RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 MUC6Q6W4X9 2439 aa16.96■□□□□ 0.31
PRKN-201ENST00000338468 PDCP20941 246 aa16.96■□□□□ 0.31
PRKN-201ENST00000338468 HOXA11P31270 313 aaPredicted RBP16.96■□□□□ 0.31
PRKN-201ENST00000338468 CTNNB1P35222 781 aa16.96■□□□□ 0.31
PRKN-201ENST00000338468 PTENP60484 403 aa16.96■□□□□ 0.31
PRKN-201ENST00000338468 RESTQ13127 1097 aa16.96■□□□□ 0.31
PRKN-201ENST00000338468 MXD4Q14582 209 aaPredicted RBP16.96■□□□□ 0.31
PRKN-201ENST00000338468 MAEAQ7L5Y9 396 aa16.96■□□□□ 0.31
PRKN-201ENST00000338468 CATSPER4Q7RTX7 472 aa16.96■□□□□ 0.31
PRKN-201ENST00000338468 IFNLR1Q8IU57 520 aaPredicted RBP16.96■□□□□ 0.31
PRKN-201ENST00000338468 AGPAT5Q9NUQ2 364 aa16.96■□□□□ 0.31
PRKN-201ENST00000338468 PIN4Q9Y237 131 aaKnown RBP16.96■□□□□ 0.31
PRKN-201ENST00000338468 ARHGEF35A5YM69 484 aa16.95■□□□□ 0.3
PRKN-201ENST00000338468 TBKBP1A7MCY6 615 aa16.95■□□□□ 0.3
PRKN-201ENST00000338468 PI4K2BG5E9Z4 385 aa16.95■□□□□ 0.3
PRKN-201ENST00000338468 CYP11B2P19099 503 aa16.95■□□□□ 0.3
PRKN-201ENST00000338468 POU5F1BQ06416 359 aa16.95■□□□□ 0.3
PRKN-201ENST00000338468 GPM6BQ13491 265 aa16.95■□□□□ 0.3
PRKN-201ENST00000338468 CLLU1OSQ5K130 101 aa16.95■□□□□ 0.3
PRKN-201ENST00000338468 ARL6IP4Q66PJ3 421 aaKnown RBP16.95■□□□□ 0.3
PRKN-201ENST00000338468 PADI6Q6TGC4 694 aa16.95■□□□□ 0.3
PRKN-201ENST00000338468 KCNK18Q7Z418 384 aa16.95■□□□□ 0.3
PRKN-201ENST00000338468 BSNDQ8WZ55 320 aa16.95■□□□□ 0.3
PRKN-201ENST00000338468 CCDC43Q96MW1 224 aaKnown RBP16.95■□□□□ 0.3
PRKN-201ENST00000338468 CASD1Q96PB1 797 aa16.95■□□□□ 0.3
PRKN-201ENST00000338468 RAB34Q9BZG1 259 aa16.95■□□□□ 0.3
PRKN-201ENST00000338468 BHMT2Q9H2M3 363 aa16.95■□□□□ 0.3
PRKN-201ENST00000338468 UBE2ZQ9H832 354 aaPredicted RBP16.95■□□□□ 0.3
PRKN-201ENST00000338468 DDX19AQ9NUU7 478 aaKnown RBP16.95■□□□□ 0.3
PRKN-201ENST00000338468 DACT1Q9NYF0 836 aa16.95■□□□□ 0.3
PRKN-201ENST00000338468 MTMR6Q9Y217 621 aa16.95■□□□□ 0.3
PRKN-201ENST00000338468 VWA3AA6NCI4 1184 aa16.94■□□□□ 0.3
PRKN-201ENST00000338468 E9PMD0 336 aa16.94■□□□□ 0.3
PRKN-201ENST00000338468 GRM6O15303 877 aa16.94■□□□□ 0.3
PRKN-201ENST00000338468 RB1P06400 928 aa16.94■□□□□ 0.3
PRKN-201ENST00000338468 PHKA2P46019 1235 aa16.94■□□□□ 0.3
PRKN-201ENST00000338468 GRIN1Q05586 938 aa16.94■□□□□ 0.3
PRKN-201ENST00000338468 MBTD1Q05BQ5 628 aa16.94■□□□□ 0.3
PRKN-201ENST00000338468 AMHR2Q16671 573 aa16.94■□□□□ 0.3
PRKN-201ENST00000338468 HYIQ5T013 277 aa16.94■□□□□ 0.3
PRKN-201ENST00000338468 UBXN11Q5T124 520 aa16.94■□□□□ 0.3
PRKN-201ENST00000338468 KRT79Q5XKE5 535 aa16.94■□□□□ 0.3
PRKN-201ENST00000338468 FAM173BQ6P4H8 233 aa16.94■□□□□ 0.3
PRKN-201ENST00000338468 LRRC55Q6ZSA7 311 aa16.94■□□□□ 0.3
PRKN-201ENST00000338468 MCPH1Q8NEM0 835 aa16.94■□□□□ 0.3
PRKN-201ENST00000338468 MRPL38Q96DV4 380 aaKnown RBP16.94■□□□□ 0.3
PRKN-201ENST00000338468 PNMA5Q96PV4 448 aa16.94■□□□□ 0.3
PRKN-201ENST00000338468 NFKBIZQ9BYH8 718 aa16.94■□□□□ 0.3
PRKN-201ENST00000338468 TMEM117Q9H0C3 514 aa16.94■□□□□ 0.3
PRKN-201ENST00000338468 CWH43Q9H720 699 aa16.94■□□□□ 0.3
PRKN-201ENST00000338468 RNF216Q9NWF9 866 aaPredicted RBP16.94■□□□□ 0.3
PRKN-201ENST00000338468 RWDD3Q9Y3V2 267 aa16.94■□□□□ 0.3
PRKN-201ENST00000338468 STK24Q9Y6E0 443 aa16.94■□□□□ 0.3
PRKN-201ENST00000338468 ATG2AQ2TAZ0 1938 aa16.94■□□□□ 0.3
PRKN-201ENST00000338468 MEIS3P2A8K0S8 358 aa16.93■□□□□ 0.3
PRKN-201ENST00000338468 PRR33A8MZF0 331 aa16.93■□□□□ 0.3
PRKN-201ENST00000338468 TSPAN1O60635 241 aa16.93■□□□□ 0.3
PRKN-201ENST00000338468 ZNF623O75123 536 aa16.93■□□□□ 0.3
PRKN-201ENST00000338468 EOMESO95936 686 aa16.93■□□□□ 0.3
PRKN-201ENST00000338468 TFDP1Q14186 410 aa16.93■□□□□ 0.3
PRKN-201ENST00000338468 SF3A1Q15459 793 aaKnown RBP16.93■□□□□ 0.3
PRKN-201ENST00000338468 TWF2Q6IBS0 349 aaKnown RBP16.93■□□□□ 0.3
PRKN-201ENST00000338468 RNF169Q8NCN4 708 aa16.93■□□□□ 0.3
PRKN-201ENST00000338468 PLVAPQ9BX97 442 aa16.93■□□□□ 0.3
PRKN-201ENST00000338468 POLD4Q9HCU8 107 aa16.93■□□□□ 0.3
PRKN-201ENST00000338468 CD320Q9NPF0 282 aa16.93■□□□□ 0.3
PRKN-201ENST00000338468 FAM105AQ9NUU6 356 aa16.93■□□□□ 0.3
PRKN-201ENST00000338468 TYW1Q9NV66 732 aaKnown RBP16.93■□□□□ 0.3
PRKN-201ENST00000338468 EYA4O95677 639 aa16.92■□□□□ 0.3
PRKN-201ENST00000338468 KCNA5P22460 613 aa16.92■□□□□ 0.3
PRKN-201ENST00000338468 SSTR3P32745 418 aaPredicted RBP16.92■□□□□ 0.3
PRKN-201ENST00000338468 CAMK1Q14012 370 aa16.92■□□□□ 0.3
PRKN-201ENST00000338468 PTPAQ15257 358 aa16.92■□□□□ 0.3
PRKN-201ENST00000338468 LEXMQ3ZCV2 418 aa16.92■□□□□ 0.3
PRKN-201ENST00000338468 CDCA2Q69YH5 1023 aaPredicted RBP16.92■□□□□ 0.3
PRKN-201ENST00000338468 GJD3Q8N144 294 aa16.92■□□□□ 0.3
PRKN-201ENST00000338468 LPPQ93052 612 aa16.92■□□□□ 0.3
PRKN-201ENST00000338468 P2RX5Q93086 422 aa16.92■□□□□ 0.3
PRKN-201ENST00000338468 C11orf84Q9BUA3 381 aaPredicted RBP16.92■□□□□ 0.3
PRKN-201ENST00000338468 PLAGL2Q9UPG8 496 aa16.92■□□□□ 0.3
PRKN-201ENST00000338468 CLIC4Q9Y696 253 aa16.92■□□□□ 0.3
PRKN-201ENST00000338468 INO80B-WBP1J3KQ70 363 aa16.91■□□□□ 0.3
PRKN-201ENST00000338468 B4GALT5O43286 388 aa16.91■□□□□ 0.3
PRKN-201ENST00000338468 HOXA2O43364 376 aa16.91■□□□□ 0.3
PRKN-201ENST00000338468 STX6O43752 255 aa16.91■□□□□ 0.3
PRKN-201ENST00000338468 ITGB1P05556 798 aa16.91■□□□□ 0.3
PRKN-201ENST00000338468 DNAJB1P25685 340 aa16.91■□□□□ 0.3
PRKN-201ENST00000338468 PCBP1Q15365 356 aaKnown RBP eCLIP16.91■□□□□ 0.3
PRKN-201ENST00000338468 LONRF3Q496Y0 759 aa16.91■□□□□ 0.3
PRKN-201ENST00000338468 TMEM119Q4V9L6 283 aa16.91■□□□□ 0.3
PRKN-201ENST00000338468 AGMOQ6ZNB7 445 aa16.91■□□□□ 0.3
PRKN-201ENST00000338468 MRPL10Q7Z7H8 261 aaKnown RBP16.91■□□□□ 0.3
PRKN-201ENST00000338468 HSCBQ8IWL3 235 aa16.91■□□□□ 0.3
PRKN-201ENST00000338468 FAM178BQ8IXR5 827 aa16.91■□□□□ 0.3
PRKN-201ENST00000338468 DAW1Q8N136 415 aa16.91■□□□□ 0.3
PRKN-201ENST00000338468 KLHL23Q8NBE8 558 aa16.91■□□□□ 0.3
PRKN-201ENST00000338468 HELQQ8TDG4 1101 aa16.91■□□□□ 0.3
PRKN-201ENST00000338468 LRRC15Q8TF66 581 aa16.91■□□□□ 0.3
PRKN-201ENST00000338468 CPB2Q96IY4 423 aa16.91■□□□□ 0.3
PRKN-201ENST00000338468 RUSC1Q9BVN2 902 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms