RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 DDX23Q9BUQ8 820 aaKnown RBP21.94■■□□□ 1.1
RUNX3-202ENST00000338888 THAP2Q9H0W7 228 aa21.94■■□□□ 1.1
RUNX3-202ENST00000338888 ZNF652Q9Y2D9 606 aa21.94■■□□□ 1.1
RUNX3-202ENST00000338888 TAF1P21675 1872 aa21.94■■□□□ 1.1
RUNX3-202ENST00000338888 ATP8B3O60423 1300 aa21.94■■□□□ 1.1
RUNX3-202ENST00000338888 O00370 1275 aa21.94■■□□□ 1.1
RUNX3-202ENST00000338888 CTCFP49711 727 aaPredicted RBP21.94■■□□□ 1.1
RUNX3-202ENST00000338888 MGAT5Q09328 741 aa21.94■■□□□ 1.1
RUNX3-202ENST00000338888 MAPKAPK5Q8IW41 473 aa21.94■■□□□ 1.1
RUNX3-202ENST00000338888 MOV10L1Q9BXT6 1211 aaKnown RBP21.94■■□□□ 1.1
RUNX3-202ENST00000338888 TRIM7Q9C029 511 aa21.94■■□□□ 1.1
RUNX3-202ENST00000338888 TAS2R14Q9NYV8 317 aa21.94■■□□□ 1.1
RUNX3-202ENST00000338888 PRKAG3Q9UGI9 489 aa21.94■■□□□ 1.1
RUNX3-202ENST00000338888 ZMYND8Q9ULU4 1186 aaPredicted RBP21.94■■□□□ 1.1
RUNX3-202ENST00000338888 COG5Q9UP83 839 aa21.94■■□□□ 1.1
RUNX3-202ENST00000338888 NCANO14594 1321 aa21.94■■□□□ 1.1
RUNX3-202ENST00000338888 DPPA5A6NC42 116 aa21.93■■□□□ 1.1
RUNX3-202ENST00000338888 ACSL3O95573 720 aa21.93■■□□□ 1.1
RUNX3-202ENST00000338888 MYBL1P10243 752 aa21.93■■□□□ 1.1
RUNX3-202ENST00000338888 CHRNA3P32297 505 aa21.93■■□□□ 1.1
RUNX3-202ENST00000338888 KNOP1Q1ED39 458 aaKnown RBP21.93■■□□□ 1.1
RUNX3-202ENST00000338888 ERFEQ4G0M1 354 aa21.93■■□□□ 1.1
RUNX3-202ENST00000338888 SPTY2D1Q68D10 685 aaPredicted RBP21.93■■□□□ 1.1
RUNX3-202ENST00000338888 MFSD5Q6N075 450 aa21.93■■□□□ 1.1
RUNX3-202ENST00000338888 CCDC137Q6PK04 289 aaKnown RBP21.93■■□□□ 1.1
RUNX3-202ENST00000338888 UTP4Q969X6 686 aaKnown RBP21.93■■□□□ 1.1
RUNX3-202ENST00000338888 CRAMP1Q96RY5 1269 aa21.93■■□□□ 1.1
RUNX3-202ENST00000338888 CCNL1Q9UK58 526 aaPredicted RBP21.93■■□□□ 1.1
RUNX3-202ENST00000338888 TRAF3IP3Q9Y228 551 aa21.93■■□□□ 1.1
RUNX3-202ENST00000338888 PFASO15067 1338 aa21.93■■□□□ 1.1
RUNX3-202ENST00000338888 EP400Q96L91 3159 aa21.93■■□□□ 1.1
RUNX3-202ENST00000338888 GNPATO15228 680 aa21.93■■□□□ 1.1
RUNX3-202ENST00000338888 SNUPNO95149 360 aaKnown RBP21.93■■□□□ 1.1
RUNX3-202ENST00000338888 HOXD13P35453 343 aa21.93■■□□□ 1.1
RUNX3-202ENST00000338888 DIXDC1Q155Q3 683 aa21.93■■□□□ 1.1
RUNX3-202ENST00000338888 KRT35Q92764 455 aa21.93■■□□□ 1.1
RUNX3-202ENST00000338888 SLC35C1Q96A29 364 aa21.93■■□□□ 1.1
RUNX3-202ENST00000338888 CTNNAL1Q9UBT7 734 aa21.93■■□□□ 1.1
RUNX3-202ENST00000338888 PARP2Q9UGN5 583 aa21.93■■□□□ 1.1
RUNX3-202ENST00000338888 SRP68Q9UHB9 627 aaKnown RBP21.93■■□□□ 1.1
RUNX3-202ENST00000338888 PCDHA3Q9Y5H8 950 aa21.93■■□□□ 1.1
RUNX3-202ENST00000338888 PODXLO00592 558 aa21.93■■□□□ 1.1
RUNX3-202ENST00000338888 LMNB1P20700 586 aa21.93■■□□□ 1.1
RUNX3-202ENST00000338888 MARCKSL1P49006 195 aa21.93■■□□□ 1.1
RUNX3-202ENST00000338888 RBBP5Q15291 538 aaKnown RBP21.93■■□□□ 1.1
RUNX3-202ENST00000338888 ANKLE1Q8NAG6 615 aa21.93■■□□□ 1.1
RUNX3-202ENST00000338888 CKAP2Q8WWK9 683 aa21.93■■□□□ 1.1
RUNX3-202ENST00000338888 PCDHB13Q9Y5F0 798 aa21.93■■□□□ 1.1
RUNX3-202ENST00000338888 ALG6Q9Y672 507 aa21.93■■□□□ 1.1
RUNX3-202ENST00000338888 KDM3AQ9Y4C1 1321 aa21.92■■□□□ 1.1
RUNX3-202ENST00000338888 TMEM110-MUSTN1A8MSY1 372 aa21.92■■□□□ 1.1
RUNX3-202ENST00000338888 CLIC2O15247 247 aa21.92■■□□□ 1.1
RUNX3-202ENST00000338888 RNASELQ05823 741 aaKnown RBP21.92■■□□□ 1.1
RUNX3-202ENST00000338888 MPP2Q14168 576 aa21.92■■□□□ 1.1
RUNX3-202ENST00000338888 GNPTABQ3T906 1256 aa21.92■■□□□ 1.1
RUNX3-202ENST00000338888 CGB2Q6NT52 195 aa21.92■■□□□ 1.1
RUNX3-202ENST00000338888 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.92■■□□□ 1.1
RUNX3-202ENST00000338888 ETAA1Q9NY74 926 aa21.92■■□□□ 1.1
RUNX3-202ENST00000338888 KLHL14Q9P2G3 628 aa21.92■■□□□ 1.1
RUNX3-202ENST00000338888 ANKRD33BA6NCL7 494 aa21.92■■□□□ 1.1
RUNX3-202ENST00000338888 CCNB1P14635 433 aa21.92■■□□□ 1.1
RUNX3-202ENST00000338888 PECAM1P16284 738 aaPredicted RBP21.92■■□□□ 1.1
RUNX3-202ENST00000338888 SOX5P35711 763 aa21.92■■□□□ 1.1
RUNX3-202ENST00000338888 HYIQ5T013 277 aa21.92■■□□□ 1.1
RUNX3-202ENST00000338888 ANO7Q6IWH7 933 aa21.92■■□□□ 1.1
RUNX3-202ENST00000338888 TXNRD3Q86VQ6 643 aa21.92■■□□□ 1.1
RUNX3-202ENST00000338888 PALB2Q86YC2 1186 aa21.92■■□□□ 1.1
RUNX3-202ENST00000338888 CEP95Q96GE4 821 aa21.92■■□□□ 1.1
RUNX3-202ENST00000338888 TGS1Q96RS0 853 aaKnown RBP21.92■■□□□ 1.1
RUNX3-202ENST00000338888 ROPN1BQ9BZX4 212 aaPredicted RBP21.92■■□□□ 1.1
RUNX3-202ENST00000338888 ROPN1Q9HAT0 212 aaPredicted RBP21.92■■□□□ 1.1
RUNX3-202ENST00000338888 UNC5CO95185 931 aa21.91■■□□□ 1.1
RUNX3-202ENST00000338888 KCNJ1P48048 391 aa21.91■■□□□ 1.1
RUNX3-202ENST00000338888 RWDD2BP57060 319 aa21.91■■□□□ 1.1
RUNX3-202ENST00000338888 ADCY1Q08828 1119 aa21.91■■□□□ 1.1
RUNX3-202ENST00000338888 SNX1Q13596 522 aa21.91■■□□□ 1.1
RUNX3-202ENST00000338888 ECHDC2Q86YB7 292 aa21.91■■□□□ 1.1
RUNX3-202ENST00000338888 CCDC105Q8IYK2 499 aa21.91■■□□□ 1.1
RUNX3-202ENST00000338888 TEX9Q8N6V9 391 aa21.91■■□□□ 1.1
RUNX3-202ENST00000338888 PLCD4Q9BRC7 762 aa21.91■■□□□ 1.1
RUNX3-202ENST00000338888 RIOX1Q9H6W3 641 aa21.91■■□□□ 1.1
RUNX3-202ENST00000338888 PCYOX1Q9UHG3 505 aa21.91■■□□□ 1.1
RUNX3-202ENST00000338888 SCN7AQ01118 1682 aa21.91■■□□□ 1.1
RUNX3-202ENST00000338888 PDHA1P08559 390 aa21.91■■□□□ 1.1
RUNX3-202ENST00000338888 GNAZP19086 355 aa21.91■■□□□ 1.1
RUNX3-202ENST00000338888 GBP1P32455 592 aa21.91■■□□□ 1.1
RUNX3-202ENST00000338888 PCK1P35558 622 aa21.91■■□□□ 1.1
RUNX3-202ENST00000338888 DRAP1Q14919 205 aaPredicted RBP21.91■■□□□ 1.1
RUNX3-202ENST00000338888 SFR1Q86XK3 245 aa21.91■■□□□ 1.1
RUNX3-202ENST00000338888 CCDC24Q8N4L8 307 aa21.91■■□□□ 1.1
RUNX3-202ENST00000338888 CDC42EP4Q9H3Q1 356 aaKnown RBP21.91■■□□□ 1.1
RUNX3-202ENST00000338888 ROBO3Q96MS0 1386 aa21.9■■□□□ 1.1
RUNX3-202ENST00000338888 POTEFA5A3E0 1075 aa21.9■■□□□ 1.1
RUNX3-202ENST00000338888 CALUO43852 315 aaPredicted RBP21.9■■□□□ 1.1
RUNX3-202ENST00000338888 NR3C1P04150 777 aa21.9■■□□□ 1.1
RUNX3-202ENST00000338888 FESP07332 822 aa21.9■■□□□ 1.1
RUNX3-202ENST00000338888 POTEIP0CG38 1075 aa21.9■■□□□ 1.1
RUNX3-202ENST00000338888 NEFHP12036 1026 aa21.9■■□□□ 1.1
RUNX3-202ENST00000338888 STAT3P40763 770 aa21.9■■□□□ 1.1
RUNX3-202ENST00000338888 CDK8P49336 464 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms