045 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-201ENST00000351288 EXOC7Q9UPT5 735 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 ZNF541Q9H0D2 1346 aa11.25□□□□□ -0.61
SMPD4-201ENST00000351288 SSU72P8A0A1W2PR75 194 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 K7ERI5 159 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 EVI5O60447 810 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 GNGT1P63211 74 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 TTMPQ5BVD1 217 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 FAM83AQ86UY5 434 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 CBWD2Q8IUF1 395 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 XXYLT1Q8NBI6 393 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 LPAR1Q92633 364 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 APOL6Q9BWW8 343 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 NXF1Q9UBU9 619 aaKnown RBP11.24□□□□□ -0.61
SMPD4-201ENST00000351288 GOLGA6L10A6NI86 522 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 FLT3P36888 993 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 PSMC5P62195 406 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 TFAMQ00059 246 aaKnown RBP11.24□□□□□ -0.61
SMPD4-201ENST00000351288 PLCB3Q01970 1234 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 GUCY1A3Q02108 690 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 CPNE8Q86YQ8 564 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 MMGT1Q8N4V1 131 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 SLC30A5Q8TAD4 765 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 KAT5Q92993 513 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 MRRFQ96E11 262 aaKnown RBP11.24□□□□□ -0.61
SMPD4-201ENST00000351288 RPGRIP1Q96KN7 1286 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 JPH1Q9HDC5 661 aaPredicted RBP11.24□□□□□ -0.61
SMPD4-201ENST00000351288 HOXC10Q9NYD6 342 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 IGSF9BQ9UPX0 1349 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 TARSL2A2RTX5 802 aaKnown RBP11.24□□□□□ -0.61
SMPD4-201ENST00000351288 VWA5AO00534 786 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 DDX3XO00571 662 aaKnown RBP eCLIP11.24□□□□□ -0.612e-8■□□□□ 8.3
SMPD4-201ENST00000351288 PDXKO00764 312 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 TBX3O15119 743 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 STXBP2Q15833 593 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 IFI16Q16666 785 aaKnown RBP11.24□□□□□ -0.61
SMPD4-201ENST00000351288 CLMNQ96JQ2 1002 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 AGPAT3Q9NRZ7 376 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 TBC1D22BQ9NU19 505 aa11.24□□□□□ -0.61
SMPD4-201ENST00000351288 UBR3Q6ZT12 1888 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 KRIT1O00522 736 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 HSF2BPO75031 334 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 LCA5LO95447 670 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 TMOD1P28289 359 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 VAMP7P51809 220 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 UGCGQ16739 394 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 COBLL1Q53SF7 1204 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 UBLCP1Q8WVY7 318 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-201ENST00000351288 FHDC1Q9C0D6 1143 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-201ENST00000351288 LRRC4CQ9HCJ2 640 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 SLC9A2Q9UBY0 812 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 GSTTP1A0A1W2PQM5 241 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 PSAPP07602 524 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 GALCP54803 685 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms