RNA–Protein interactions for RNA: ENST00000343805.10

SP140-201, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-201ENST00000343805 RABEP2Q9H5N1 569 aa9.45□□□□□ -0.9
SP140-201ENST00000343805 RMND1Q9NWS8 449 aa9.45□□□□□ -0.9
SP140-201ENST00000343805 TMEM260Q9NX78 707 aa9.45□□□□□ -0.9
SP140-201ENST00000343805 C6orf203Q9P0P8 240 aaPredicted RBP9.45□□□□□ -0.9
SP140-201ENST00000343805 LIMA1Q9UHB6 759 aaKnown RBP9.45□□□□□ -0.9
SP140-201ENST00000343805 MAD2L2Q9UI95 211 aa9.45□□□□□ -0.9
SP140-201ENST00000343805 PHLPP1O60346 1717 aa9.45□□□□□ -0.9
SP140-201ENST00000343805 SMCO2A6NFE2 343 aa9.45□□□□□ -0.9
SP140-201ENST00000343805 PSMA7O14818 248 aa9.45□□□□□ -0.9
SP140-201ENST00000343805 LSM1O15116 133 aaKnown RBP9.45□□□□□ -0.9
SP140-201ENST00000343805 FZD6O60353 706 aa9.45□□□□□ -0.9
SP140-201ENST00000343805 SLURP2P0DP57 97 aa9.45□□□□□ -0.9
SP140-201ENST00000343805 RIPK1Q13546 671 aa9.45□□□□□ -0.9
SP140-201ENST00000343805 ACCSLQ4AC99 568 aa9.45□□□□□ -0.9
SP140-201ENST00000343805 KRT26Q7Z3Y9 468 aa9.45□□□□□ -0.9
SP140-201ENST00000343805 CABP7Q86V35 215 aa9.45□□□□□ -0.9
SP140-201ENST00000343805 C4orf32Q8N8J7 132 aa9.45□□□□□ -0.9
SP140-201ENST00000343805 ZNF280CQ8ND82 737 aa9.45□□□□□ -0.9
SP140-201ENST00000343805 TEKT4Q8WW24 435 aa9.45□□□□□ -0.9
SP140-201ENST00000343805 TBC1D31Q96DN5 1066 aa9.45□□□□□ -0.9
SP140-201ENST00000343805 TCHPQ9BT92 498 aa9.45□□□□□ -0.9
SP140-201ENST00000343805 NAA15Q9BXJ9 866 aaKnown RBP9.45□□□□□ -0.9
SP140-201ENST00000343805 MOV10L1Q9BXT6 1211 aaKnown RBP9.45□□□□□ -0.9
SP140-201ENST00000343805 TAOK3Q9H2K8 898 aa9.45□□□□□ -0.9
SP140-201ENST00000343805 TCP11L1Q9NUJ3 509 aa9.45□□□□□ -0.9
SP140-201ENST00000343805 G3V3G9 751 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 STXBP3O00186 592 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 ZNF185O15231 689 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 SYF2O95926 243 aaKnown RBP9.44□□□□□ -0.9
SP140-201ENST00000343805 LONP1P36776 959 aaKnown RBP9.44□□□□□ -0.9
SP140-201ENST00000343805 MATR3P43243 847 aaKnown RBP eCLIP9.44□□□□□ -0.9
SP140-201ENST00000343805 CDKN1CP49918 316 aaPredicted RBP9.44□□□□□ -0.9
SP140-201ENST00000343805 SPAG1Q07617 926 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 STIM1Q13586 685 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 CASP8Q14790 479 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 INAQ16352 499 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 ADSSL1Q8N142 457 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 CCDC155Q8N6L0 562 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 MB21D1Q8N884 522 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 SMARCC1Q92922 1105 aaPredicted RBP9.44□□□□□ -0.9
SP140-201ENST00000343805 MPP4Q96JB8 637 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 TUBGCP2Q9BSJ2 902 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 DMAP1Q9NPF5 467 aaPredicted RBP9.44□□□□□ -0.9
SP140-201ENST00000343805 SH3GLB1Q9Y371 365 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 REXO2Q9Y3B8 237 aaKnown RBP9.44□□□□□ -0.9
SP140-201ENST00000343805 DAAM1Q9Y4D1 1078 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 NHSL1Q5SYE7 1610 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 GRIN2DO15399 1336 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 FAM170AA1A519 330 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 H7C1D1 291 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 ATP1A1P05023 1023 aaKnown RBP9.44□□□□□ -0.9
SP140-201ENST00000343805 SSBP05455 408 aaKnown RBP eCLIP9.44□□□□□ -0.9
SP140-201ENST00000343805 PLEKP08567 350 aaPredicted RBP9.44□□□□□ -0.9
SP140-201ENST00000343805 ATICP31939 592 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 IRS1P35568 1242 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 EIF1AXP47813 144 aaKnown RBP9.44□□□□□ -0.9
SP140-201ENST00000343805 TRAPPC10P48553 1259 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 FXR2P51116 673 aaKnown RBP eCLIP9.44□□□□□ -0.9
SP140-201ENST00000343805 PAK2Q13177 524 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 XRCC4Q13426 336 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 MAP7D1Q3KQU3 841 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 GSPT2Q8IYD1 628 aaKnown RBP9.44□□□□□ -0.9
SP140-201ENST00000343805 TTC39CQ8N584 583 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 ANKRD13CQ8N6S4 541 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 CAGE1Q8TC20 777 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 COA7Q96BR5 231 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 PIGSQ96S52 555 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 FAM207AQ9NSI2 230 aaPredicted RBP9.44□□□□□ -0.9
SP140-201ENST00000343805 SLC5A4Q9NY91 659 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 ZNF148Q9UQR1 794 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 PRELID1Q9Y255 219 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 SSX2IPQ9Y2D8 614 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 EFR3BQ9Y2G0 817 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 DOT1LQ8TEK3 1739 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 DUOX1Q9NRD9 1551 aa9.44□□□□□ -0.9
SP140-201ENST00000343805 ATF4P18848 351 aaPredicted RBP9.43□□□□□ -0.9
SP140-201ENST00000343805 WHAMMP3Q1A5X7 153 aa9.43□□□□□ -0.9
SP140-201ENST00000343805 EML3Q32P44 896 aa9.43□□□□□ -0.9
SP140-201ENST00000343805 ANKRD40Q6AI12 368 aa9.43□□□□□ -0.9
SP140-201ENST00000343805 BPHLQ86WA6 291 aaPredicted RBP9.43□□□□□ -0.9
SP140-201ENST00000343805 LRRC47Q8N1G4 583 aaKnown RBP9.43□□□□□ -0.9
SP140-201ENST00000343805 TRPC4APQ8TEL6 797 aa9.43□□□□□ -0.9
SP140-201ENST00000343805 NGLY1Q96IV0 654 aa9.43□□□□□ -0.9
SP140-201ENST00000343805 CDK5RAP3Q96JB5 506 aa9.43□□□□□ -0.9
SP140-201ENST00000343805 EYA3Q99504 573 aa9.43□□□□□ -0.9
SP140-201ENST00000343805 NOC4LQ9BVI4 516 aaKnown RBP9.43□□□□□ -0.9
SP140-201ENST00000343805 ANKRD2Q9GZV1 360 aa9.43□□□□□ -0.9
SP140-201ENST00000343805 LACRTQ9GZZ8 138 aa9.43□□□□□ -0.9
SP140-201ENST00000343805 ZCWPW1Q9H0M4 648 aa9.43□□□□□ -0.9
SP140-201ENST00000343805 C2CD2Q9Y426 696 aa9.43□□□□□ -0.9
SP140-201ENST00000343805 BCL9LQ86UU0 1499 aa9.43□□□□□ -0.9
SP140-201ENST00000343805 CACNA1SQ13698 1873 aa9.43□□□□□ -0.9
SP140-201ENST00000343805 LRRIQ3A6PVS8 624 aaPredicted RBP9.43□□□□□ -0.9
SP140-201ENST00000343805 WDR46O15213 610 aaKnown RBP9.43□□□□□ -0.9
SP140-201ENST00000343805 FGFR1OPO95684 399 aaKnown RBP9.43□□□□□ -0.9
SP140-201ENST00000343805 LMNB1P20700 586 aa9.43□□□□□ -0.9
SP140-201ENST00000343805 BTDP43251 543 aa9.43□□□□□ -0.9
SP140-201ENST00000343805 RAB15P59190 212 aa9.43□□□□□ -0.9
SP140-201ENST00000343805 SULT2A1Q06520 285 aa9.43□□□□□ -0.9
SP140-201ENST00000343805 BCL2A1Q16548 175 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms