RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 A0A0U1RQF3 1178 aa21.23■□□□□ 0.99
SYNE4-202ENST00000340477 ARHGEF15O94989 841 aa21.23■□□□□ 0.99
SYNE4-202ENST00000340477 EOMESO95936 686 aa21.23■□□□□ 0.99
SYNE4-202ENST00000340477 PLA2G4BP0C869 781 aa21.23■□□□□ 0.99
SYNE4-202ENST00000340477 CTNNB1P35222 781 aa21.23■□□□□ 0.99
SYNE4-202ENST00000340477 NAMPTP43490 491 aa21.23■□□□□ 0.99
SYNE4-202ENST00000340477 FAM189BP81408 668 aa21.23■□□□□ 0.99
SYNE4-202ENST00000340477 PAN2Q504Q3 1202 aaKnown RBP21.23■□□□□ 0.99
SYNE4-202ENST00000340477 ATL3Q6DD88 541 aa21.23■□□□□ 0.99
SYNE4-202ENST00000340477 NOTUMQ6P988 496 aa21.23■□□□□ 0.99
SYNE4-202ENST00000340477 ECHDC2Q86YB7 292 aa21.23■□□□□ 0.99
SYNE4-202ENST00000340477 ZNF689Q96CS4 500 aaPredicted RBP21.23■□□□□ 0.99
SYNE4-202ENST00000340477 CCDC51Q96ER9 411 aa21.23■□□□□ 0.99
SYNE4-202ENST00000340477 CSRNP2Q9H175 543 aa21.23■□□□□ 0.99
SYNE4-202ENST00000340477 MINDY3Q9H8M7 445 aa21.23■□□□□ 0.99
SYNE4-202ENST00000340477 RC3H2Q9HBD1 1191 aaKnown RBP21.23■□□□□ 0.99
SYNE4-202ENST00000340477 PRMT7Q9NVM4 692 aaPredicted RBP21.23■□□□□ 0.99
SYNE4-202ENST00000340477 FNDC1Q4ZHG4 1894 aaPredicted RBP21.23■□□□□ 0.99
SYNE4-202ENST00000340477 MYH11P35749 1972 aa21.23■□□□□ 0.99
SYNE4-202ENST00000340477 CHD9Q3L8U1 2897 aa21.22■□□□□ 0.99
SYNE4-202ENST00000340477 TBKBP1A7MCY6 615 aa21.22■□□□□ 0.99
SYNE4-202ENST00000340477 MBTD1Q05BQ5 628 aa21.22■□□□□ 0.99
SYNE4-202ENST00000340477 DMP1Q13316 513 aaPredicted RBP21.22■□□□□ 0.99
SYNE4-202ENST00000340477 KARSQ15046 597 aaKnown RBP21.22■□□□□ 0.99
SYNE4-202ENST00000340477 TMEM132AQ24JP5 1023 aa21.22■□□□□ 0.99
SYNE4-202ENST00000340477 SPOUT1Q5T280 376 aaKnown RBP21.22■□□□□ 0.99
SYNE4-202ENST00000340477 RINT1Q6NUQ1 792 aa21.22■□□□□ 0.99
SYNE4-202ENST00000340477 KCNK18Q7Z418 384 aa21.22■□□□□ 0.99
SYNE4-202ENST00000340477 CRIPAKQ8N1N5 446 aa21.22■□□□□ 0.99
SYNE4-202ENST00000340477 RSPH1Q8WYR4 309 aa21.22■□□□□ 0.99
SYNE4-202ENST00000340477 PGBD4Q96DM1 585 aa21.22■□□□□ 0.99
SYNE4-202ENST00000340477 C17orf80Q9BSJ5 609 aa21.22■□□□□ 0.99
SYNE4-202ENST00000340477 TRAIPQ9BWF2 469 aa21.22■□□□□ 0.99
SYNE4-202ENST00000340477 CCSER1Q9C0I3 900 aa21.22■□□□□ 0.99
SYNE4-202ENST00000340477 CFAP45Q9UL16 551 aa21.22■□□□□ 0.99
SYNE4-202ENST00000340477 PHLPP2Q6ZVD8 1323 aa21.22■□□□□ 0.99
SYNE4-202ENST00000340477 SPTLC2O15270 562 aa21.21■□□□□ 0.99
SYNE4-202ENST00000340477 HIP1RO75146 1068 aa21.21■□□□□ 0.99
SYNE4-202ENST00000340477 YEATS4O95619 227 aa21.21■□□□□ 0.99
SYNE4-202ENST00000340477 PLCG1P19174 1290 aa21.21■□□□□ 0.99
SYNE4-202ENST00000340477 GRIN1Q05586 938 aa21.21■□□□□ 0.99
SYNE4-202ENST00000340477 CDCA2Q69YH5 1023 aaPredicted RBP21.21■□□□□ 0.99
SYNE4-202ENST00000340477 TMEM192Q8IY95 271 aa21.21■□□□□ 0.99
SYNE4-202ENST00000340477 SYT2Q8N9I0 419 aaPredicted RBP21.21■□□□□ 0.99
SYNE4-202ENST00000340477 MAFAQ8NHW3 353 aaPredicted RBP21.21■□□□□ 0.99
SYNE4-202ENST00000340477 SYMPKQ92797 1274 aaKnown RBP21.21■□□□□ 0.99
SYNE4-202ENST00000340477 PRIMPOLQ96LW4 560 aa21.21■□□□□ 0.99
SYNE4-202ENST00000340477 RUSC1Q9BVN2 902 aa21.21■□□□□ 0.99
SYNE4-202ENST00000340477 TMEM117Q9H0C3 514 aa21.21■□□□□ 0.99
SYNE4-202ENST00000340477 AAASQ9NRG9 546 aa21.21■□□□□ 0.99
SYNE4-202ENST00000340477 FAM105AQ9NUU6 356 aa21.21■□□□□ 0.99
SYNE4-202ENST00000340477 KCNG1Q9UIX4 513 aa21.21■□□□□ 0.99
SYNE4-202ENST00000340477 ATP6V1DQ9Y5K8 247 aa21.21■□□□□ 0.99
SYNE4-202ENST00000340477 KIAA1671Q9BY89 1806 aa21.2■□□□□ 0.98
SYNE4-202ENST00000340477 CDH23Q9H251 3354 aa21.2■□□□□ 0.98
SYNE4-202ENST00000340477 TSPAN1O60635 241 aa21.2■□□□□ 0.98
SYNE4-202ENST00000340477 KRT18P05783 430 aaKnown RBP21.2■□□□□ 0.98
SYNE4-202ENST00000340477 FGFR1P11362 822 aa21.2■□□□□ 0.98
SYNE4-202ENST00000340477 GUCY2CP25092 1073 aa21.2■□□□□ 0.98
SYNE4-202ENST00000340477 EFNA5P52803 228 aa21.2■□□□□ 0.98
SYNE4-202ENST00000340477 MAPK6Q16659 721 aa21.2■□□□□ 0.98
SYNE4-202ENST00000340477 FOXD4L6Q3SYB3 417 aaPredicted RBP21.2■□□□□ 0.98
SYNE4-202ENST00000340477 EPC2Q52LR7 807 aa21.2■□□□□ 0.98
SYNE4-202ENST00000340477 FOXD4L3Q6VB84 417 aaPredicted RBP21.2■□□□□ 0.98
SYNE4-202ENST00000340477 HACE1Q8IYU2 909 aa21.2■□□□□ 0.98
SYNE4-202ENST00000340477 LINC00301Q8NCQ3 95 aa21.2■□□□□ 0.98
SYNE4-202ENST00000340477 CNNM3Q8NE01 707 aa21.2■□□□□ 0.98
SYNE4-202ENST00000340477 KCNG4Q8TDN1 519 aa21.2■□□□□ 0.98
SYNE4-202ENST00000340477 GDPD5Q8WTR4 605 aa21.2■□□□□ 0.98
SYNE4-202ENST00000340477 C11orf84Q9BUA3 381 aaPredicted RBP21.2■□□□□ 0.98
SYNE4-202ENST00000340477 MRPL9Q9BYD2 267 aaKnown RBP21.2■□□□□ 0.98
SYNE4-202ENST00000340477 TRIM6Q9C030 488 aaPredicted RBP21.2■□□□□ 0.98
SYNE4-202ENST00000340477 C17orf75Q9HAS0 396 aa21.2■□□□□ 0.98
SYNE4-202ENST00000340477 TFIP11Q9UBB9 837 aaKnown RBP21.2■□□□□ 0.98
SYNE4-202ENST00000340477 DAXXQ9UER7 740 aaPredicted RBP21.2■□□□□ 0.98
SYNE4-202ENST00000340477 CCDC169A6NNP5 214 aa21.19■□□□□ 0.98
SYNE4-202ENST00000340477 PPP6R2O75170 966 aa21.19■□□□□ 0.98
SYNE4-202ENST00000340477 RB1P06400 928 aa21.19■□□□□ 0.98
SYNE4-202ENST00000340477 GATMP50440 423 aa21.19■□□□□ 0.98
SYNE4-202ENST00000340477 SPECC1Q5M775 1068 aa21.19■□□□□ 0.98
SYNE4-202ENST00000340477 C1orf186Q6ZWK4 172 aa21.19■□□□□ 0.98
SYNE4-202ENST00000340477 LRRC43Q8N309 656 aa21.19■□□□□ 0.98
SYNE4-202ENST00000340477 LARP4BQ92615 738 aaKnown RBP21.19■□□□□ 0.98
SYNE4-202ENST00000340477 CLP1Q92989 425 aaKnown RBP21.19■□□□□ 0.98
SYNE4-202ENST00000340477 EPSTI1Q96J88 318 aa21.19■□□□□ 0.98
SYNE4-202ENST00000340477 CLIC6Q96NY7 704 aa21.19■□□□□ 0.98
SYNE4-202ENST00000340477 STK17AQ9UEE5 414 aa21.19■□□□□ 0.98
SYNE4-202ENST00000340477 PCDHB2Q9Y5E7 798 aa21.19■□□□□ 0.98
SYNE4-202ENST00000340477 MRPL42Q9Y6G3 142 aaKnown RBP21.19■□□□□ 0.98
SYNE4-202ENST00000340477 EPOPA6NHQ4 379 aa21.18■□□□□ 0.98
SYNE4-202ENST00000340477 PRKCBP05771 671 aa21.18■□□□□ 0.98
SYNE4-202ENST00000340477 LIG1P18858 919 aa21.18■□□□□ 0.98
SYNE4-202ENST00000340477 BMPR1AP36894 532 aa21.18■□□□□ 0.98
SYNE4-202ENST00000340477 SMTNP53814 917 aa21.18■□□□□ 0.98
SYNE4-202ENST00000340477 SLC12A3P55017 1021 aa21.18■□□□□ 0.98
SYNE4-202ENST00000340477 PEX3P56589 373 aa21.18■□□□□ 0.98
SYNE4-202ENST00000340477 PKP1Q13835 747 aa21.18■□□□□ 0.98
SYNE4-202ENST00000340477 DHX8Q14562 1220 aaKnown RBP21.18■□□□□ 0.98
SYNE4-202ENST00000340477 PTPROQ16827 1216 aa21.18■□□□□ 0.98
SYNE4-202ENST00000340477 RRAGBQ5VZM2 374 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms