RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 PRPHP41219 470 aa14.84□□□□□ -0.03
SIRPB3P-201ENST00000340424 UBE3AQ05086 875 aa14.84□□□□□ -0.03
SIRPB3P-201ENST00000340424 PDIA5Q14554 519 aa14.84□□□□□ -0.03
SIRPB3P-201ENST00000340424 FAM102BQ5T8I3 360 aa14.84□□□□□ -0.03
SIRPB3P-201ENST00000340424 TWF2Q6IBS0 349 aaKnown RBP14.84□□□□□ -0.03
SIRPB3P-201ENST00000340424 ZNF598Q86UK7 904 aaKnown RBP14.84□□□□□ -0.03
SIRPB3P-201ENST00000340424 CATSPER3Q86XQ3 398 aa14.84□□□□□ -0.03
SIRPB3P-201ENST00000340424 KSR1Q8IVT5 923 aa14.84□□□□□ -0.03
SIRPB3P-201ENST00000340424 MCPH1Q8NEM0 835 aa14.84□□□□□ -0.03
SIRPB3P-201ENST00000340424 PPP2R3CQ969Q6 453 aa14.84□□□□□ -0.03
SIRPB3P-201ENST00000340424 MRPL9Q9BYD2 267 aaKnown RBP14.84□□□□□ -0.03
SIRPB3P-201ENST00000340424 NFKBIZQ9BYH8 718 aa14.84□□□□□ -0.03
SIRPB3P-201ENST00000340424 BACH2Q9BYV9 841 aa14.84□□□□□ -0.03
SIRPB3P-201ENST00000340424 AGPAT5Q9NUQ2 364 aa14.84□□□□□ -0.03
SIRPB3P-201ENST00000340424 PLAGL2Q9UPG8 496 aa14.84□□□□□ -0.03
SIRPB3P-201ENST00000340424 PIN4Q9Y237 131 aaKnown RBP14.84□□□□□ -0.03
SIRPB3P-201ENST00000340424 KIAA1671Q9BY89 1806 aa14.83□□□□□ -0.04
SIRPB3P-201ENST00000340424 ZBTB39O15060 712 aa14.83□□□□□ -0.04
SIRPB3P-201ENST00000340424 SRGAP2CP0DJJ0 459 aa14.83□□□□□ -0.04
SIRPB3P-201ENST00000340424 IBSPP21815 317 aaPredicted RBP14.83□□□□□ -0.04
SIRPB3P-201ENST00000340424 FGFR4P22455 802 aa14.83□□□□□ -0.04
SIRPB3P-201ENST00000340424 NCBP1Q09161 790 aaKnown RBP14.83□□□□□ -0.04
SIRPB3P-201ENST00000340424 SPOUT1Q5T280 376 aaKnown RBP14.83□□□□□ -0.04
SIRPB3P-201ENST00000340424 C4orf32Q8N8J7 132 aa14.83□□□□□ -0.04
SIRPB3P-201ENST00000340424 RNF149Q8NC42 400 aa14.83□□□□□ -0.04
SIRPB3P-201ENST00000340424 CCDC51Q96ER9 411 aa14.83□□□□□ -0.04
SIRPB3P-201ENST00000340424 XPNPEP1Q9NQW7 623 aa14.83□□□□□ -0.04
SIRPB3P-201ENST00000340424 DAXXQ9UER7 740 aaPredicted RBP14.83□□□□□ -0.04
SIRPB3P-201ENST00000340424 LRWD1Q9UFC0 647 aa14.83□□□□□ -0.04
SIRPB3P-201ENST00000340424 GRM6O15303 877 aa14.82□□□□□ -0.04
SIRPB3P-201ENST00000340424 ZNF623O75123 536 aa14.82□□□□□ -0.04
SIRPB3P-201ENST00000340424 MED24O75448 989 aa14.82□□□□□ -0.04
SIRPB3P-201ENST00000340424 CSDE1O75534 798 aaKnown RBP14.82□□□□□ -0.04
SIRPB3P-201ENST00000340424 ERLIN2O94905 339 aa14.82□□□□□ -0.04
SIRPB3P-201ENST00000340424 FGFR1P11362 822 aa14.82□□□□□ -0.04
SIRPB3P-201ENST00000340424 AXLP30530 894 aa14.82□□□□□ -0.04
SIRPB3P-201ENST00000340424 PPM1AP35813 382 aa14.82□□□□□ -0.04
SIRPB3P-201ENST00000340424 ARL2P36404 184 aa14.82□□□□□ -0.04
SIRPB3P-201ENST00000340424 GATMP50440 423 aa14.82□□□□□ -0.04
SIRPB3P-201ENST00000340424 TOB1P50616 345 aaPredicted RBP14.82□□□□□ -0.04
SIRPB3P-201ENST00000340424 PTENP60484 403 aa14.82□□□□□ -0.04
SIRPB3P-201ENST00000340424 PTGDRQ13258 359 aa14.82□□□□□ -0.04
SIRPB3P-201ENST00000340424 COL19A1Q14993 1142 aa14.82□□□□□ -0.04
SIRPB3P-201ENST00000340424 MCTP1Q6DN14 999 aa14.82□□□□□ -0.04
SIRPB3P-201ENST00000340424 IGSF22Q8N9C0 903 aa14.82□□□□□ -0.04
SIRPB3P-201ENST00000340424 KLHL23Q8NBE8 558 aa14.82□□□□□ -0.04
SIRPB3P-201ENST00000340424 PIGOQ8TEQ8 1089 aa14.82□□□□□ -0.04
SIRPB3P-201ENST00000340424 PGBD4Q96DM1 585 aa14.82□□□□□ -0.04
SIRPB3P-201ENST00000340424 CASD1Q96PB1 797 aa14.82□□□□□ -0.04
SIRPB3P-201ENST00000340424 UBE2ZQ9H832 354 aaPredicted RBP14.82□□□□□ -0.04
SIRPB3P-201ENST00000340424 FAM105AQ9NUU6 356 aa14.82□□□□□ -0.04
SIRPB3P-201ENST00000340424 TYW1Q9NV66 732 aaKnown RBP14.82□□□□□ -0.04
SIRPB3P-201ENST00000340424 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.81□□□□□ -0.04
SIRPB3P-201ENST00000340424 FSD2A1L4K1 749 aa14.81□□□□□ -0.04
SIRPB3P-201ENST00000340424 ITGB1P05556 798 aa14.81□□□□□ -0.04
SIRPB3P-201ENST00000340424 PDCP20941 246 aa14.81□□□□□ -0.04
SIRPB3P-201ENST00000340424 CUL4AQ13619 759 aa14.81□□□□□ -0.04
SIRPB3P-201ENST00000340424 PUS10Q3MIT2 529 aaKnown RBP14.81□□□□□ -0.04
SIRPB3P-201ENST00000340424 TCEAL5Q5H9L2 206 aa14.81□□□□□ -0.04
SIRPB3P-201ENST00000340424 PDE12Q6L8Q7 609 aaKnown RBP14.81□□□□□ -0.04
SIRPB3P-201ENST00000340424 DTHD1Q6ZMT9 781 aa14.81□□□□□ -0.04
SIRPB3P-201ENST00000340424 KCTD17Q8N5Z5 321 aa14.81□□□□□ -0.04
SIRPB3P-201ENST00000340424 RNF169Q8NCN4 708 aa14.81□□□□□ -0.04
SIRPB3P-201ENST00000340424 CNNM3Q8NE01 707 aa14.81□□□□□ -0.04
SIRPB3P-201ENST00000340424 SPPL3Q8TCT6 385 aa14.81□□□□□ -0.04
SIRPB3P-201ENST00000340424 PABPC5Q96DU9 382 aaKnown RBP14.81□□□□□ -0.04
SIRPB3P-201ENST00000340424 CWH43Q9H720 699 aa14.81□□□□□ -0.04
SIRPB3P-201ENST00000340424 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.81□□□□□ -0.04
SIRPB3P-201ENST00000340424 BMP2KQ9NSY1 1161 aaPredicted RBP14.81□□□□□ -0.04
SIRPB3P-201ENST00000340424 RNF19AQ9NV58 838 aa14.81□□□□□ -0.04
SIRPB3P-201ENST00000340424 LZTS1Q9Y250 596 aa14.81□□□□□ -0.04
SIRPB3P-201ENST00000340424 PCDHB6Q9Y5E3 794 aa14.81□□□□□ -0.04
SIRPB3P-201ENST00000340424 ARHGEF35A5YM69 484 aa14.8□□□□□ -0.04
SIRPB3P-201ENST00000340424 USO1O60763 962 aaKnown RBP14.8□□□□□ -0.04
SIRPB3P-201ENST00000340424 BMP1P13497 986 aa14.8□□□□□ -0.04
SIRPB3P-201ENST00000340424 ATF7P17544 494 aaPredicted RBP14.8□□□□□ -0.04
SIRPB3P-201ENST00000340424 CCT6AP40227 531 aaKnown RBP14.8□□□□□ -0.04
SIRPB3P-201ENST00000340424 PLCB3Q01970 1234 aa14.8□□□□□ -0.04
SIRPB3P-201ENST00000340424 TFF2Q03403 129 aa14.8□□□□□ -0.04
SIRPB3P-201ENST00000340424 CAPSQ13938 189 aa14.8□□□□□ -0.04
SIRPB3P-201ENST00000340424 NBR1Q14596 966 aa14.8□□□□□ -0.04
SIRPB3P-201ENST00000340424 CLLU1OSQ5K130 101 aa14.8□□□□□ -0.04
SIRPB3P-201ENST00000340424 KRT79Q5XKE5 535 aa14.8□□□□□ -0.04
SIRPB3P-201ENST00000340424 LARP1BQ659C4 914 aaKnown RBP14.8□□□□□ -0.04
SIRPB3P-201ENST00000340424 NOTUMQ6P988 496 aa14.8□□□□□ -0.04
SIRPB3P-201ENST00000340424 POTEGQ6S5H5 508 aa14.8□□□□□ -0.04
SIRPB3P-201ENST00000340424 GLB1LQ6UWU2 654 aa14.8□□□□□ -0.04
SIRPB3P-201ENST00000340424 THNSL1Q8IYQ7 743 aa14.8□□□□□ -0.04
SIRPB3P-201ENST00000340424 COLGALT1Q8NBJ5 622 aa14.8□□□□□ -0.04
SIRPB3P-201ENST00000340424 ZNF558Q96NG5 402 aa14.8□□□□□ -0.04
SIRPB3P-201ENST00000340424 MINDY3Q9H8M7 445 aa14.8□□□□□ -0.04
SIRPB3P-201ENST00000340424 ALG13Q9NP73 1137 aaKnown RBP14.8□□□□□ -0.04
SIRPB3P-201ENST00000340424 UBN1Q9NPG3 1134 aa14.8□□□□□ -0.04
SIRPB3P-201ENST00000340424 CNTNAP2Q9UHC6 1331 aa14.8□□□□□ -0.04
SIRPB3P-201ENST00000340424 INO80B-WBP1J3KQ70 363 aa14.79□□□□□ -0.04
SIRPB3P-201ENST00000340424 FGF18O76093 207 aa14.79□□□□□ -0.04
SIRPB3P-201ENST00000340424 BMP15O95972 392 aa14.79□□□□□ -0.04
SIRPB3P-201ENST00000340424 GLRA2P23416 452 aa14.79□□□□□ -0.04
SIRPB3P-201ENST00000340424 HOXA11P31270 313 aaPredicted RBP14.79□□□□□ -0.04
SIRPB3P-201ENST00000340424 ATP2C1P98194 919 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms