RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 C4orf50Q6ZRC1 276 aa19.91■□□□□ 0.78
SMPD1-201ENST00000342245 KIAA1683Q9H0B3 1180 aa19.91■□□□□ 0.78
SMPD1-201ENST00000342245 PASKQ96RG2 1323 aa19.9■□□□□ 0.78
SMPD1-201ENST00000342245 GIT2Q14161 759 aa19.9■□□□□ 0.78
SMPD1-201ENST00000342245 LIN52Q52LA3 116 aa19.9■□□□□ 0.78
SMPD1-201ENST00000342245 CCNJLQ8IV13 435 aa19.9■□□□□ 0.78
SMPD1-201ENST00000342245 NME8Q8N427 588 aa19.9■□□□□ 0.78
SMPD1-201ENST00000342245 MAGEB6Q8N7X4 407 aa19.9■□□□□ 0.78
SMPD1-201ENST00000342245 CALML4Q96GE6 196 aa19.9■□□□□ 0.78
SMPD1-201ENST00000342245 WDR37Q9Y2I8 494 aa19.9■□□□□ 0.78
SMPD1-201ENST00000342245 ACTL7BQ9Y614 415 aa19.9■□□□□ 0.78
SMPD1-201ENST00000342245 MAGEB2O15479 319 aa19.9■□□□□ 0.78
SMPD1-201ENST00000342245 ENTPD5O75356 428 aa19.9■□□□□ 0.78
SMPD1-201ENST00000342245 EPHB2P29323 1055 aa19.9■□□□□ 0.78
SMPD1-201ENST00000342245 PRKCIP41743 596 aa19.9■□□□□ 0.78
SMPD1-201ENST00000342245 MARSP56192 900 aaKnown RBP19.9■□□□□ 0.78
SMPD1-201ENST00000342245 PTK2Q05397 1052 aa19.9■□□□□ 0.78
SMPD1-201ENST00000342245 CTNNBL1Q8WYA6 563 aaPredicted RBP19.9■□□□□ 0.78
SMPD1-201ENST00000342245 IRGQQ8WZA9 623 aa19.9■□□□□ 0.78
SMPD1-201ENST00000342245 ZNF184Q99676 751 aaPredicted RBP19.9■□□□□ 0.78
SMPD1-201ENST00000342245 OATP04181 439 aa19.89■□□□□ 0.77
SMPD1-201ENST00000342245 ARID5AQ03989 594 aa19.89■□□□□ 0.77
SMPD1-201ENST00000342245 CYFIP1Q7L576 1253 aa19.89■□□□□ 0.77
SMPD1-201ENST00000342245 ANKRD42Q8N9B4 389 aa19.89■□□□□ 0.77
SMPD1-201ENST00000342245 LZTS2Q9BRK4 669 aa19.89■□□□□ 0.77
SMPD1-201ENST00000342245 NDUFA13Q9P0J0 144 aa19.89■□□□□ 0.77
SMPD1-201ENST00000342245 STK17AQ9UEE5 414 aa19.89■□□□□ 0.77
SMPD1-201ENST00000342245 ADAMTSL3P82987 1691 aa19.88■□□□□ 0.77
SMPD1-201ENST00000342245 PHF2O75151 1096 aa19.88■□□□□ 0.77
SMPD1-201ENST00000342245 IFNL2Q8IZJ0 200 aa19.88■□□□□ 0.77
SMPD1-201ENST00000342245 LRRC15Q8TF66 581 aa19.88■□□□□ 0.77
SMPD1-201ENST00000342245 GANQ9H2C0 597 aa19.88■□□□□ 0.77
SMPD1-201ENST00000342245 DHX36Q9H2U1 1008 aaKnown RBP19.88■□□□□ 0.77
SMPD1-201ENST00000342245 GOLPH3Q9H4A6 298 aa19.88■□□□□ 0.77
SMPD1-201ENST00000342245 STX18Q9P2W9 335 aaKnown RBP19.88■□□□□ 0.77
SMPD1-201ENST00000342245 ARMCX3Q9UH62 379 aaPredicted RBP19.88■□□□□ 0.77
SMPD1-201ENST00000342245 PCYOX1Q9UHG3 505 aa19.88■□□□□ 0.77
SMPD1-201ENST00000342245 CHKBQ9Y259 395 aa19.88■□□□□ 0.77
SMPD1-201ENST00000342245 GFPT2O94808 682 aa19.88■□□□□ 0.77
SMPD1-201ENST00000342245 TTLL1O95922 423 aa19.88■□□□□ 0.77
SMPD1-201ENST00000342245 CSF1RP07333 972 aa19.88■□□□□ 0.77
SMPD1-201ENST00000342245 LYNP07948 512 aa19.88■□□□□ 0.77
SMPD1-201ENST00000342245 BRAFP15056 766 aa19.88■□□□□ 0.77
SMPD1-201ENST00000342245 TAC1P20366 129 aa19.88■□□□□ 0.77
SMPD1-201ENST00000342245 MAGEA10P43363 369 aaPredicted RBP19.88■□□□□ 0.77
SMPD1-201ENST00000342245 CDK7P50613 346 aa19.88■□□□□ 0.77
SMPD1-201ENST00000342245 USP46P62068 366 aa19.88■□□□□ 0.77
SMPD1-201ENST00000342245 RNASELQ05823 741 aaKnown RBP19.88■□□□□ 0.77
SMPD1-201ENST00000342245 TMED1Q13445 227 aa19.88■□□□□ 0.77
SMPD1-201ENST00000342245 IRF2BP2Q7Z5L9 587 aa19.88■□□□□ 0.77
SMPD1-201ENST00000342245 TMEM60Q9H2L4 133 aa19.88■□□□□ 0.77
SMPD1-201ENST00000342245 SYNCQ9H7C4 482 aa19.88■□□□□ 0.77
SMPD1-201ENST00000342245 NENFQ9UMX5 172 aa19.88■□□□□ 0.77
SMPD1-201ENST00000342245 TCEA3O75764 348 aa19.87■□□□□ 0.77
SMPD1-201ENST00000342245 RCN1Q15293 331 aa19.87■□□□□ 0.77
SMPD1-201ENST00000342245 ZNF571Q7Z3V5 609 aaPredicted RBP19.87■□□□□ 0.77
SMPD1-201ENST00000342245 GDAP1Q8TB36 358 aa19.87■□□□□ 0.77
SMPD1-201ENST00000342245 NT5C3AQ9H0P0 336 aa19.87■□□□□ 0.77
SMPD1-201ENST00000342245 GGPS1O95749 300 aa19.87■□□□□ 0.77
SMPD1-201ENST00000342245 FGFR4P22455 802 aa19.87■□□□□ 0.77
SMPD1-201ENST00000342245 PTGIRP43119 386 aa19.87■□□□□ 0.77
SMPD1-201ENST00000342245 KHDC1Q4VXA5 237 aaKnown RBP19.87■□□□□ 0.77
SMPD1-201ENST00000342245 PHLDB3Q6NSJ2 640 aa19.87■□□□□ 0.77
SMPD1-201ENST00000342245 DAGLBQ8NCG7 672 aa19.87■□□□□ 0.77
SMPD1-201ENST00000342245 LENG1Q96BZ8 264 aaPredicted RBP19.87■□□□□ 0.77
SMPD1-201ENST00000342245 DDX27Q96GQ7 796 aaKnown RBP19.87■□□□□ 0.77
SMPD1-201ENST00000342245 ASCC2Q9H1I8 757 aaPredicted RBP19.87■□□□□ 0.77
SMPD1-201ENST00000342245 ADGRA3Q8IWK6 1321 aa19.87■□□□□ 0.77
SMPD1-201ENST00000342245 TMEM221A6NGB7 291 aa19.86■□□□□ 0.77
SMPD1-201ENST00000342245 ZWINTO95229 277 aa19.86■□□□□ 0.77
SMPD1-201ENST00000342245 EPS15P42566 896 aa19.86■□□□□ 0.77
SMPD1-201ENST00000342245 CDR2Q01850 454 aa19.86■□□□□ 0.77
SMPD1-201ENST00000342245 RGS9BPQ6ZS82 235 aa19.86■□□□□ 0.77
SMPD1-201ENST00000342245 ST13P4Q8IZP2 240 aaPredicted RBP19.86■□□□□ 0.77
SMPD1-201ENST00000342245 LRRC43Q8N309 656 aa19.86■□□□□ 0.77
SMPD1-201ENST00000342245 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.86■□□□□ 0.77
SMPD1-201ENST00000342245 ART4Q93070 314 aa19.86■□□□□ 0.77
SMPD1-201ENST00000342245 MAF1Q9H063 256 aa19.86■□□□□ 0.77
SMPD1-201ENST00000342245 TBC1D30Q9Y2I9 924 aa19.86■□□□□ 0.77
SMPD1-201ENST00000342245 MAFGO15525 162 aa19.86■□□□□ 0.77
SMPD1-201ENST00000342245 ASLP04424 464 aa19.86■□□□□ 0.77
SMPD1-201ENST00000342245 T-ENOLP0DO92 83 aa19.86■□□□□ 0.77
SMPD1-201ENST00000342245 YY1P25490 414 aa19.86■□□□□ 0.77
SMPD1-201ENST00000342245 RPL21P46778 160 aaKnown RBP19.86■□□□□ 0.77
SMPD1-201ENST00000342245 SESN3P58005 492 aa19.86■□□□□ 0.77
SMPD1-201ENST00000342245 BPIFB4P59827 614 aa19.86■□□□□ 0.77
SMPD1-201ENST00000342245 SULT2A1Q06520 285 aa19.86■□□□□ 0.77
SMPD1-201ENST00000342245 RASA3Q14644 834 aa19.86■□□□□ 0.77
SMPD1-201ENST00000342245 TXNRD1Q16881 649 aa19.86■□□□□ 0.77
SMPD1-201ENST00000342245 ZNF568Q3ZCX4 644 aa19.86■□□□□ 0.77
SMPD1-201ENST00000342245 TMEM259Q4ZIN3 620 aa19.86■□□□□ 0.77
SMPD1-201ENST00000342245 CCDC174Q6PII3 467 aa19.86■□□□□ 0.77
SMPD1-201ENST00000342245 HS2ST1Q7LGA3 356 aa19.86■□□□□ 0.77
SMPD1-201ENST00000342245 STMN2Q93045 179 aa19.86■□□□□ 0.77
SMPD1-201ENST00000342245 MAML3Q96JK9 1138 aa19.86■□□□□ 0.77
SMPD1-201ENST00000342245 ABCF2Q9UG63 623 aa19.86■□□□□ 0.77
SMPD1-201ENST00000342245 ALS2Q96Q42 1657 aa19.86■□□□□ 0.77
SMPD1-201ENST00000342245 DDX3YO15523 660 aaKnown RBP19.85■□□□□ 0.77
SMPD1-201ENST00000342245 PSMG1O95456 288 aa19.85■□□□□ 0.77
SMPD1-201ENST00000342245 OR52Z1P0C646 297 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms