RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 SCYL3Q8IZE3 742 aa19.88■□□□□ 0.77
UBE3C-201ENST00000348165 RBM41Q96IZ5 413 aaKnown RBP19.88■□□□□ 0.77
UBE3C-201ENST00000348165 BAG5Q9UL15 447 aa19.88■□□□□ 0.77
UBE3C-201ENST00000348165 NCK2O43639 380 aa19.88■□□□□ 0.77
UBE3C-201ENST00000348165 PSMC1P62191 440 aaKnown RBP19.88■□□□□ 0.77
UBE3C-201ENST00000348165 TFDP2Q14188 446 aa19.88■□□□□ 0.77
UBE3C-201ENST00000348165 ZNF564Q8TBZ8 553 aaPredicted RBP19.88■□□□□ 0.77
UBE3C-201ENST00000348165 GCNAQ96QF7 691 aa19.88■□□□□ 0.77
UBE3C-201ENST00000348165 CCSER1Q9C0I3 900 aa19.88■□□□□ 0.77
UBE3C-201ENST00000348165 ABCF3Q9NUQ8 709 aa19.88■□□□□ 0.77
UBE3C-201ENST00000348165 ASNSD1Q9NWL6 643 aa19.88■□□□□ 0.77
UBE3C-201ENST00000348165 GGPS1O95749 300 aa19.88■□□□□ 0.77
UBE3C-201ENST00000348165 TBXAS1P24557 533 aaPredicted RBP19.88■□□□□ 0.77
UBE3C-201ENST00000348165 SDC4P31431 198 aa19.88■□□□□ 0.77
UBE3C-201ENST00000348165 SSTR3P32745 418 aaPredicted RBP19.88■□□□□ 0.77
UBE3C-201ENST00000348165 CASP2P42575 452 aa19.88■□□□□ 0.77
UBE3C-201ENST00000348165 GPD1LQ8N335 351 aa19.88■□□□□ 0.77
UBE3C-201ENST00000348165 NUP85Q9BW27 656 aa19.88■□□□□ 0.77
UBE3C-201ENST00000348165 SAYSD1Q9NPB0 183 aa19.88■□□□□ 0.77
UBE3C-201ENST00000348165 KLHL8Q9P2G9 620 aaPredicted RBP19.88■□□□□ 0.77
UBE3C-201ENST00000348165 TSPY1Q01534 308 aa19.87■□□□□ 0.77
UBE3C-201ENST00000348165 DHX40Q8IX18 779 aaKnown RBP19.87■□□□□ 0.77
UBE3C-201ENST00000348165 ZNF280CQ8ND82 737 aa19.87■□□□□ 0.77
UBE3C-201ENST00000348165 TTC7AQ9ULT0 858 aaPredicted RBP19.87■□□□□ 0.77
UBE3C-201ENST00000348165 CPS1P31327 1500 aa19.87■□□□□ 0.77
UBE3C-201ENST00000348165 SMIM24O75264 130 aa19.87■□□□□ 0.77
UBE3C-201ENST00000348165 PDHBP11177 359 aa19.87■□□□□ 0.77
UBE3C-201ENST00000348165 C16orf86Q6ZW13 317 aa19.87■□□□□ 0.77
UBE3C-201ENST00000348165 USP49Q70CQ1 688 aa19.87■□□□□ 0.77
UBE3C-201ENST00000348165 TRIM42Q8IWZ5 723 aa19.87■□□□□ 0.77
UBE3C-201ENST00000348165 DEPDC1BQ8WUY9 529 aa19.87■□□□□ 0.77
UBE3C-201ENST00000348165 CHMP6Q96FZ7 201 aa19.87■□□□□ 0.77
UBE3C-201ENST00000348165 TMEM39BQ9GZU3 492 aa19.87■□□□□ 0.77
UBE3C-201ENST00000348165 GGA3Q9NZ52 723 aa19.87■□□□□ 0.77
UBE3C-201ENST00000348165 SPDYE2BA6NHP3 402 aa19.87■□□□□ 0.77
UBE3C-201ENST00000348165 SPDYE6P0CI01 402 aa19.87■□□□□ 0.77
UBE3C-201ENST00000348165 CIITAP33076 1130 aa19.87■□□□□ 0.77
UBE3C-201ENST00000348165 SERPINB6P35237 376 aa19.87■□□□□ 0.77
UBE3C-201ENST00000348165 FBXL13Q8NEE6 735 aa19.87■□□□□ 0.77
UBE3C-201ENST00000348165 LPAR1Q92633 364 aa19.87■□□□□ 0.77
UBE3C-201ENST00000348165 IL25Q9H293 177 aa19.87■□□□□ 0.77
UBE3C-201ENST00000348165 NOP9Q86U38 636 aaKnown RBP19.87■□□□□ 0.77
UBE3C-201ENST00000348165 EXOC4Q96A65 974 aa19.87■□□□□ 0.77
UBE3C-201ENST00000348165 ADGRG1Q9Y653 693 aa19.87■□□□□ 0.77
UBE3C-201ENST00000348165 CEP152O94986 1710 aa19.87■□□□□ 0.77
UBE3C-201ENST00000348165 SPATA31A5Q5VU36 1347 aa19.87■□□□□ 0.77
UBE3C-201ENST00000348165 SPATA31A7Q8IWB4 1347 aa19.87■□□□□ 0.77
UBE3C-201ENST00000348165 SYNGAP1Q96PV0 1343 aa19.87■□□□□ 0.77
UBE3C-201ENST00000348165 STX1BP61266 288 aa19.86■□□□□ 0.77
UBE3C-201ENST00000348165 FBXO38Q6PIJ6 1188 aa19.86■□□□□ 0.77
UBE3C-201ENST00000348165 BARGINQ6ZT62 677 aa19.86■□□□□ 0.77
UBE3C-201ENST00000348165 FAM151AQ8WW52 585 aa19.86■□□□□ 0.77
UBE3C-201ENST00000348165 STRIP2Q9ULQ0 834 aa19.86■□□□□ 0.77
UBE3C-201ENST00000348165 PACSIN2Q9UNF0 486 aaPredicted RBP19.86■□□□□ 0.77
UBE3C-201ENST00000348165 PTPRMP28827 1452 aa19.86■□□□□ 0.77
UBE3C-201ENST00000348165 MYO1CO00159 1063 aa19.86■□□□□ 0.77
UBE3C-201ENST00000348165 PODXLO00592 558 aa19.86■□□□□ 0.77
UBE3C-201ENST00000348165 RPSAP08865 295 aaKnown RBP19.86■□□□□ 0.77
UBE3C-201ENST00000348165 KRT3P12035 628 aa19.86■□□□□ 0.77
UBE3C-201ENST00000348165 PLS3P13797 630 aa19.86■□□□□ 0.77
UBE3C-201ENST00000348165 CUL1Q13616 776 aa19.86■□□□□ 0.77
UBE3C-201ENST00000348165 DUOXA2Q1HG44 320 aa19.86■□□□□ 0.77
UBE3C-201ENST00000348165 NFRKBQ6P4R8 1299 aa19.86■□□□□ 0.77
UBE3C-201ENST00000348165 TEX2Q8IWB9 1127 aa19.86■□□□□ 0.77
UBE3C-201ENST00000348165 TMEM143Q96AN5 459 aa19.86■□□□□ 0.77
UBE3C-201ENST00000348165 KIF12Q96FN5 646 aa19.86■□□□□ 0.77
UBE3C-201ENST00000348165 VCPKMTQ9H867 229 aa19.86■□□□□ 0.77
UBE3C-201ENST00000348165 CD163L1Q9NR16 1453 aa19.86■□□□□ 0.77
UBE3C-201ENST00000348165 A8MXQ7 604 aa19.86■□□□□ 0.77
UBE3C-201ENST00000348165 NR3C2P08235 984 aa19.86■□□□□ 0.77
UBE3C-201ENST00000348165 ADORA2BP29275 332 aa19.86■□□□□ 0.77
UBE3C-201ENST00000348165 MFSD14CQ5VZR4 134 aa19.86■□□□□ 0.77
UBE3C-201ENST00000348165 CREB3O43889 395 aa19.86■□□□□ 0.77
UBE3C-201ENST00000348165 PFDN1O60925 122 aa19.86■□□□□ 0.77
UBE3C-201ENST00000348165 KRT10P13645 584 aa19.86■□□□□ 0.77
UBE3C-201ENST00000348165 KLC2Q9H0B6 622 aa19.86■□□□□ 0.77
UBE3C-201ENST00000348165 TUFT1Q9NNX1 390 aa19.86■□□□□ 0.77
UBE3C-201ENST00000348165 SETBP1Q9Y6X0 1596 aa19.85■□□□□ 0.77
UBE3C-201ENST00000348165 GOLGA8MH3BSY2 632 aa19.85■□□□□ 0.77
UBE3C-201ENST00000348165 KLRK1P26718 216 aa19.85■□□□□ 0.77
UBE3C-201ENST00000348165 KCNB1Q14721 858 aa19.85■□□□□ 0.77
UBE3C-201ENST00000348165 RBM46Q8TBY0 533 aaKnown RBP19.85■□□□□ 0.77
UBE3C-201ENST00000348165 NR1D1P20393 614 aa19.85■□□□□ 0.77
UBE3C-201ENST00000348165 EMBQ6PCB8 327 aa19.85■□□□□ 0.77
UBE3C-201ENST00000348165 E9PCH4 1651 aa19.85■□□□□ 0.77
UBE3C-201ENST00000348165 MYO3AQ8NEV4 1616 aa19.85■□□□□ 0.77
UBE3C-201ENST00000348165 SAMD7Q7Z3H4 446 aa19.85■□□□□ 0.77
UBE3C-201ENST00000348165 DPF2Q92785 391 aa19.85■□□□□ 0.77
UBE3C-201ENST00000348165 ALS2CLQ60I27 953 aa19.84■□□□□ 0.77
UBE3C-201ENST00000348165 DDX27Q96GQ7 796 aaKnown RBP19.84■□□□□ 0.77
UBE3C-201ENST00000348165 PDXKO00764 312 aa19.84■□□□□ 0.77
UBE3C-201ENST00000348165 DPEP1P16444 411 aa19.84■□□□□ 0.77
UBE3C-201ENST00000348165 COPB2P35606 906 aa19.84■□□□□ 0.77
UBE3C-201ENST00000348165 GMPSP49915 693 aaPredicted RBP19.84■□□□□ 0.77
UBE3C-201ENST00000348165 TAF1CQ15572 869 aaPredicted RBP19.84■□□□□ 0.77
UBE3C-201ENST00000348165 RASIP1Q5U651 963 aa19.84■□□□□ 0.77
UBE3C-201ENST00000348165 DDX47Q9H0S4 455 aaKnown RBP19.84■□□□□ 0.77
UBE3C-201ENST00000348165 LMCD1Q9NZU5 365 aa19.84■□□□□ 0.77
UBE3C-201ENST00000348165 HDAC6Q9UBN7 1215 aa19.84■□□□□ 0.77
UBE3C-201ENST00000348165 SLC10A5Q5PT55 438 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms