RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 E9PMD0 336 aa23.08■■□□□ 1.29
TRIM3-201ENST00000345851 KIAA0391O15091 583 aaKnown RBP23.08■■□□□ 1.29
TRIM3-201ENST00000345851 FXR2P51116 673 aaKnown RBP eCLIP23.08■■□□□ 1.29
TRIM3-201ENST00000345851 TCP10Q12799 353 aa23.08■■□□□ 1.29
TRIM3-201ENST00000345851 NFIAQ12857 509 aa23.08■■□□□ 1.29
TRIM3-201ENST00000345851 RAB34Q9BZG1 259 aa23.08■■□□□ 1.29
TRIM3-201ENST00000345851 CCDC134Q9H6E4 229 aa23.08■■□□□ 1.29
TRIM3-201ENST00000345851 USP40Q9NVE5 1235 aa23.08■■□□□ 1.29
TRIM3-201ENST00000345851 NAV1Q8NEY1 1877 aa23.08■■□□□ 1.28
TRIM3-201ENST00000345851 FAM196BA6NMK8 535 aa23.07■■□□□ 1.28
TRIM3-201ENST00000345851 MPHOSPH10O00566 681 aaKnown RBP23.07■■□□□ 1.28
TRIM3-201ENST00000345851 CETN3O15182 167 aa23.07■■□□□ 1.28
TRIM3-201ENST00000345851 GFPT2O94808 682 aa23.07■■□□□ 1.28
TRIM3-201ENST00000345851 PON1P27169 355 aa23.07■■□□□ 1.28
TRIM3-201ENST00000345851 SNX1Q13596 522 aa23.07■■□□□ 1.28
TRIM3-201ENST00000345851 VPS36Q86VN1 386 aa23.07■■□□□ 1.28
TRIM3-201ENST00000345851 UBA5Q9GZZ9 404 aa23.07■■□□□ 1.28
TRIM3-201ENST00000345851 EMILIN3Q9NT22 766 aa23.07■■□□□ 1.28
TRIM3-201ENST00000345851 SEC63Q9UGP8 760 aaKnown RBP23.07■■□□□ 1.28
TRIM3-201ENST00000345851 GAKO14976 1311 aa23.07■■□□□ 1.28
TRIM3-201ENST00000345851 ADAMTSL1Q8N6G6 1762 aa23.07■■□□□ 1.28
TRIM3-201ENST00000345851 OAS1P00973 400 aaKnown RBP23.07■■□□□ 1.28
TRIM3-201ENST00000345851 RBM5P52756 815 aaKnown RBP eCLIP23.07■■□□□ 1.28
TRIM3-201ENST00000345851 AUHQ13825 339 aaKnown RBP23.07■■□□□ 1.28
TRIM3-201ENST00000345851 LTBP1Q14766 1721 aa23.07■■□□□ 1.28
TRIM3-201ENST00000345851 AOC3Q16853 763 aa23.07■■□□□ 1.28
TRIM3-201ENST00000345851 GNPTABQ3T906 1256 aa23.07■■□□□ 1.28
TRIM3-201ENST00000345851 SPDYCQ5MJ68 293 aa23.07■■□□□ 1.28
TRIM3-201ENST00000345851 ZFPM1Q8IX07 1006 aa23.07■■□□□ 1.28
TRIM3-201ENST00000345851 SLC35G2Q8TBE7 412 aa23.07■■□□□ 1.28
TRIM3-201ENST00000345851 CEP95Q96GE4 821 aa23.07■■□□□ 1.28
TRIM3-201ENST00000345851 IFT74Q96LB3 600 aa23.07■■□□□ 1.28
TRIM3-201ENST00000345851 ARHGEF3Q9NR81 526 aa23.07■■□□□ 1.28
TRIM3-201ENST00000345851 ZFATQ9P243 1243 aa23.07■■□□□ 1.28
TRIM3-201ENST00000345851 SLX4Q8IY92 1834 aa23.07■■□□□ 1.28
TRIM3-201ENST00000345851 IGSF9BQ9UPX0 1349 aa23.07■■□□□ 1.28
TRIM3-201ENST00000345851 RPL21P46778 160 aaKnown RBP23.07■■□□□ 1.28
TRIM3-201ENST00000345851 MKRN4PQ13434 485 aaPredicted RBP23.07■■□□□ 1.28
TRIM3-201ENST00000345851 EXOC3L1Q86VI1 746 aa23.07■■□□□ 1.28
TRIM3-201ENST00000345851 NAF1Q96HR8 494 aaKnown RBP23.07■■□□□ 1.28
TRIM3-201ENST00000345851 HOMER3Q9NSC5 361 aa23.07■■□□□ 1.28
TRIM3-201ENST00000345851 BMP2KQ9NSY1 1161 aaPredicted RBP23.07■■□□□ 1.28
TRIM3-201ENST00000345851 KLHL33A6NCF5 533 aa23.06■■□□□ 1.28
TRIM3-201ENST00000345851 MARCH6O60337 910 aa23.06■■□□□ 1.28
TRIM3-201ENST00000345851 PLCG2P16885 1265 aa23.06■■□□□ 1.28
TRIM3-201ENST00000345851 LONRF1Q17RB8 773 aa23.06■■□□□ 1.28
TRIM3-201ENST00000345851 TMEM119Q4V9L6 283 aa23.06■■□□□ 1.28
TRIM3-201ENST00000345851 RMDN2Q96LZ7 410 aa23.06■■□□□ 1.28
TRIM3-201ENST00000345851 LRRC27Q9C0I9 530 aa23.06■■□□□ 1.28
TRIM3-201ENST00000345851 KCTD10Q9H3F6 313 aa23.06■■□□□ 1.28
TRIM3-201ENST00000345851 DDX3YO15523 660 aaKnown RBP23.06■■□□□ 1.28
TRIM3-201ENST00000345851 DPY19L2P1Q6NXN4 242 aa23.06■■□□□ 1.28
TRIM3-201ENST00000345851 C16orf86Q6ZW13 317 aa23.06■■□□□ 1.28
TRIM3-201ENST00000345851 GLYCTKQ8IVS8 523 aa23.06■■□□□ 1.28
TRIM3-201ENST00000345851 CAMKK2Q96RR4 588 aa23.06■■□□□ 1.28
TRIM3-201ENST00000345851 KCNK9Q9NPC2 374 aa23.06■■□□□ 1.28
TRIM3-201ENST00000345851 GRHL1Q9NZI5 618 aa23.06■■□□□ 1.28
TRIM3-201ENST00000345851 ARMCX3Q9UH62 379 aaPredicted RBP23.06■■□□□ 1.28
TRIM3-201ENST00000345851 CTCFP49711 727 aaPredicted RBP23.05■■□□□ 1.28
TRIM3-201ENST00000345851 MARSP56192 900 aaKnown RBP23.05■■□□□ 1.28
TRIM3-201ENST00000345851 MAPK7Q13164 816 aa23.05■■□□□ 1.28
TRIM3-201ENST00000345851 TAOK1Q7L7X3 1001 aa23.05■■□□□ 1.28
TRIM3-201ENST00000345851 NKX1-2Q9UD57 310 aaPredicted RBP23.05■■□□□ 1.28
TRIM3-201ENST00000345851 TMEM120BA0PK00 339 aa23.05■■□□□ 1.28
TRIM3-201ENST00000345851 TNNI2P48788 182 aa23.05■■□□□ 1.28
TRIM3-201ENST00000345851 RBBP5Q15291 538 aaKnown RBP23.05■■□□□ 1.28
TRIM3-201ENST00000345851 SLF2Q8IX21 1173 aa23.05■■□□□ 1.28
TRIM3-201ENST00000345851 COA7Q96BR5 231 aa23.05■■□□□ 1.28
TRIM3-201ENST00000345851 FAM163AQ96GL9 167 aaPredicted RBP23.05■■□□□ 1.28
TRIM3-201ENST00000345851 LRRC37AA6NMS7 1700 aa23.05■■□□□ 1.28
TRIM3-201ENST00000345851 SNUPNO95149 360 aaKnown RBP23.04■■□□□ 1.28
TRIM3-201ENST00000345851 AFPP02771 609 aaKnown RBP23.04■■□□□ 1.28
TRIM3-201ENST00000345851 PDHA1P08559 390 aa23.04■■□□□ 1.28
TRIM3-201ENST00000345851 ATP4AP20648 1035 aa23.04■■□□□ 1.28
TRIM3-201ENST00000345851 RNASELQ05823 741 aaKnown RBP23.04■■□□□ 1.28
TRIM3-201ENST00000345851 SHROOM1Q2M3G4 852 aaPredicted RBP23.04■■□□□ 1.28
TRIM3-201ENST00000345851 SPATA21Q7Z572 469 aa23.04■■□□□ 1.28
TRIM3-201ENST00000345851 CCDC65Q8IXS2 484 aa23.04■■□□□ 1.28
TRIM3-201ENST00000345851 ETAA1Q9NY74 926 aa23.04■■□□□ 1.28
TRIM3-201ENST00000345851 ZMYND8Q9ULU4 1186 aaPredicted RBP23.04■■□□□ 1.28
TRIM3-201ENST00000345851 SNED1Q8TER0 1413 aa23.04■■□□□ 1.28
TRIM3-201ENST00000345851 KRT18P05783 430 aaKnown RBP23.04■■□□□ 1.28
TRIM3-201ENST00000345851 CASP5P51878 434 aa23.04■■□□□ 1.28
TRIM3-201ENST00000345851 ADCY1Q08828 1119 aa23.04■■□□□ 1.28
TRIM3-201ENST00000345851 CDC42EP5Q6NZY7 148 aa23.04■■□□□ 1.28
TRIM3-201ENST00000345851 GPBP1Q86WP2 473 aa23.04■■□□□ 1.28
TRIM3-201ENST00000345851 ALG3Q92685 438 aa23.04■■□□□ 1.28
TRIM3-201ENST00000345851 ETNK1Q9HBU6 452 aa23.04■■□□□ 1.28
TRIM3-201ENST00000345851 RASAL2Q9UJF2 1139 aa23.04■■□□□ 1.28
TRIM3-201ENST00000345851 DPPA5A6NC42 116 aa23.03■■□□□ 1.28
TRIM3-201ENST00000345851 A6NHS1 94 aa23.03■■□□□ 1.28
TRIM3-201ENST00000345851 RIPK2O43353 540 aa23.03■■□□□ 1.28
TRIM3-201ENST00000345851 EDIL3O43854 480 aa23.03■■□□□ 1.28
TRIM3-201ENST00000345851 LUC7L3O95232 432 aaKnown RBP23.03■■□□□ 1.28
TRIM3-201ENST00000345851 SEPT2Q15019 361 aa23.03■■□□□ 1.28
TRIM3-201ENST00000345851 LRRC47Q8N1G4 583 aaKnown RBP23.03■■□□□ 1.28
TRIM3-201ENST00000345851 GBP7Q8N8V2 638 aaPredicted RBP23.03■■□□□ 1.28
TRIM3-201ENST00000345851 LNX1Q8TBB1 728 aaPredicted RBP23.03■■□□□ 1.28
TRIM3-201ENST00000345851 SEPT11Q9NVA2 429 aaKnown RBP23.03■■□□□ 1.28
TRIM3-201ENST00000345851 STK32BQ9NY57 414 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms