RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 TMEM120BA0PK00 339 aa18.59■□□□□ 0.57
SPAST-202ENST00000345662 FAM47DPA6NHR8 397 aa18.59■□□□□ 0.57
SPAST-202ENST00000345662 DAB2IPQ5VWQ8 1189 aa18.59■□□□□ 0.57
SPAST-202ENST00000345662 ZNF746Q6NUN9 644 aaPredicted RBP18.59■□□□□ 0.57
SPAST-202ENST00000345662 XXYLT1Q8NBI6 393 aa18.59■□□□□ 0.57
SPAST-202ENST00000345662 TEKT4Q8WW24 435 aa18.59■□□□□ 0.57
SPAST-202ENST00000345662 ZNF233A6NK53 670 aa18.58■□□□□ 0.57
SPAST-202ENST00000345662 SORBS3O60504 671 aa18.58■□□□□ 0.57
SPAST-202ENST00000345662 RHOBTB3O94955 611 aa18.58■□□□□ 0.57
SPAST-202ENST00000345662 SCTRP47872 440 aa18.58■□□□□ 0.57
SPAST-202ENST00000345662 KDSRQ06136 332 aa18.58■□□□□ 0.57
SPAST-202ENST00000345662 AP1B1Q10567 949 aa18.58■□□□□ 0.57
SPAST-202ENST00000345662 CNGA3Q16281 694 aa18.58■□□□□ 0.57
SPAST-202ENST00000345662 FRMD5Q7Z6J6 570 aa18.58■□□□□ 0.57
SPAST-202ENST00000345662 HSPH1Q92598 858 aa18.58■□□□□ 0.57
SPAST-202ENST00000345662 ATP6V1E2Q96A05 226 aa18.58■□□□□ 0.57
SPAST-202ENST00000345662 CCSER1Q9C0I3 900 aa18.58■□□□□ 0.57
SPAST-202ENST00000345662 RANBP17Q9H2T7 1088 aaKnown RBP18.58■□□□□ 0.57
SPAST-202ENST00000345662 LEMD3Q9Y2U8 911 aa18.58■□□□□ 0.57
SPAST-202ENST00000345662 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.58■□□□□ 0.57
SPAST-202ENST00000345662 S100BP04271 92 aaPredicted RBP18.58■□□□□ 0.57
SPAST-202ENST00000345662 TFAMQ00059 246 aaKnown RBP18.58■□□□□ 0.57
SPAST-202ENST00000345662 RHOT1Q8IXI2 618 aa18.58■□□□□ 0.57
SPAST-202ENST00000345662 ATL2Q8NHH9 583 aa18.58■□□□□ 0.57
SPAST-202ENST00000345662 NXF1Q9UBU9 619 aaKnown RBP18.58■□□□□ 0.57
SPAST-202ENST00000345662 ZFXP17010 805 aaPredicted RBP18.58■□□□□ 0.56
SPAST-202ENST00000345662 HSD17B3P37058 310 aa18.58■□□□□ 0.56
SPAST-202ENST00000345662 ZC3H15Q8WU90 426 aaKnown RBP18.58■□□□□ 0.56
SPAST-202ENST00000345662 NPHS2Q9NP85 383 aa18.58■□□□□ 0.56
SPAST-202ENST00000345662 METP08581 1390 aa18.58■□□□□ 0.56
SPAST-202ENST00000345662 ITIH2P19823 946 aa18.58■□□□□ 0.56
SPAST-202ENST00000345662 AP3B2Q13367 1082 aa18.58■□□□□ 0.56
SPAST-202ENST00000345662 CACYBPQ9HB71 228 aaKnown RBP18.58■□□□□ 0.56
SPAST-202ENST00000345662 ANP32DO95626 131 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 ENO1P06733 434 aaKnown RBP18.57■□□□□ 0.56
SPAST-202ENST00000345662 SERPINB3P29508 390 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 VHLP40337 213 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 CYLC2Q14093 348 aaPredicted RBP18.57■□□□□ 0.56
SPAST-202ENST00000345662 MORF4L2Q15014 288 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 KLC3Q6P597 504 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 THAP11Q96EK4 314 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 KIF9Q9HAQ2 790 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 HEG1Q9ULI3 1381 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 SUGP1Q8IWZ8 645 aaKnown RBP18.57■□□□□ 0.56
SPAST-202ENST00000345662 RNF169Q8NCN4 708 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 FBXL13Q8NEE6 735 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 ZBTB10Q96DT7 871 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 C11orf70Q9BRQ4 267 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 ADA2Q9NZK5 511 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 CDK8P49336 464 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 SLC20A2Q08357 652 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 SLC12A1Q13621 1099 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 DDX42Q86XP3 938 aaKnown RBP eCLIP18.57■□□□□ 0.56
SPAST-202ENST00000345662 PIGOQ8TEQ8 1089 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 ARL8AQ96BM9 186 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 VPS11Q9H270 941 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 UBN1Q9NPG3 1134 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 PDP2Q9P2J9 529 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 NAB2Q15742 525 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 KIF19Q2TAC6 998 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 SPICE1Q8N0Z3 855 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 TMEM35BQ8NCS4 154 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 PRPF31Q8WWY3 499 aaKnown RBP18.57■□□□□ 0.56
SPAST-202ENST00000345662 TSSK1BQ9BXA7 367 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 BARHL2Q9NY43 387 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 KIF1BO60333 1816 aa18.57■□□□□ 0.56
SPAST-202ENST00000345662 PDS5AQ29RF7 1337 aaKnown RBP18.56■□□□□ 0.56
SPAST-202ENST00000345662 SYCE1LA8MT33 242 aa18.56■□□□□ 0.56
SPAST-202ENST00000345662 ACADSP16219 412 aa18.56■□□□□ 0.56
SPAST-202ENST00000345662 ITIH4Q14624 930 aa18.56■□□□□ 0.56
SPAST-202ENST00000345662 SLC13A1Q9BZW2 595 aa18.56■□□□□ 0.56
SPAST-202ENST00000345662 ZBTB1Q9Y2K1 713 aa18.56■□□□□ 0.56
SPAST-202ENST00000345662 LRRC7Q96NW7 1537 aa18.56■□□□□ 0.56
SPAST-202ENST00000345662 POTEB3A0JP26 581 aa18.56■□□□□ 0.56
SPAST-202ENST00000345662 POTECB2RU33 542 aa18.56■□□□□ 0.56
SPAST-202ENST00000345662 NQO1P15559 274 aaKnown RBP18.56■□□□□ 0.56
SPAST-202ENST00000345662 HDAC4P56524 1084 aa18.56■□□□□ 0.56
SPAST-202ENST00000345662 POTEBQ6S5H4 581 aa18.56■□□□□ 0.56
SPAST-202ENST00000345662 PACS2Q86VP3 889 aa18.56■□□□□ 0.56
SPAST-202ENST00000345662 JAMLQ86YT9 394 aa18.56■□□□□ 0.56
SPAST-202ENST00000345662 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.56■□□□□ 0.56
SPAST-202ENST00000345662 IL25Q9H293 177 aa18.56■□□□□ 0.56
SPAST-202ENST00000345662 ANGPTL3Q9Y5C1 460 aa18.56■□□□□ 0.56
SPAST-202ENST00000345662 XDHP47989 1333 aa18.56■□□□□ 0.56
SPAST-202ENST00000345662 BMP3P12645 472 aa18.56■□□□□ 0.56
SPAST-202ENST00000345662 FDPSP14324 419 aaKnown RBP18.56■□□□□ 0.56
SPAST-202ENST00000345662 TAC1P20366 129 aa18.56■□□□□ 0.56
SPAST-202ENST00000345662 CYTH1Q15438 398 aa18.56■□□□□ 0.56
SPAST-202ENST00000345662 TLR3O15455 904 aaKnown RBP18.56■□□□□ 0.56
SPAST-202ENST00000345662 KDM1AO60341 852 aa18.56■□□□□ 0.56
SPAST-202ENST00000345662 CALB1P05937 261 aa18.56■□□□□ 0.56
SPAST-202ENST00000345662 MYBL1P10243 752 aa18.56■□□□□ 0.56
SPAST-202ENST00000345662 ERFP50548 548 aa18.56■□□□□ 0.56
SPAST-202ENST00000345662 TFDP1Q14186 410 aa18.56■□□□□ 0.56
SPAST-202ENST00000345662 LBHD1Q9BQE6 289 aaPredicted RBP18.56■□□□□ 0.56
SPAST-202ENST00000345662 ANKZF1Q9H8Y5 726 aa18.56■□□□□ 0.56
SPAST-202ENST00000345662 ALG13Q9NP73 1137 aaKnown RBP18.56■□□□□ 0.56
SPAST-202ENST00000345662 ZNF609O15014 1411 aa18.56■□□□□ 0.56
SPAST-202ENST00000345662 PNPLA6Q8IY17 1366 aa18.55■□□□□ 0.56
SPAST-202ENST00000345662 PI4K2BG5E9Z4 385 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms