RNA–Protein interactions for RNA: ENST00000344129.2

CT55-202, Transcript of cancer/testis antigen 55, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CT55, Length 1,728 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-202ENST00000344129 RETREG2Q8NC44 543 aa13.93□□□□□ -0.18
CT55-202ENST00000344129 PXYLP1Q8TE99 480 aa13.93□□□□□ -0.18
CT55-202ENST00000344129 LMBR1Q8WVP7 490 aa13.93□□□□□ -0.18
CT55-202ENST00000344129 NLRP4Q96MN2 994 aa13.93□□□□□ -0.18
CT55-202ENST00000344129 UPF3AQ9H1J1 476 aaKnown RBP13.93□□□□□ -0.18
CT55-202ENST00000344129 SPC25Q9HBM1 224 aa13.93□□□□□ -0.18
CT55-202ENST00000344129 PTCH2Q9Y6C5 1203 aa13.93□□□□□ -0.18
CT55-202ENST00000344129 MAGEB2O15479 319 aa13.92□□□□□ -0.18
CT55-202ENST00000344129 AKAP3O75969 853 aa13.92□□□□□ -0.18
CT55-202ENST00000344129 TPM3P06753 285 aa13.92□□□□□ -0.18
CT55-202ENST00000344129 RPL13P26373 211 aaKnown RBP13.92□□□□□ -0.18
CT55-202ENST00000344129 DNM2P50570 870 aa13.92□□□□□ -0.18
CT55-202ENST00000344129 HIC1Q14526 733 aa13.92□□□□□ -0.18
CT55-202ENST00000344129 MAP3K21Q5TCX8 1036 aa13.92□□□□□ -0.18
CT55-202ENST00000344129 VSTM4Q8IW00 320 aa13.92□□□□□ -0.18
CT55-202ENST00000344129 LINC01465Q8N7H1 131 aa13.92□□□□□ -0.18
CT55-202ENST00000344129 RNF149Q8NC42 400 aa13.92□□□□□ -0.18
CT55-202ENST00000344129 HVCN1Q96D96 273 aa13.92□□□□□ -0.18
CT55-202ENST00000344129 BICD1Q96G01 975 aa13.92□□□□□ -0.18
CT55-202ENST00000344129 CBWD1Q9BRT8 395 aa13.92□□□□□ -0.18
CT55-202ENST00000344129 NOC4LQ9BVI4 516 aaKnown RBP13.92□□□□□ -0.18
CT55-202ENST00000344129 EXOC7Q9UPT5 735 aa13.92□□□□□ -0.18
CT55-202ENST00000344129 AKT3Q9Y243 479 aa13.92□□□□□ -0.18
CT55-202ENST00000344129 HTTP42858 3142 aa13.92□□□□□ -0.18
CT55-202ENST00000344129 EVPLQ92817 2033 aa13.91□□□□□ -0.18
CT55-202ENST00000344129 H0YCG3 227 aa13.91□□□□□ -0.18
CT55-202ENST00000344129 HAS3O00219 553 aa13.91□□□□□ -0.18
CT55-202ENST00000344129 ADAMTS4O75173 837 aa13.91□□□□□ -0.18
CT55-202ENST00000344129 VTNP04004 478 aa13.91□□□□□ -0.18
CT55-202ENST00000344129 ZNF200P98182 395 aaPredicted RBP13.91□□□□□ -0.18
CT55-202ENST00000344129 UBXN1Q04323 297 aa13.91□□□□□ -0.18
CT55-202ENST00000344129 MXD4Q14582 209 aaPredicted RBP13.91□□□□□ -0.18
CT55-202ENST00000344129 MIIPQ5JXC2 388 aa13.91□□□□□ -0.18
CT55-202ENST00000344129 SLC39A4Q6P5W5 647 aa13.91□□□□□ -0.18
CT55-202ENST00000344129 CXCL17Q6UXB2 119 aa13.91□□□□□ -0.18
CT55-202ENST00000344129 SLAIN1Q8ND83 568 aa13.91□□□□□ -0.18
CT55-202ENST00000344129 ZSWIM2Q8NEG5 633 aa13.91□□□□□ -0.18
CT55-202ENST00000344129 GOLGA5Q8TBA6 731 aa13.91□□□□□ -0.18
CT55-202ENST00000344129 KCNG1Q9UIX4 513 aa13.91□□□□□ -0.18
CT55-202ENST00000344129 RRN3P2A6NIE6 340 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 LGALS16A8MUM7 142 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 K7ERI5 159 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 GNA14O95837 355 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 EDN1P05305 212 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 TPM2P07951 284 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 GRK4P32298 578 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 STRN3Q13033 797 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 NFIL3Q16649 462 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 ARMCX5Q6P1M9 558 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 NFRKBQ6P4R8 1299 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 CCDC186Q7Z3E2 898 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 RDH13Q8NBN7 331 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 SH3TC2Q8TF17 1288 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 MTG1Q9BT17 334 aaPredicted RBP13.9□□□□□ -0.18
CT55-202ENST00000344129 FAM49AQ9H0Q0 323 aaPredicted RBP13.9□□□□□ -0.18
CT55-202ENST00000344129 DMAC2Q9NW81 257 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 WBP1LQ9NX94 342 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 HDAC6Q9UBN7 1215 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 DDX20Q9UHI6 824 aaKnown RBP13.9□□□□□ -0.18
CT55-202ENST00000344129 NRCAMQ92823 1304 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 HNRNPDLO14979 420 aaKnown RBP13.9□□□□□ -0.18
CT55-202ENST00000344129 EXOC3O60645 756 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 EPB41P11171 864 aaKnown RBP13.9□□□□□ -0.18
CT55-202ENST00000344129 TMOD1P28289 359 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 ADSSP30520 456 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 PRMT2P55345 433 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 TFDP1Q14186 410 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 ARID5BQ14865 1188 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 KCNA10Q16322 511 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 MAN2A1Q16706 1144 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 VWA3BQ502W6 1294 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 RUFY4Q6ZNE9 571 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 ZBTB8OSQ8IWT0 167 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 FAM186BQ8IYM0 893 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 TRIM44Q96DX7 344 aaPredicted RBP13.9□□□□□ -0.18
CT55-202ENST00000344129 ZNF830Q96NB3 372 aaPredicted RBP13.9□□□□□ -0.18
CT55-202ENST00000344129 KATNAL1Q9BW62 490 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 HSPBP1Q9NZL4 362 aa13.9□□□□□ -0.18
CT55-202ENST00000344129 KAT6AQ92794 2004 aa13.89□□□□□ -0.19
CT55-202ENST00000344129 SIP14410 1827 aa13.89□□□□□ -0.19
CT55-202ENST00000344129 PHLPP2Q6ZVD8 1323 aa13.89□□□□□ -0.19
CT55-202ENST00000344129 GOLGA8IPA6NC78 632 aa13.89□□□□□ -0.19
CT55-202ENST00000344129 GOLGA8JA6NMD2 632 aa13.89□□□□□ -0.19
CT55-202ENST00000344129 GOLGA6L6A8MZA4 724 aa13.89□□□□□ -0.19
CT55-202ENST00000344129 TULP1O00294 542 aaPredicted RBP13.89□□□□□ -0.19
CT55-202ENST00000344129 SLC16A3O15427 465 aaKnown RBP13.89□□□□□ -0.19
CT55-202ENST00000344129 ZEB2O60315 1214 aa13.89□□□□□ -0.19
CT55-202ENST00000344129 KPNA6O60684 536 aa13.89□□□□□ -0.19
CT55-202ENST00000344129 CYP2C9P11712 490 aa13.89□□□□□ -0.19
CT55-202ENST00000344129 PBX1P40424 430 aa13.89□□□□□ -0.19
CT55-202ENST00000344129 LIG4P49917 911 aa13.89□□□□□ -0.19
CT55-202ENST00000344129 GOLGA8FQ08AF8 430 aa13.89□□□□□ -0.19
CT55-202ENST00000344129 GOLGA8DPQ0D2H9 430 aa13.89□□□□□ -0.19
CT55-202ENST00000344129 TMEM62Q0P6H9 643 aa13.89□□□□□ -0.19
CT55-202ENST00000344129 CDCA2Q69YH5 1023 aaPredicted RBP13.89□□□□□ -0.19
CT55-202ENST00000344129 FRMD5Q7Z6J6 570 aa13.89□□□□□ -0.19
CT55-202ENST00000344129 TRIM59Q8IWR1 403 aa13.89□□□□□ -0.19
CT55-202ENST00000344129 KIAA0319LQ8IZA0 1049 aa13.89□□□□□ -0.19
CT55-202ENST00000344129 C7orf31Q8N865 590 aa13.89□□□□□ -0.19
CT55-202ENST00000344129 KLHDC9Q8NEP7 349 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms