RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 PNMA2Q9UL42 364 aa16.84■□□□□ 0.29
MBD1-203ENST00000339998 SYNGAP1Q96PV0 1343 aa16.84■□□□□ 0.29
MBD1-203ENST00000339998 MTERF4Q7Z6M4 381 aaKnown RBP16.83■□□□□ 0.29
MBD1-203ENST00000339998 RIOX2Q8IUF8 465 aa16.83■□□□□ 0.29
MBD1-203ENST00000339998 CHST13Q8NET6 341 aa16.83■□□□□ 0.29
MBD1-203ENST00000339998 GPR88Q9GZN0 384 aa16.83■□□□□ 0.29
MBD1-203ENST00000339998 POLR3FQ9H1D9 316 aaPredicted RBP16.83■□□□□ 0.29
MBD1-203ENST00000339998 CTAGE15A4D2H0 777 aa16.83■□□□□ 0.28
MBD1-203ENST00000339998 EIF3JO75822 258 aaKnown RBP16.83■□□□□ 0.28
MBD1-203ENST00000339998 SUPT20HL2P0C7V6 817 aa16.83■□□□□ 0.28
MBD1-203ENST00000339998 CTAGE8P0CG41 777 aa16.83■□□□□ 0.28
MBD1-203ENST00000339998 VAMP7P51809 220 aa16.83■□□□□ 0.28
MBD1-203ENST00000339998 JAM2P57087 298 aa16.83■□□□□ 0.28
MBD1-203ENST00000339998 RNASE9P60153 205 aaKnown RBP16.83■□□□□ 0.28
MBD1-203ENST00000339998 MAP2K1Q02750 393 aaPredicted RBP16.83■□□□□ 0.28
MBD1-203ENST00000339998 PPATQ06203 517 aa16.83■□□□□ 0.28
MBD1-203ENST00000339998 PAPD7Q5XG87 772 aaKnown RBP16.83■□□□□ 0.28
MBD1-203ENST00000339998 XRRA1Q6P2D8 792 aa16.83■□□□□ 0.28
MBD1-203ENST00000339998 TAS1R3Q7RTX0 852 aa16.83■□□□□ 0.28
MBD1-203ENST00000339998 CTAGE6Q86UF2 777 aa16.83■□□□□ 0.28
MBD1-203ENST00000339998 CTAGE4Q8IX94 777 aa16.83■□□□□ 0.28
MBD1-203ENST00000339998 XXYLT1Q8NBI6 393 aa16.83■□□□□ 0.28
MBD1-203ENST00000339998 SYN2Q92777 582 aaPredicted RBP16.83■□□□□ 0.28
MBD1-203ENST00000339998 COPS5Q92905 334 aa16.83■□□□□ 0.28
MBD1-203ENST00000339998 PCYT2Q99447 389 aa16.83■□□□□ 0.28
MBD1-203ENST00000339998 MAFGO15525 162 aa16.83■□□□□ 0.28
MBD1-203ENST00000339998 CALCAP01258 141 aa16.83■□□□□ 0.28
MBD1-203ENST00000339998 MATR3P43243 847 aaKnown RBP eCLIP16.83■□□□□ 0.28
MBD1-203ENST00000339998 MOGSQ13724 837 aa16.83■□□□□ 0.28
MBD1-203ENST00000339998 OTUD6AQ7L8S5 288 aa16.83■□□□□ 0.28
MBD1-203ENST00000339998 SMAP1Q8IYB5 467 aaPredicted RBP16.83■□□□□ 0.28
MBD1-203ENST00000339998 LMO3Q8TAP4 145 aa16.83■□□□□ 0.28
MBD1-203ENST00000339998 MS4A14Q96JA4 679 aa16.83■□□□□ 0.28
MBD1-203ENST00000339998 MKNK1Q9BUB5 465 aa16.83■□□□□ 0.28
MBD1-203ENST00000339998 PLEKHA4Q9H4M7 779 aa16.83■□□□□ 0.28
MBD1-203ENST00000339998 TMEM206Q9H813 350 aa16.83■□□□□ 0.28
MBD1-203ENST00000339998 CLEC11AQ9Y240 323 aa16.83■□□□□ 0.28
MBD1-203ENST00000339998 UBE4BO95155 1302 aa16.82■□□□□ 0.28
MBD1-203ENST00000339998 LOXHD1Q8IVV2 1947 aa16.82■□□□□ 0.28
MBD1-203ENST00000339998 SPDYE5A6NIY4 337 aa16.82■□□□□ 0.28
MBD1-203ENST00000339998 FOXN3O00409 490 aaPredicted RBP16.82■□□□□ 0.28
MBD1-203ENST00000339998 TACC1O75410 805 aa16.82■□□□□ 0.28
MBD1-203ENST00000339998 PALMO75781 387 aa16.82■□□□□ 0.28
MBD1-203ENST00000339998 GJC2Q5T442 439 aaPredicted RBP16.82■□□□□ 0.28
MBD1-203ENST00000339998 ZNF662Q6ZS27 426 aa16.82■□□□□ 0.28
MBD1-203ENST00000339998 GLYCTKQ8IVS8 523 aa16.82■□□□□ 0.28
MBD1-203ENST00000339998 CEP112Q8N8E3 955 aa16.82■□□□□ 0.28
MBD1-203ENST00000339998 SENP7Q9BQF6 1050 aa16.82■□□□□ 0.28
MBD1-203ENST00000339998 PORCNQ9H237 461 aa16.82■□□□□ 0.28
MBD1-203ENST00000339998 ZNF302Q9NR11 478 aa16.82■□□□□ 0.28
MBD1-203ENST00000339998 CHORDC1Q9UHD1 332 aaPredicted RBP16.82■□□□□ 0.28
MBD1-203ENST00000339998 GSTTP1A0A1W2PQM5 241 aa16.82■□□□□ 0.28
MBD1-203ENST00000339998 KRT13P13646 458 aa16.82■□□□□ 0.28
MBD1-203ENST00000339998 C2orf54Q08AI8 447 aa16.82■□□□□ 0.28
MBD1-203ENST00000339998 SEZ6Q53EL9 994 aa16.82■□□□□ 0.28
MBD1-203ENST00000339998 ZBTB45Q96K62 511 aaPredicted RBP16.82■□□□□ 0.28
MBD1-203ENST00000339998 EFCC1Q9HA90 598 aa16.82■□□□□ 0.28
MBD1-203ENST00000339998 UBE2TQ9NPD8 197 aaPredicted RBP16.82■□□□□ 0.28
MBD1-203ENST00000339998 PRDM10Q9NQV6 1147 aa16.82■□□□□ 0.28
MBD1-203ENST00000339998 MYPNQ86TC9 1320 aa16.81■□□□□ 0.28
MBD1-203ENST00000339998 F8VZ95 297 aa16.81■□□□□ 0.28
MBD1-203ENST00000339998 DDX3XO00571 662 aaKnown RBP eCLIP16.81■□□□□ 0.282e-8■■■■□ 25.7
MBD1-203ENST00000339998 GGPS1O95749 300 aa16.81■□□□□ 0.28
MBD1-203ENST00000339998 DLATP10515 647 aaKnown RBP16.81■□□□□ 0.28
MBD1-203ENST00000339998 SMTNP53814 917 aa16.81■□□□□ 0.28
MBD1-203ENST00000339998 WNT7BP56706 349 aa16.81■□□□□ 0.28
MBD1-203ENST00000339998 GPR162Q16538 588 aa16.81■□□□□ 0.28
MBD1-203ENST00000339998 SNRNP35Q16560 246 aaKnown RBP16.81■□□□□ 0.28
MBD1-203ENST00000339998 NFIL3Q16649 462 aa16.81■□□□□ 0.28
MBD1-203ENST00000339998 HSDL1Q3SXM5 330 aa16.81■□□□□ 0.28
MBD1-203ENST00000339998 MIS18BP1Q6P0N0 1132 aa16.81■□□□□ 0.28
MBD1-203ENST00000339998 FBXO16Q8IX29 292 aaPredicted RBP16.81■□□□□ 0.28
MBD1-203ENST00000339998 GPR161Q8N6U8 529 aaKnown RBP16.81■□□□□ 0.28
MBD1-203ENST00000339998 ASAP3Q8TDY4 903 aa16.81■□□□□ 0.28
MBD1-203ENST00000339998 U2AF1L4Q8WU68 220 aaKnown RBP16.81■□□□□ 0.28
MBD1-203ENST00000339998 RABGGTAQ92696 567 aa16.81■□□□□ 0.28
MBD1-203ENST00000339998 FGD4Q96M96 766 aa16.81■□□□□ 0.28
MBD1-203ENST00000339998 NUCKS1Q9H1E3 243 aaKnown RBP16.81■□□□□ 0.28
MBD1-203ENST00000339998 PDLIM7Q9NR12 457 aa16.81■□□□□ 0.28
MBD1-203ENST00000339998 SEPT11Q9NVA2 429 aaKnown RBP16.81■□□□□ 0.28
MBD1-203ENST00000339998 NAGPAQ9UK23 515 aa16.81■□□□□ 0.28
MBD1-203ENST00000339998 HNRNPDLO14979 420 aaKnown RBP16.81■□□□□ 0.28
MBD1-203ENST00000339998 FARP2O94887 1054 aaPredicted RBP16.81■□□□□ 0.28
MBD1-203ENST00000339998 USP8P40818 1118 aa16.81■□□□□ 0.28
MBD1-203ENST00000339998 POLGP54098 1239 aaPredicted RBP16.81■□□□□ 0.28
MBD1-203ENST00000339998 ALKBH5Q6P6C2 394 aaKnown RBP16.81■□□□□ 0.28
MBD1-203ENST00000339998 SLC9A9Q8IVB4 645 aa16.81■□□□□ 0.28
MBD1-203ENST00000339998 LNX1Q8TBB1 728 aaPredicted RBP16.81■□□□□ 0.28
MBD1-203ENST00000339998 CAGE1Q8TC20 777 aa16.81■□□□□ 0.28
MBD1-203ENST00000339998 POMGNT1Q8WZA1 660 aa16.81■□□□□ 0.28
MBD1-203ENST00000339998 SEMA4DQ92854 862 aa16.81■□□□□ 0.28
MBD1-203ENST00000339998 TLR10Q9BXR5 811 aa16.81■□□□□ 0.28
MBD1-203ENST00000339998 TSGA10Q9BZW7 698 aa16.81■□□□□ 0.28
MBD1-203ENST00000339998 TMEM117Q9H0C3 514 aa16.81■□□□□ 0.28
MBD1-203ENST00000339998 PDGFCQ9NRA1 345 aa16.81■□□□□ 0.28
MBD1-203ENST00000339998 TAS2R14Q9NYV8 317 aa16.81■□□□□ 0.28
MBD1-203ENST00000339998 PJA2O43164 708 aa16.8■□□□□ 0.28
MBD1-203ENST00000339998 SASH3O75995 380 aa16.8■□□□□ 0.28
MBD1-203ENST00000339998 EDN1P05305 212 aa16.8■□□□□ 0.28
MBD1-203ENST00000339998 MAPTP10636 758 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms