RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 ATP2C1P98194 919 aaPredicted RBP8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 LRRC41Q15345 812 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 TAF1CQ15572 869 aaPredicted RBP8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 KLHL38Q2WGJ6 581 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 EFHC2Q5JST6 749 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 SFR1Q86XK3 245 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 ANKRD13AQ8IZ07 590 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 GIPC2Q8TF65 315 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 NSUN4Q96CB9 384 aaKnown RBP8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 PARD6BQ9BYG5 372 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 PPCSQ9HAB8 311 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 AXIN2Q9Y2T1 843 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 PPME1Q9Y570 386 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 PCDHA13Q9Y5I0 950 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 SYNJ2BP-COX16A0A087WUM0 186 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 GRID2IPA4D2P6 1211 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 GOLGA8JA6NMD2 632 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 USP27XA6NNY8 438 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 HMGB3O15347 200 aaKnown RBP8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 P4HA2O15460 535 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 LUC7L3O95232 432 aaKnown RBP8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 IL18RAPO95256 599 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 H2AFXP16104 143 aaPredicted RBP8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 VAMP7P51809 220 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 GNGT1P63211 74 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 BASP1P80723 227 aaKnown RBP8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 ZNF543Q08ER8 600 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 PSMD6Q15008 389 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 PRR5LQ6MZQ0 368 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 TBC1D10CQ8IV04 446 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 CCDC197Q8NCU1 140 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 SPDYE1Q8NFV5 336 aaPredicted RBP8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 PARD3BQ8TEW8 1205 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 SCFD2Q8WU76 684 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 FMO2Q99518 471 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 SLITRK6Q9H5Y7 841 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 NGRNQ9NPE2 291 aaKnown RBP8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 MTMR4Q9NYA4 1195 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 COX16Q9P0S2 106 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 GABBR1Q9UBS5 961 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 RRP15Q9Y3B9 282 aaKnown RBP8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 ARHGAP42A6NI28 874 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 SLC1A1P43005 524 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 STAT5BP51692 787 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 FOXO4P98177 505 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 SFSWAPQ12872 951 aaKnown RBP8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 Q3C1V9 767 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 EEPD1Q7L9B9 569 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 RAB42Q8N4Z0 105 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 TRIM15Q9C019 465 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 RPAP3Q9H6T3 665 aaPredicted RBP8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 TECPR2O15040 1411 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 TMEM131LA2VDJ0 1609 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 PREX1Q8TCU6 1659 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 PPFIA2O75334 1257 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 TADA3O75528 432 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 CAMTA2O94983 1202 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 GCLCP48506 637 aaPredicted RBP8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 PPP4CP60510 307 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 DEUP1Q05D60 604 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 COASYQ13057 564 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 ARID5BQ14865 1188 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 KRT31Q15323 416 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 TAF11Q15544 211 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 E4F1Q66K89 784 aaPredicted RBP8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 FBXL13Q8NEE6 735 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 MIPOL1Q8TD10 442 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 OTUD5Q96G74 571 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 GOLPH3LQ9H4A5 285 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 OLFML3Q9NRN5 406 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 CNOT8Q9UFF9 292 aaKnown RBP8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 CNOT7Q9UIV1 285 aaKnown RBP8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 LSM7Q9UK45 103 aaKnown RBP8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 SLC13A4Q9UKG4 626 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 DAGLAQ9Y4D2 1042 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 CPS1P31327 1500 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 SPATA31D1Q6ZQQ2 1576 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 CYP2D7A0A087X1C5 515 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 CYBBP04839 570 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 CCT5P48643 541 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 DR1Q01658 176 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 EPHA10Q5JZY3 1008 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 ADGRF4Q8IZF3 695 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 PYROXD1Q8WU10 500 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 LXNQ9BS40 222 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 MKNK1Q9BUB5 465 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 TRIM54Q9BYV2 358 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 FOXP3Q9BZS1 431 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 WNT8AQ9H1J5 351 aa8.23□□□□□ -1.09
ATP2B4-201ENST00000341360 FAM187AA6NFU0 413 aa8.22□□□□□ -1.09
ATP2B4-201ENST00000341360 SORBS3O60504 671 aa8.22□□□□□ -1.09
ATP2B4-201ENST00000341360 CD58P19256 250 aa8.22□□□□□ -1.09
ATP2B4-201ENST00000341360 CDC27P30260 824 aa8.22□□□□□ -1.09
ATP2B4-201ENST00000341360 ARPP19P56211 112 aa8.22□□□□□ -1.09
ATP2B4-201ENST00000341360 NOP14P78316 857 aaKnown RBP8.22□□□□□ -1.09
ATP2B4-201ENST00000341360 CDK17Q00537 523 aa8.22□□□□□ -1.09
ATP2B4-201ENST00000341360 C4orf22Q6V702 233 aa8.22□□□□□ -1.09
ATP2B4-201ENST00000341360 SYDE1Q6ZW31 735 aaPredicted RBP8.22□□□□□ -1.09
ATP2B4-201ENST00000341360 POLR3FQ9H1D9 316 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms