RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 LAMB4A4D0S4 1761 aa14.38□□□□□ -0.11
CASC4-202ENST00000345795 PITPNM2Q9BZ72 1349 aa14.38□□□□□ -0.11
CASC4-202ENST00000345795 TLR2O60603 784 aa14.38□□□□□ -0.11
CASC4-202ENST00000345795 ICAM1P05362 532 aa14.38□□□□□ -0.11
CASC4-202ENST00000345795 POTEJP0CG39 1038 aa14.38□□□□□ -0.11
CASC4-202ENST00000345795 CNGA1P29973 690 aa14.38□□□□□ -0.11
CASC4-202ENST00000345795 PDCLQ13371 301 aa14.38□□□□□ -0.11
CASC4-202ENST00000345795 SNRNP35Q16560 246 aaKnown RBP14.38□□□□□ -0.11
CASC4-202ENST00000345795 LMBR1Q8WVP7 490 aa14.38□□□□□ -0.11
CASC4-202ENST00000345795 C1orf54Q8WWF1 131 aa14.38□□□□□ -0.11
CASC4-202ENST00000345795 CEP63Q96MT8 703 aa14.38□□□□□ -0.11
CASC4-202ENST00000345795 PDCD2LQ9BRP1 358 aa14.38□□□□□ -0.11
CASC4-202ENST00000345795 AJAP1Q9UKB5 411 aaPredicted RBP14.38□□□□□ -0.11
CASC4-202ENST00000345795 GLI3P10071 1580 aa14.38□□□□□ -0.11
CASC4-202ENST00000345795 OPLAHO14841 1288 aa14.38□□□□□ -0.11
CASC4-202ENST00000345795 BFSP1Q12934 665 aa14.38□□□□□ -0.11
CASC4-202ENST00000345795 CCDC33Q8N5R6 958 aa14.38□□□□□ -0.11
CASC4-202ENST00000345795 RNF149Q8NC42 400 aa14.38□□□□□ -0.11
CASC4-202ENST00000345795 SLC35G2Q8TBE7 412 aa14.38□□□□□ -0.11
CASC4-202ENST00000345795 COPS5Q92905 334 aa14.38□□□□□ -0.11
CASC4-202ENST00000345795 THOC1Q96FV9 657 aaKnown RBP14.38□□□□□ -0.11
CASC4-202ENST00000345795 TTI1O43156 1089 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 CYP2C8P10632 490 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 GNGT1P63211 74 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 IFRD2Q12894 506 aaPredicted RBP14.37□□□□□ -0.11
CASC4-202ENST00000345795 SEL1L2Q5TEA6 688 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 SCYL2Q6P3W7 929 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 TAS1R2Q8TE23 839 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 SLC35C1Q96A29 364 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 RNF25Q96BH1 459 aaPredicted RBP14.37□□□□□ -0.11
CASC4-202ENST00000345795 EXOC7Q9UPT5 735 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 PRRC2BQ5JSZ5 2229 aaKnown RBP14.37□□□□□ -0.11
CASC4-202ENST00000345795 IGKV6D-41A0A0C4DH26 115 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 PDXKO00764 312 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 EDIL3O43854 480 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 SGPL1O95470 568 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 VIL1P09327 827 aaKnown RBP14.37□□□□□ -0.11
CASC4-202ENST00000345795 USP14P54578 494 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 PSMC5P62195 406 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 CDO1Q16878 200 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 ZNF720Q7Z2F6 126 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 C7orf31Q8N865 590 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 ANAPC7Q9UJX3 599 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 NAGPAQ9UK23 515 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 RASSF10A6NK89 507 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 ANKRD63C9JTQ0 380 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 WEE2P0C1S8 567 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 H2AFXP16104 143 aaPredicted RBP14.37□□□□□ -0.11
CASC4-202ENST00000345795 RARRES1P49788 294 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 BACE1P56817 501 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 CCDC38Q502W7 563 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 FAM47CQ5HY64 1035 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 SLC47A2Q86VL8 602 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 FBXO16Q8IX29 292 aaPredicted RBP14.37□□□□□ -0.11
CASC4-202ENST00000345795 ANKRD42Q8N9B4 389 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 SLC9A2Q9UBY0 812 aa14.37□□□□□ -0.11
CASC4-202ENST00000345795 WDR46O15213 610 aaKnown RBP14.36□□□□□ -0.11
CASC4-202ENST00000345795 MCM3P25205 808 aa14.36□□□□□ -0.11
CASC4-202ENST00000345795 CCT5P48643 541 aa14.36□□□□□ -0.11
CASC4-202ENST00000345795 FSTL1Q12841 308 aa14.36□□□□□ -0.11
CASC4-202ENST00000345795 MAP1SQ66K74 1059 aaPredicted RBP14.36□□□□□ -0.11
CASC4-202ENST00000345795 CYP4F22Q6NT55 531 aa14.36□□□□□ -0.11
CASC4-202ENST00000345795 DPP9Q86TI2 863 aa14.36□□□□□ -0.11
CASC4-202ENST00000345795 ARHGEF19Q8IW93 802 aa14.36□□□□□ -0.11
CASC4-202ENST00000345795 GMCL1P1Q8NEA9 526 aa14.36□□□□□ -0.11
CASC4-202ENST00000345795 TATDN2Q93075 761 aa14.36□□□□□ -0.11
CASC4-202ENST00000345795 TEX13BQ9BXU2 312 aa14.36□□□□□ -0.11
CASC4-202ENST00000345795 STIM2Q9P246 746 aa14.36□□□□□ -0.11
CASC4-202ENST00000345795 UTP11Q9Y3A2 253 aaKnown RBP14.36□□□□□ -0.11
CASC4-202ENST00000345795 IRS2Q9Y4H2 1338 aa14.36□□□□□ -0.11
CASC4-202ENST00000345795 ONECUT3O60422 494 aaPredicted RBP14.36□□□□□ -0.11
CASC4-202ENST00000345795 SMARCA1P28370 1054 aa14.36□□□□□ -0.11
CASC4-202ENST00000345795 HNRNPH2P55795 449 aaKnown RBP14.36□□□□□ -0.11
CASC4-202ENST00000345795 SUPT20HL1Q3ZLR7 823 aa14.36□□□□□ -0.11
CASC4-202ENST00000345795 BSPRYQ5W0U4 402 aa14.36□□□□□ -0.11
CASC4-202ENST00000345795 FUT8Q9BYC5 575 aa14.36□□□□□ -0.11
CASC4-202ENST00000345795 GOLGA8MH3BSY2 632 aa14.36□□□□□ -0.11
CASC4-202ENST00000345795 VWA5AO00534 786 aa14.36□□□□□ -0.11
CASC4-202ENST00000345795 NDUFAB1O14561 156 aa14.36□□□□□ -0.11
CASC4-202ENST00000345795 TMEM191BP0C7N4 346 aa14.36□□□□□ -0.11
CASC4-202ENST00000345795 FERP16591 822 aa14.36□□□□□ -0.11
CASC4-202ENST00000345795 MRPS9P82933 396 aaKnown RBP14.36□□□□□ -0.11
CASC4-202ENST00000345795 PPP3CAQ08209 521 aa14.36□□□□□ -0.11
CASC4-202ENST00000345795 CPNE8Q86YQ8 564 aa14.36□□□□□ -0.11
CASC4-202ENST00000345795 ACAD9Q9H845 621 aa14.36□□□□□ -0.11
CASC4-202ENST00000345795 CWC15Q9P013 229 aaKnown RBP14.36□□□□□ -0.11
CASC4-202ENST00000345795 PPP1R9AQ9ULJ8 1098 aa14.36□□□□□ -0.11
CASC4-202ENST00000345795 NOC2LQ9Y3T9 749 aaKnown RBP14.36□□□□□ -0.11
CASC4-202ENST00000345795 MYH3P11055 1940 aa14.36□□□□□ -0.11
CASC4-202ENST00000345795 ASTN1O14525 1302 aa14.36□□□□□ -0.11
CASC4-202ENST00000345795 ZNF541Q9H0D2 1346 aa14.36□□□□□ -0.11
CASC4-202ENST00000345795 ACSL3O95573 720 aa14.35□□□□□ -0.11
CASC4-202ENST00000345795 PSAPP07602 524 aa14.35□□□□□ -0.11
CASC4-202ENST00000345795 FGFR4P22455 802 aa14.35□□□□□ -0.11
CASC4-202ENST00000345795 NPTX2P47972 431 aa14.35□□□□□ -0.11
CASC4-202ENST00000345795 ACTR2P61160 394 aa14.35□□□□□ -0.11
CASC4-202ENST00000345795 HDLBPQ00341 1268 aaKnown RBP14.35□□□□□ -0.11
CASC4-202ENST00000345795 SETQ01105 290 aaPredicted RBP14.35□□□□□ -0.11
CASC4-202ENST00000345795 PGM5Q15124 567 aa14.35□□□□□ -0.11
CASC4-202ENST00000345795 STXBP2Q15833 593 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 164.4 ms