RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 BRD3Q15059 726 aa20.27■□□□□ 0.84
HOXA9-201ENST00000343483 MTERF2Q49AM1 385 aa20.27■□□□□ 0.84
HOXA9-201ENST00000343483 XKR3Q5GH77 459 aa20.27■□□□□ 0.84
HOXA9-201ENST00000343483 GJB7Q6PEY0 223 aa20.27■□□□□ 0.84
HOXA9-201ENST00000343483 MCPH1Q8NEM0 835 aa20.27■□□□□ 0.84
HOXA9-201ENST00000343483 ATP6V0A4Q9HBG4 840 aa20.27■□□□□ 0.84
HOXA9-201ENST00000343483 ZNF302Q9NR11 478 aa20.27■□□□□ 0.84
HOXA9-201ENST00000343483 RBPJLQ9UBG7 517 aa20.27■□□□□ 0.84
HOXA9-201ENST00000343483 CCDC151A5D8V7 595 aa20.26■□□□□ 0.83
HOXA9-201ENST00000343483 MYL7Q01449 175 aa20.26■□□□□ 0.83
HOXA9-201ENST00000343483 DMTNQ08495 405 aa20.26■□□□□ 0.83
HOXA9-201ENST00000343483 WDR78Q5VTH9 848 aa20.26■□□□□ 0.83
HOXA9-201ENST00000343483 PAPD7Q5XG87 772 aaKnown RBP20.26■□□□□ 0.83
HOXA9-201ENST00000343483 C12orf56Q8IXR9 622 aa20.26■□□□□ 0.83
HOXA9-201ENST00000343483 XXYLT1Q8NBI6 393 aa20.26■□□□□ 0.83
HOXA9-201ENST00000343483 MSANTD4Q8NCY6 345 aa20.26■□□□□ 0.83
HOXA9-201ENST00000343483 AJAP1Q9UKB5 411 aaPredicted RBP20.26■□□□□ 0.83
HOXA9-201ENST00000343483 EXOC7Q9UPT5 735 aa20.26■□□□□ 0.83
HOXA9-201ENST00000343483 SAR1BQ9Y6B6 198 aa20.26■□□□□ 0.83
HOXA9-201ENST00000343483 SYNGAP1Q96PV0 1343 aa20.26■□□□□ 0.83
HOXA9-201ENST00000343483 DOCK5Q9H7D0 1870 aa20.26■□□□□ 0.83
HOXA9-201ENST00000343483 TBC1D8O95759 1140 aa20.26■□□□□ 0.83
HOXA9-201ENST00000343483 PLA2G4AP47712 749 aa20.26■□□□□ 0.83
HOXA9-201ENST00000343483 APLP1P51693 650 aa20.26■□□□□ 0.83
HOXA9-201ENST00000343483 Q3C1V9 767 aa20.26■□□□□ 0.83
HOXA9-201ENST00000343483 INTS8Q75QN2 995 aaKnown RBP20.26■□□□□ 0.83
HOXA9-201ENST00000343483 C17orf75Q9HAS0 396 aa20.26■□□□□ 0.83
HOXA9-201ENST00000343483 XPNPEP1Q9NQW7 623 aa20.26■□□□□ 0.83
HOXA9-201ENST00000343483 FBXL5Q9UKA1 691 aa20.26■□□□□ 0.83
HOXA9-201ENST00000343483 RBAK-RBAKDNI3L0D1 243 aa20.25■□□□□ 0.83
HOXA9-201ENST00000343483 TULP1O00294 542 aaPredicted RBP20.25■□□□□ 0.83
HOXA9-201ENST00000343483 CELF2O95319 508 aaKnown RBP20.25■□□□□ 0.83
HOXA9-201ENST00000343483 RHOXF2BP0C7M4 288 aa20.25■□□□□ 0.83
HOXA9-201ENST00000343483 GJA5P36382 358 aa20.25■□□□□ 0.83
HOXA9-201ENST00000343483 DLG4P78352 724 aa20.25■□□□□ 0.83
HOXA9-201ENST00000343483 IQCEQ6IPM2 695 aa20.25■□□□□ 0.83
HOXA9-201ENST00000343483 ZSWIM2Q8NEG5 633 aa20.25■□□□□ 0.83
HOXA9-201ENST00000343483 RHOXF2Q9BQY4 288 aa20.25■□□□□ 0.83
HOXA9-201ENST00000343483 MLXIPQ9HAP2 919 aa20.25■□□□□ 0.83
HOXA9-201ENST00000343483 ADAMTS1Q9UHI8 967 aa20.25■□□□□ 0.83
HOXA9-201ENST00000343483 ATG7O95352 703 aa20.25■□□□□ 0.83
HOXA9-201ENST00000343483 VAMP7P51809 220 aa20.25■□□□□ 0.83
HOXA9-201ENST00000343483 POLGP54098 1239 aaPredicted RBP20.25■□□□□ 0.83
HOXA9-201ENST00000343483 SLC18A3Q16572 532 aa20.25■□□□□ 0.83
HOXA9-201ENST00000343483 GPAT2Q6NUI2 795 aa20.25■□□□□ 0.83
HOXA9-201ENST00000343483 IRF2BP2Q7Z5L9 587 aa20.25■□□□□ 0.83
HOXA9-201ENST00000343483 MAP4K3Q8IVH8 894 aa20.25■□□□□ 0.83
HOXA9-201ENST00000343483 TXLNBQ8N3L3 684 aa20.25■□□□□ 0.83
HOXA9-201ENST00000343483 ANKRD13CQ8N6S4 541 aa20.25■□□□□ 0.83
HOXA9-201ENST00000343483 TMEM174Q8WUU8 243 aa20.25■□□□□ 0.83
HOXA9-201ENST00000343483 SPIRE2Q8WWL2 714 aa20.25■□□□□ 0.83
HOXA9-201ENST00000343483 PNKPQ96T60 521 aa20.25■□□□□ 0.83
HOXA9-201ENST00000343483 POLR3FQ9H1D9 316 aaPredicted RBP20.25■□□□□ 0.83
HOXA9-201ENST00000343483 PDLIM7Q9NR12 457 aa20.25■□□□□ 0.83
HOXA9-201ENST00000343483 ST7Q9NRC1 585 aa20.25■□□□□ 0.83
HOXA9-201ENST00000343483 MAFBQ9Y5Q3 323 aaPredicted RBP20.25■□□□□ 0.83
HOXA9-201ENST00000343483 TRPM7Q96QT4 1865 aa20.24■□□□□ 0.83
HOXA9-201ENST00000343483 GOLGA8IPA6NC78 632 aa20.24■□□□□ 0.83
HOXA9-201ENST00000343483 GOLGA8JA6NMD2 632 aa20.24■□□□□ 0.83
HOXA9-201ENST00000343483 SASH3O75995 380 aa20.24■□□□□ 0.83
HOXA9-201ENST00000343483 FARP2O94887 1054 aaPredicted RBP20.24■□□□□ 0.83
HOXA9-201ENST00000343483 OATP04181 439 aa20.24■□□□□ 0.83
HOXA9-201ENST00000343483 ATP4AP20648 1035 aa20.24■□□□□ 0.83
HOXA9-201ENST00000343483 SNRPFP62306 86 aaKnown RBP20.24■□□□□ 0.83
HOXA9-201ENST00000343483 PTK2Q05397 1052 aa20.24■□□□□ 0.83
HOXA9-201ENST00000343483 SNAPC2Q13487 334 aa20.24■□□□□ 0.83
HOXA9-201ENST00000343483 KCTD2Q14681 263 aa20.24■□□□□ 0.83
HOXA9-201ENST00000343483 LDLRAD1Q5T700 205 aa20.24■□□□□ 0.83
HOXA9-201ENST00000343483 HVCN1Q96D96 273 aa20.24■□□□□ 0.83
HOXA9-201ENST00000343483 SLC10A4Q96EP9 437 aa20.24■□□□□ 0.83
HOXA9-201ENST00000343483 NTPCRQ9BSD7 190 aaKnown RBP20.24■□□□□ 0.83
HOXA9-201ENST00000343483 INTS2Q9H0H0 1204 aaKnown RBP20.24■□□□□ 0.83
HOXA9-201ENST00000343483 RAB21Q9UL25 225 aa20.24■□□□□ 0.83
HOXA9-201ENST00000343483 A0A087X0T9 212 aa20.23■□□□□ 0.83
HOXA9-201ENST00000343483 ANO9A1A5B4 782 aa20.23■□□□□ 0.83
HOXA9-201ENST00000343483 ANKRD63C9JTQ0 380 aa20.23■□□□□ 0.83
HOXA9-201ENST00000343483 SRGAP2O75044 1071 aa20.23■□□□□ 0.83
HOXA9-201ENST00000343483 MOCS3O95396 460 aa20.23■□□□□ 0.83
HOXA9-201ENST00000343483 FAM228BP0C875 321 aa20.23■□□□□ 0.83
HOXA9-201ENST00000343483 JAM2P57087 298 aa20.23■□□□□ 0.83
HOXA9-201ENST00000343483 EMC2Q15006 297 aa20.23■□□□□ 0.83
HOXA9-201ENST00000343483 NOA1Q8NC60 698 aaKnown RBP20.23■□□□□ 0.83
HOXA9-201ENST00000343483 IFT74Q96LB3 600 aa20.23■□□□□ 0.83
HOXA9-201ENST00000343483 MMP19Q99542 508 aa20.23■□□□□ 0.83
HOXA9-201ENST00000343483 MPHOSPH6Q99547 160 aaKnown RBP20.23■□□□□ 0.83
HOXA9-201ENST00000343483 LUC7LQ9NQ29 371 aaKnown RBP20.23■□□□□ 0.83
HOXA9-201ENST00000343483 BZW2Q9Y6E2 419 aaKnown RBP20.23■□□□□ 0.83
HOXA9-201ENST00000343483 CAPN6Q9Y6Q1 641 aa20.23■□□□□ 0.83
HOXA9-201ENST00000343483 ADGRA3Q8IWK6 1321 aa20.23■□□□□ 0.83
HOXA9-201ENST00000343483 TACC1O75410 805 aa20.23■□□□□ 0.83
HOXA9-201ENST00000343483 CNGA1P29973 690 aa20.23■□□□□ 0.83
HOXA9-201ENST00000343483 ADSSP30520 456 aa20.23■□□□□ 0.83
HOXA9-201ENST00000343483 COPB2P35606 906 aa20.23■□□□□ 0.83
HOXA9-201ENST00000343483 NEDD9Q14511 834 aa20.23■□□□□ 0.83
HOXA9-201ENST00000343483 LY6KQ17RY6 165 aa20.23■□□□□ 0.83
HOXA9-201ENST00000343483 LONRF2Q1L5Z9 754 aa20.23■□□□□ 0.83
HOXA9-201ENST00000343483 TRIM58Q8NG06 486 aa20.23■□□□□ 0.83
HOXA9-201ENST00000343483 EMSYQ7Z589 1322 aa20.23■□□□□ 0.83
HOXA9-201ENST00000343483 GGPS1O95749 300 aa20.22■□□□□ 0.83
HOXA9-201ENST00000343483 RTP1P59025 263 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 154.4 ms