RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 NIPA1Q7RTP0 329 aa15.77■□□□□ 0.12
TDP2-201ENST00000341060 DDX42Q86XP3 938 aaKnown RBP eCLIP15.77■□□□□ 0.12
TDP2-201ENST00000341060 C12orf56Q8IXR9 622 aa15.77■□□□□ 0.12
TDP2-201ENST00000341060 OGFOD1Q8N543 542 aa15.77■□□□□ 0.12
TDP2-201ENST00000341060 RDH13Q8NBN7 331 aa15.77■□□□□ 0.12
TDP2-201ENST00000341060 CARD9Q9H257 536 aa15.77■□□□□ 0.12
TDP2-201ENST00000341060 NEUROG2Q9H2A3 272 aa15.77■□□□□ 0.12
TDP2-201ENST00000341060 DDX39AO00148 427 aaKnown RBP15.77■□□□□ 0.11
TDP2-201ENST00000341060 DHX15O43143 795 aaKnown RBP15.77■□□□□ 0.11
TDP2-201ENST00000341060 FGGP02679 453 aa15.77■□□□□ 0.11
TDP2-201ENST00000341060 POU5F1Q01860 360 aaKnown RBP15.77■□□□□ 0.11
TDP2-201ENST00000341060 PLS1Q14651 629 aa15.77■□□□□ 0.11
TDP2-201ENST00000341060 GRIPAP1Q4V328 841 aa15.77■□□□□ 0.11
TDP2-201ENST00000341060 CEP85LQ5SZL2 805 aa15.77■□□□□ 0.11
TDP2-201ENST00000341060 TTC19Q6DKK2 380 aaPredicted RBP15.77■□□□□ 0.11
TDP2-201ENST00000341060 SAMD1Q6SPF0 538 aaPredicted RBP15.77■□□□□ 0.11
TDP2-201ENST00000341060 PALB2Q86YC2 1186 aa15.77■□□□□ 0.11
TDP2-201ENST00000341060 CDAN1Q8IWY9 1227 aa15.77■□□□□ 0.11
TDP2-201ENST00000341060 ARHGEF26Q96DR7 871 aa15.77■□□□□ 0.11
TDP2-201ENST00000341060 GLIS2Q9BZE0 524 aaPredicted RBP15.77■□□□□ 0.11
TDP2-201ENST00000341060 THAP2Q9H0W7 228 aa15.77■□□□□ 0.11
TDP2-201ENST00000341060 DBR1Q9UK59 544 aaKnown RBP15.77■□□□□ 0.11
TDP2-201ENST00000341060 CCPG1Q9ULG6 757 aa15.77■□□□□ 0.11
TDP2-201ENST00000341060 ZHX2Q9Y6X8 837 aa15.77■□□□□ 0.11
TDP2-201ENST00000341060 ZNF536O15090 1300 aa15.77■□□□□ 0.11
TDP2-201ENST00000341060 COL4A5P29400 1685 aa15.77■□□□□ 0.11
TDP2-201ENST00000341060 H0YGN5 161 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 FOXN3O00409 490 aaPredicted RBP15.76■□□□□ 0.11
TDP2-201ENST00000341060 EBAG9O00559 213 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 P4HA2O15460 535 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 LRRN2O75325 713 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 MAGEA9P43362 315 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 ATP1A2P50993 1020 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 HADHBP55084 474 aaKnown RBP15.76■□□□□ 0.11
TDP2-201ENST00000341060 DLG4P78352 724 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 TNIP1Q15025 636 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 UAP1Q16222 522 aaPredicted RBP15.76■□□□□ 0.11
TDP2-201ENST00000341060 RHOT2Q8IXI1 618 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 VTI1AQ96AJ9 217 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 RNPC3Q96LT9 517 aaKnown RBP15.76■□□□□ 0.11
TDP2-201ENST00000341060 AGBL1Q96MI9 1066 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 TMEM39BQ9GZU3 492 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 TMBIM4Q9HC24 238 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 TAS2R14Q9NYV8 317 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 COL20A1Q9P218 1284 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 NFS1Q9Y697 457 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 EMSYQ7Z589 1322 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 PARP14Q460N5 1801 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 ARID2Q68CP9 1835 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 GOLGA6L10A6NI86 522 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 TTI1O43156 1089 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 RARRES1P49788 294 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 GHRHRQ02643 423 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 CETN1Q12798 172 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 ITGB3BPQ13352 177 aaPredicted RBP15.76■□□□□ 0.11
TDP2-201ENST00000341060 MTMR3Q13615 1198 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 SKIDA1Q1XH10 827 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 MIGA2Q7L4E1 593 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 FAM83AQ86UY5 434 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 NAP1L3Q99457 506 aaPredicted RBP15.76■□□□□ 0.11
TDP2-201ENST00000341060 AGPAT1Q99943 283 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 SGIP1Q9BQI5 828 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 FAM107BQ9H098 131 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 VEZTQ9HBM0 779 aa15.76■□□□□ 0.11
TDP2-201ENST00000341060 SEPT11Q9NVA2 429 aaKnown RBP15.76■□□□□ 0.11
TDP2-201ENST00000341060 UTP11Q9Y3A2 253 aaKnown RBP15.76■□□□□ 0.11
TDP2-201ENST00000341060 KIAA1217Q5T5P2 1943 aa15.75■□□□□ 0.11
TDP2-201ENST00000341060 DAPK3O43293 454 aa15.75■□□□□ 0.11
TDP2-201ENST00000341060 RAD17O75943 681 aa15.75■□□□□ 0.11
TDP2-201ENST00000341060 ASNSP08243 561 aa15.75■□□□□ 0.11
TDP2-201ENST00000341060 PLS3P13797 630 aa15.75■□□□□ 0.11
TDP2-201ENST00000341060 CTNNA1P35221 906 aaKnown RBP15.75■□□□□ 0.11
TDP2-201ENST00000341060 VAMP7P51809 220 aa15.75■□□□□ 0.11
TDP2-201ENST00000341060 PTENP60484 403 aa15.75■□□□□ 0.11
TDP2-201ENST00000341060 PPP2R5EQ16537 467 aa15.75■□□□□ 0.11
TDP2-201ENST00000341060 EPC2Q52LR7 807 aa15.75■□□□□ 0.11
TDP2-201ENST00000341060 IL31RAQ8NI17 732 aa15.75■□□□□ 0.11
TDP2-201ENST00000341060 ACCSQ96QU6 501 aa15.75■□□□□ 0.11
TDP2-201ENST00000341060 FAM114A2Q9NRY5 505 aa15.75■□□□□ 0.11
TDP2-201ENST00000341060 COG5Q9UP83 839 aa15.75■□□□□ 0.11
TDP2-201ENST00000341060 TISP43B9A030 160 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 NFIBO00712 420 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 MAPK13O15264 365 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 LYPLA2O95372 231 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 TGFB2P61812 414 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 PPP3CAQ08209 521 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 CLUL1Q15846 466 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 TKFCQ3LXA3 575 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 PCNX4Q63HM2 1172 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 MAEAQ7L5Y9 396 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 EFCAB13Q8IY85 973 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 PROCA1Q8NCQ7 364 aaPredicted RBP15.74■□□□□ 0.11
TDP2-201ENST00000341060 CBWD1Q9BRT8 395 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 CELF4Q9BZC1 486 aaKnown RBP15.74■□□□□ 0.11
TDP2-201ENST00000341060 ST6GALNAC4Q9H4F1 302 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 PCIF1Q9H4Z3 704 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 AGO4Q9HCK5 861 aaKnown RBP15.74■□□□□ 0.11
TDP2-201ENST00000341060 UBE2TQ9NPD8 197 aaPredicted RBP15.74■□□□□ 0.11
TDP2-201ENST00000341060 PKD2L1Q9P0L9 805 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 PFASO15067 1338 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms