RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 FAM198AQ9UFP1 575 aa16.57■□□□□ 0.24
LIMK2-203ENST00000340552 PGRMC1O00264 195 aaKnown RBP16.56■□□□□ 0.24
LIMK2-203ENST00000340552 KRIT1O00522 736 aa16.56■□□□□ 0.24
LIMK2-203ENST00000340552 RGS16O15492 202 aaPredicted RBP16.56■□□□□ 0.24
LIMK2-203ENST00000340552 GM2AP17900 193 aa16.56■□□□□ 0.24
LIMK2-203ENST00000340552 PDE4DQ08499 809 aa16.56■□□□□ 0.24
LIMK2-203ENST00000340552 CNGA2Q16280 664 aa16.56■□□□□ 0.24
LIMK2-203ENST00000340552 MAIP1Q8WWC4 291 aa16.56■□□□□ 0.24
LIMK2-203ENST00000340552 RNF25Q96BH1 459 aaPredicted RBP16.56■□□□□ 0.24
LIMK2-203ENST00000340552 TRIM51Q9BSJ1 452 aa16.56■□□□□ 0.24
LIMK2-203ENST00000340552 DHX36Q9H2U1 1008 aaKnown RBP16.56■□□□□ 0.24
LIMK2-203ENST00000340552 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.56■□□□□ 0.24
LIMK2-203ENST00000340552 PCDHA4Q9UN74 947 aa16.56■□□□□ 0.24
LIMK2-203ENST00000340552 DDTLA6NHG4 134 aaPredicted RBP16.56■□□□□ 0.24
LIMK2-203ENST00000340552 NUDT17P0C025 328 aa16.56■□□□□ 0.24
LIMK2-203ENST00000340552 CCNB1P14635 433 aa16.56■□□□□ 0.24
LIMK2-203ENST00000340552 ACADSP16219 412 aa16.56■□□□□ 0.24
LIMK2-203ENST00000340552 SLC9C1Q4G0N8 1177 aa16.56■□□□□ 0.24
LIMK2-203ENST00000340552 UBAP2Q5T6F2 1119 aaKnown RBP16.56■□□□□ 0.24
LIMK2-203ENST00000340552 APBB1IPQ7Z5R6 666 aaPredicted RBP16.56■□□□□ 0.24
LIMK2-203ENST00000340552 C4orf32Q8N8J7 132 aa16.56■□□□□ 0.24
LIMK2-203ENST00000340552 STK32AQ8WU08 396 aa16.56■□□□□ 0.24
LIMK2-203ENST00000340552 HPS3Q969F9 1004 aa16.56■□□□□ 0.24
LIMK2-203ENST00000340552 RMDN2Q96LZ7 410 aa16.56■□□□□ 0.24
LIMK2-203ENST00000340552 FGD4Q96M96 766 aa16.56■□□□□ 0.24
LIMK2-203ENST00000340552 SEMA6BQ9H3T3 888 aa16.56■□□□□ 0.24
LIMK2-203ENST00000340552 RXFP1Q9HBX9 757 aa16.56■□□□□ 0.24
LIMK2-203ENST00000340552 BARHL2Q9NY43 387 aa16.56■□□□□ 0.24
LIMK2-203ENST00000340552 A0A087X0T9 212 aa16.55■□□□□ 0.24
LIMK2-203ENST00000340552 GJB6O95452 261 aa16.55■□□□□ 0.24
LIMK2-203ENST00000340552 TTLL1O95922 423 aa16.55■□□□□ 0.24
LIMK2-203ENST00000340552 FAM228BP0C875 321 aa16.55■□□□□ 0.24
LIMK2-203ENST00000340552 ZBTB48P10074 688 aaPredicted RBP16.55■□□□□ 0.24
LIMK2-203ENST00000340552 USP11P51784 963 aa16.55■□□□□ 0.24
LIMK2-203ENST00000340552 CCDC84Q86UT8 332 aaPredicted RBP16.55■□□□□ 0.24
LIMK2-203ENST00000340552 METTL13Q8N6R0 699 aa16.55■□□□□ 0.24
LIMK2-203ENST00000340552 ANKLE1Q8NAG6 615 aa16.55■□□□□ 0.24
LIMK2-203ENST00000340552 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.55■□□□□ 0.245e-7■■■■■ 31.1
LIMK2-203ENST00000340552 DNAJC18Q9H819 358 aa16.55■□□□□ 0.24
LIMK2-203ENST00000340552 FAM114A2Q9NRY5 505 aa16.55■□□□□ 0.24
LIMK2-203ENST00000340552 CYP39A1Q9NYL5 469 aa16.55■□□□□ 0.24
LIMK2-203ENST00000340552 TCP11X1B4DZS4 312 aa16.55■□□□□ 0.24
LIMK2-203ENST00000340552 E7ENQ6 273 aa16.55■□□□□ 0.24
LIMK2-203ENST00000340552 LRRC14Q15048 493 aa16.55■□□□□ 0.24
LIMK2-203ENST00000340552 TDRD3Q9H7E2 651 aaKnown RBP16.55■□□□□ 0.24
LIMK2-203ENST00000340552 ETNK1Q9HBU6 452 aa16.55■□□□□ 0.24
LIMK2-203ENST00000340552 GOPCQ9HD26 462 aa16.55■□□□□ 0.24
LIMK2-203ENST00000340552 PCDHGA4Q9Y5G9 962 aa16.55■□□□□ 0.24
LIMK2-203ENST00000340552 SMARCA1P28370 1054 aa16.55■□□□□ 0.24
LIMK2-203ENST00000340552 TRAPPC10P48553 1259 aa16.55■□□□□ 0.24
LIMK2-203ENST00000340552 MAN2A1Q16706 1144 aa16.55■□□□□ 0.24
LIMK2-203ENST00000340552 LARGE2Q8N3Y3 721 aa16.55■□□□□ 0.24
LIMK2-203ENST00000340552 RASGRP4Q8TDF6 673 aa16.55■□□□□ 0.24
LIMK2-203ENST00000340552 ASAP3Q8TDY4 903 aa16.55■□□□□ 0.24
LIMK2-203ENST00000340552 FAM136AQ96C01 138 aa16.55■□□□□ 0.24
LIMK2-203ENST00000340552 UBA5Q9GZZ9 404 aa16.55■□□□□ 0.24
LIMK2-203ENST00000340552 ZMYND12Q9H0C1 365 aa16.55■□□□□ 0.24
LIMK2-203ENST00000340552 VAT1LQ9HCJ6 419 aa16.55■□□□□ 0.24
LIMK2-203ENST00000340552 ZNF277Q9NRM2 450 aaPredicted RBP16.55■□□□□ 0.24
LIMK2-203ENST00000340552 PI4KBQ9UBF8 816 aa16.55■□□□□ 0.24
LIMK2-203ENST00000340552 SIPA1L1O43166 1804 aa16.54■□□□□ 0.24
LIMK2-203ENST00000340552 PSME4Q14997 1843 aa16.54■□□□□ 0.24
LIMK2-203ENST00000340552 FAM196BA6NMK8 535 aa16.54■□□□□ 0.24
LIMK2-203ENST00000340552 CCDC169A6NNP5 214 aa16.54■□□□□ 0.24
LIMK2-203ENST00000340552 CCDC188H7C350 402 aa16.54■□□□□ 0.24
LIMK2-203ENST00000340552 SERPING1P05155 500 aa16.54■□□□□ 0.24
LIMK2-203ENST00000340552 DYNC1I2Q13409 638 aaKnown RBP16.54■□□□□ 0.24
LIMK2-203ENST00000340552 SLC18A3Q16572 532 aa16.54■□□□□ 0.24
LIMK2-203ENST00000340552 SPDYCQ5MJ68 293 aa16.54■□□□□ 0.24
LIMK2-203ENST00000340552 SH3BP5LQ7L8J4 393 aa16.54■□□□□ 0.24
LIMK2-203ENST00000340552 SDCCAG8Q86SQ7 713 aaPredicted RBP16.54■□□□□ 0.24
LIMK2-203ENST00000340552 PIGOQ8TEQ8 1089 aa16.54■□□□□ 0.24
LIMK2-203ENST00000340552 DNAJC9Q8WXX5 260 aa16.54■□□□□ 0.24
LIMK2-203ENST00000340552 CCDC17Q96LX7 622 aa16.54■□□□□ 0.24
LIMK2-203ENST00000340552 SLITRK6Q9H5Y7 841 aa16.54■□□□□ 0.24
LIMK2-203ENST00000340552 LUC7LQ9NQ29 371 aaKnown RBP16.54■□□□□ 0.24
LIMK2-203ENST00000340552 ARL2BPQ9Y2Y0 163 aa16.54■□□□□ 0.24
LIMK2-203ENST00000340552 UTP11Q9Y3A2 253 aaKnown RBP16.54■□□□□ 0.24
LIMK2-203ENST00000340552 FRMPD2Q68DX3 1309 aaPredicted RBP16.54■□□□□ 0.24
LIMK2-203ENST00000340552 NPM3O75607 178 aaKnown RBP16.54■□□□□ 0.24
LIMK2-203ENST00000340552 MGAT5Q09328 741 aa16.54■□□□□ 0.24
LIMK2-203ENST00000340552 KCNMA1Q12791 1236 aa16.54■□□□□ 0.24
LIMK2-203ENST00000340552 ARL6IP4Q66PJ3 421 aaKnown RBP16.54■□□□□ 0.24
LIMK2-203ENST00000340552 NEK9Q8TD19 979 aa16.54■□□□□ 0.24
LIMK2-203ENST00000340552 DTNBP1Q96EV8 351 aa16.54■□□□□ 0.24
LIMK2-203ENST00000340552 PRMT6Q96LA8 375 aaPredicted RBP16.54■□□□□ 0.24
LIMK2-203ENST00000340552 TRAPPC9Q96Q05 1148 aa16.54■□□□□ 0.24
LIMK2-203ENST00000340552 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.54■□□□□ 0.24
LIMK2-203ENST00000340552 PABPC3Q9H361 631 aaKnown RBP16.54■□□□□ 0.24
LIMK2-203ENST00000340552 SEC63Q9UGP8 760 aaKnown RBP16.54■□□□□ 0.24
LIMK2-203ENST00000340552 PDLIM1O00151 329 aa16.53■□□□□ 0.24
LIMK2-203ENST00000340552 RAD17O75943 681 aa16.53■□□□□ 0.24
LIMK2-203ENST00000340552 AGTP01019 485 aa16.53■□□□□ 0.24
LIMK2-203ENST00000340552 MYL1P05976 194 aa16.53■□□□□ 0.24
LIMK2-203ENST00000340552 PTDSS1P48651 473 aaKnown RBP16.53■□□□□ 0.24
LIMK2-203ENST00000340552 PMS2P54278 862 aa16.53■□□□□ 0.24
LIMK2-203ENST00000340552 MYBPC3Q14896 1274 aa16.53■□□□□ 0.24
LIMK2-203ENST00000340552 SFMBT2Q5VUG0 894 aa16.53■□□□□ 0.24
LIMK2-203ENST00000340552 DENND2CQ68D51 928 aa16.53■□□□□ 0.24
LIMK2-203ENST00000340552 GALNT17Q6IS24 598 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms