RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 GJB1P08034 283 aa16.09■□□□□ 0.17
CBX3-201ENST00000337620 C6orf222P0C671 652 aaPredicted RBP16.09■□□□□ 0.17
CBX3-201ENST00000337620 ABCD1P33897 745 aa16.09■□□□□ 0.17
CBX3-201ENST00000337620 PSMC2P35998 433 aaKnown RBP16.09■□□□□ 0.17
CBX3-201ENST00000337620 ARMCX5Q6P1M9 558 aa16.09■□□□□ 0.17
CBX3-201ENST00000337620 TAS1R3Q7RTX0 852 aa16.09■□□□□ 0.17
CBX3-201ENST00000337620 TRIM59Q8IWR1 403 aa16.09■□□□□ 0.17
CBX3-201ENST00000337620 FAM186BQ8IYM0 893 aa16.09■□□□□ 0.17
CBX3-201ENST00000337620 RDH13Q8NBN7 331 aa16.09■□□□□ 0.17
CBX3-201ENST00000337620 RAET1EQ8TD07 263 aa16.09■□□□□ 0.17
CBX3-201ENST00000337620 PPP1R13LQ8WUF5 828 aa16.09■□□□□ 0.17
CBX3-201ENST00000337620 KAT2BQ92831 832 aa16.09■□□□□ 0.17
CBX3-201ENST00000337620 CBWD1Q9BRT8 395 aa16.09■□□□□ 0.17
CBX3-201ENST00000337620 COL1A2P08123 1366 aa16.09■□□□□ 0.17
CBX3-201ENST00000337620 ANKRD63C9JTQ0 380 aa16.09■□□□□ 0.17
CBX3-201ENST00000337620 HNRNPDLO14979 420 aaKnown RBP16.09■□□□□ 0.17
CBX3-201ENST00000337620 SEPT4O43236 478 aa16.09■□□□□ 0.17
CBX3-201ENST00000337620 FKTNO75072 461 aa16.09■□□□□ 0.17
CBX3-201ENST00000337620 F2P00734 622 aa16.09■□□□□ 0.17
CBX3-201ENST00000337620 PRKAR2AP13861 404 aaKnown RBP16.09■□□□□ 0.17
CBX3-201ENST00000337620 LRMPQ12912 555 aa16.09■□□□□ 0.17
CBX3-201ENST00000337620 TBX2Q13207 712 aaPredicted RBP16.09■□□□□ 0.17
CBX3-201ENST00000337620 PPFIBP1Q86W92 1011 aa16.09■□□□□ 0.17
CBX3-201ENST00000337620 SLC9A9Q8IVB4 645 aa16.09■□□□□ 0.17
CBX3-201ENST00000337620 LRRC8AQ8IWT6 810 aa16.09■□□□□ 0.17
CBX3-201ENST00000337620 RNF149Q8NC42 400 aa16.09■□□□□ 0.17
CBX3-201ENST00000337620 ZNF296Q8WUU4 475 aaPredicted RBP16.09■□□□□ 0.17
CBX3-201ENST00000337620 CPLX3Q8WVH0 158 aa16.09■□□□□ 0.17
CBX3-201ENST00000337620 ERO1AQ96HE7 468 aa16.09■□□□□ 0.17
CBX3-201ENST00000337620 ZNF668Q96K58 619 aaPredicted RBP16.09■□□□□ 0.17
CBX3-201ENST00000337620 KCNF1Q9H3M0 494 aa16.09■□□□□ 0.17
CBX3-201ENST00000337620 METTL14Q9HCE5 456 aaKnown RBP16.09■□□□□ 0.17
CBX3-201ENST00000337620 SETD4Q9NVD3 440 aa16.09■□□□□ 0.17
CBX3-201ENST00000337620 SNRPFP62306 86 aaKnown RBP16.08■□□□□ 0.16
CBX3-201ENST00000337620 GOLGA8FQ08AF8 430 aa16.08■□□□□ 0.16
CBX3-201ENST00000337620 GOLGA8DPQ0D2H9 430 aa16.08■□□□□ 0.16
CBX3-201ENST00000337620 MTHFD1LQ6UB35 978 aa16.08■□□□□ 0.16
CBX3-201ENST00000337620 PCMTD1Q96MG8 357 aaPredicted RBP16.08■□□□□ 0.16
CBX3-201ENST00000337620 NLRP4Q96MN2 994 aa16.08■□□□□ 0.16
CBX3-201ENST00000337620 HSPBP1Q9NZL4 362 aa16.08■□□□□ 0.16
CBX3-201ENST00000337620 USP20Q9Y2K6 914 aa16.08■□□□□ 0.16
CBX3-201ENST00000337620 CASP8AP2Q9UKL3 1982 aa16.08■□□□□ 0.16
CBX3-201ENST00000337620 A0A1W2PQC6 194 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 PGK1P00558 417 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 RARBP10826 455 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 SFPQP23246 707 aaKnown RBP eCLIP16.07■□□□□ 0.16
CBX3-201ENST00000337620 TMOD1P28289 359 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 CCND3P30281 292 aaPredicted RBP16.07■□□□□ 0.16
CBX3-201ENST00000337620 MYBPC2Q14324 1141 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 MFSD10Q14728 455 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 SYCP1Q15431 976 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 DCAF17Q5H9S7 520 aaPredicted RBP16.07■□□□□ 0.16
CBX3-201ENST00000337620 GNASQ5JWF2 1037 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 TCERG1LQ5VWI1 586 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 SPC25Q9HBM1 224 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 SAGE1Q9NXZ1 904 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 TSKSQ9UJT2 592 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 AKT3Q9Y243 479 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.07■□□□□ 0.161e-9■■■□□ 15.5
CBX3-201ENST00000337620 ITIH6Q6UXX5 1313 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 EVPLQ92817 2033 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 MYADML2A6NDP7 307 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 GNRH1P01148 92 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 SMIM10L2AP0DMW4 78 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 SMIM10L2BP0DMW5 78 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 SCP2P22307 547 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 ADSSP30520 456 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 PSEN2P49810 448 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 LIG4P49917 911 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 ADKP55263 362 aaKnown RBP16.07■□□□□ 0.16
CBX3-201ENST00000337620 GJA9P57773 515 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 RBL2Q08999 1139 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 TFDP1Q14186 410 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 MARCH8Q5T0T0 291 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 ZBTB8OSQ8IWT0 167 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 C12orf56Q8IXR9 622 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 CCDC155Q8N6L0 562 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 XXYLT1Q8NBI6 393 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 CCDC150Q8NCX0 1101 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 MKNK1Q9BUB5 465 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 TMEM134Q9H6X4 195 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 ZKSCAN5Q9Y2L8 839 aa16.07■□□□□ 0.16
CBX3-201ENST00000337620 KAT6AQ92794 2004 aa16.06■□□□□ 0.16
CBX3-201ENST00000337620 RRN3P2A6NIE6 340 aa16.06■□□□□ 0.16
CBX3-201ENST00000337620 ASAP2O43150 1006 aa16.06■□□□□ 0.16
CBX3-201ENST00000337620 HMGCRP04035 888 aa16.06■□□□□ 0.16
CBX3-201ENST00000337620 KLK7P49862 253 aa16.06■□□□□ 0.16
CBX3-201ENST00000337620 EFNA5P52803 228 aa16.06■□□□□ 0.16
CBX3-201ENST00000337620 KCNH2Q12809 1159 aa16.06■□□□□ 0.16
CBX3-201ENST00000337620 ARHGEF6Q15052 776 aa16.06■□□□□ 0.16
CBX3-201ENST00000337620 SLC39A4Q6P5W5 647 aa16.06■□□□□ 0.16
CBX3-201ENST00000337620 ZSCAN30Q86W11 494 aa16.06■□□□□ 0.16
CBX3-201ENST00000337620 ZSWIM2Q8NEG5 633 aa16.06■□□□□ 0.16
CBX3-201ENST00000337620 POMGNT1Q8WZA1 660 aa16.06■□□□□ 0.16
CBX3-201ENST00000337620 HTTP42858 3142 aa16.06■□□□□ 0.16
CBX3-201ENST00000337620 PHLPP2Q6ZVD8 1323 aa16.06■□□□□ 0.16
CBX3-201ENST00000337620 NRCAMQ92823 1304 aa16.06■□□□□ 0.16
CBX3-201ENST00000337620 GOLGA8IPA6NC78 632 aa16.06■□□□□ 0.16
CBX3-201ENST00000337620 GOLGA8JA6NMD2 632 aa16.06■□□□□ 0.16
CBX3-201ENST00000337620 TULP1O00294 542 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms