RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 CYP26B1Q9NR63 512 aa11.94□□□□□ -0.5
CAPN3-202ENST00000337571 ORC3Q9UBD5 711 aaPredicted RBP11.94□□□□□ -0.5
CAPN3-202ENST00000337571 HCSTQ9UBK5 93 aa11.94□□□□□ -0.5
CAPN3-202ENST00000337571 TPCN1Q9ULQ1 816 aa11.94□□□□□ -0.5
CAPN3-202ENST00000337571 PIN4Q9Y237 131 aaKnown RBP11.94□□□□□ -0.5
CAPN3-202ENST00000337571 PCDHGC5Q9Y5F6 944 aa11.94□□□□□ -0.5
CAPN3-202ENST00000337571 IGKV6-21A0A0C4DH24 114 aa11.93□□□□□ -0.5
CAPN3-202ENST00000337571 TBX3O15119 743 aa11.93□□□□□ -0.5
CAPN3-202ENST00000337571 SLC37A4O43826 429 aa11.93□□□□□ -0.5
CAPN3-202ENST00000337571 STBD1O95210 358 aa11.93□□□□□ -0.5
CAPN3-202ENST00000337571 PHKA2P46019 1235 aa11.93□□□□□ -0.5
CAPN3-202ENST00000337571 RNASELQ05823 741 aaKnown RBP11.93□□□□□ -0.5
CAPN3-202ENST00000337571 NCBP1Q09161 790 aaKnown RBP11.93□□□□□ -0.5
CAPN3-202ENST00000337571 TRIM29Q14134 588 aa11.93□□□□□ -0.5
CAPN3-202ENST00000337571 SMC1AQ14683 1233 aaKnown RBP11.93□□□□□ -0.5
CAPN3-202ENST00000337571 NPY5RQ15761 445 aa11.93□□□□□ -0.5
CAPN3-202ENST00000337571 CLLU1OSQ5K130 101 aa11.93□□□□□ -0.5
CAPN3-202ENST00000337571 GLB1LQ6UWU2 654 aa11.93□□□□□ -0.5
CAPN3-202ENST00000337571 KSR1Q8IVT5 923 aa11.93□□□□□ -0.5
CAPN3-202ENST00000337571 SLFN12Q8IYM2 578 aa11.93□□□□□ -0.5
CAPN3-202ENST00000337571 TCP11Q8WWU5 503 aa11.93□□□□□ -0.5
CAPN3-202ENST00000337571 PGBD4Q96DM1 585 aa11.93□□□□□ -0.5
CAPN3-202ENST00000337571 OCEL1Q9H607 264 aa11.93□□□□□ -0.5
CAPN3-202ENST00000337571 MUTYHQ9UIF7 546 aa11.93□□□□□ -0.5
CAPN3-202ENST00000337571 USP15Q9Y4E8 981 aaPredicted RBP11.93□□□□□ -0.5
CAPN3-202ENST00000337571 PPME1Q9Y570 386 aa11.93□□□□□ -0.5
CAPN3-202ENST00000337571 EML1O00423 815 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 STK25O00506 426 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 FSCN2O14926 492 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 CXCL14O95715 111 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 GLP2RO95838 553 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 SRGAP2CP0DJJ0 459 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 HOXB8P17481 243 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-202ENST00000337571 KRT2P35908 639 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 PBX3P40426 434 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 RFC5P40937 340 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 TECP42680 631 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 RAB27AP51159 221 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 AK2P54819 239 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 BCAR1P56945 870 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 EPHA7Q15375 998 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 HERC4Q5GLZ8 1057 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-202ENST00000337571 PLA2G4FQ68DD2 849 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 NCAPH2Q6IBW4 605 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 LLGL2Q6P1M3 1020 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 TMEM184AQ6ZMB5 413 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 EFCAB3Q8N7B9 438 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 MRPL43Q8N983 215 aaKnown RBP11.92□□□□□ -0.5
CAPN3-202ENST00000337571 PRPF31Q8WWY3 499 aaKnown RBP11.92□□□□□ -0.5
CAPN3-202ENST00000337571 PSPC1Q8WXF1 523 aaKnown RBP11.92□□□□□ -0.5
CAPN3-202ENST00000337571 TMEM169Q96HH4 297 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 RPGRIP1Q96KN7 1286 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 MFSD14AQ96MC6 490 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 TRAIPQ9BWF2 469 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 PHF7Q9BWX1 381 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-202ENST00000337571 ZSWIM4Q9H7M6 989 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 KCNMB3Q9NPA1 279 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 RNF19AQ9NV58 838 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 PPP4R2Q9NY27 417 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 VAV3Q9UKW4 847 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 COL4A3BPQ9Y5P4 624 aa11.92□□□□□ -0.5
CAPN3-202ENST00000337571 HIDE1A8MVS5 230 aa11.91□□□□□ -0.5
CAPN3-202ENST00000337571 NT5C1B-RDH14C9J2C7 533 aa11.91□□□□□ -0.5
CAPN3-202ENST00000337571 ASAP2O43150 1006 aa11.91□□□□□ -0.5
CAPN3-202ENST00000337571 GAS2O43903 313 aaKnown RBP11.91□□□□□ -0.5
CAPN3-202ENST00000337571 ZC3H11AO75152 810 aaKnown RBP eCLIP11.91□□□□□ -0.5
CAPN3-202ENST00000337571 ATF7P17544 494 aaPredicted RBP11.91□□□□□ -0.5
CAPN3-202ENST00000337571 YWHABP31946 246 aaKnown RBP11.91□□□□□ -0.5
CAPN3-202ENST00000337571 NPEPPSP55786 919 aa11.91□□□□□ -0.5
CAPN3-202ENST00000337571 LONRF3Q496Y0 759 aa11.91□□□□□ -0.5
CAPN3-202ENST00000337571 TPRNQ4KMQ1 711 aa11.91□□□□□ -0.5
CAPN3-202ENST00000337571 XKR9Q5GH70 373 aa11.91□□□□□ -0.5
CAPN3-202ENST00000337571 CES5AQ6NT32 575 aa11.91□□□□□ -0.5
CAPN3-202ENST00000337571 ANKRD54Q6NXT1 300 aa11.91□□□□□ -0.5
CAPN3-202ENST00000337571 SRGAP1Q7Z6B7 1085 aa11.91□□□□□ -0.5
CAPN3-202ENST00000337571 ZNF598Q86UK7 904 aaKnown RBP11.91□□□□□ -0.5
CAPN3-202ENST00000337571 TPH2Q8IWU9 490 aa11.91□□□□□ -0.5
CAPN3-202ENST00000337571 C4orf19Q8IY42 314 aa11.91□□□□□ -0.5
CAPN3-202ENST00000337571 SLC39A11Q8N1S5 342 aa11.91□□□□□ -0.5
CAPN3-202ENST00000337571 URGCPQ8TCY9 931 aa11.91□□□□□ -0.5
CAPN3-202ENST00000337571 OXER1Q8TDS5 423 aa11.91□□□□□ -0.5
CAPN3-202ENST00000337571 EDAQ92838 391 aa11.91□□□□□ -0.5
CAPN3-202ENST00000337571 CASP10Q92851 521 aa11.91□□□□□ -0.5
CAPN3-202ENST00000337571 FAM193BQ96PV7 902 aaPredicted RBP11.91□□□□□ -0.5
CAPN3-202ENST00000337571 CEP89Q96ST8 783 aa11.91□□□□□ -0.5
CAPN3-202ENST00000337571 GJB4Q9NTQ9 266 aa11.91□□□□□ -0.5
CAPN3-202ENST00000337571 FAM105AQ9NUU6 356 aa11.91□□□□□ -0.5
CAPN3-202ENST00000337571 PCDHA12Q9UN75 941 aa11.91□□□□□ -0.5
CAPN3-202ENST00000337571 INPP5FQ9Y2H2 1132 aa11.91□□□□□ -0.5
CAPN3-202ENST00000337571 STK24Q9Y6E0 443 aa11.91□□□□□ -0.5
CAPN3-202ENST00000337571 LOC730098B7Z3J9 87 aa11.9□□□□□ -0.5
CAPN3-202ENST00000337571 ZNF623O75123 536 aa11.9□□□□□ -0.5
CAPN3-202ENST00000337571 RBM10P98175 930 aaKnown RBP11.9□□□□□ -0.5
CAPN3-202ENST00000337571 LAMTOR4Q0VGL1 99 aa11.9□□□□□ -0.5
CAPN3-202ENST00000337571 GIT2Q14161 759 aa11.9□□□□□ -0.5
CAPN3-202ENST00000337571 CBX2Q14781 532 aaPredicted RBP11.9□□□□□ -0.5
CAPN3-202ENST00000337571 NOMO2Q5JPE7 1267 aa11.9□□□□□ -0.5
CAPN3-202ENST00000337571 NECAB1Q8N987 351 aa11.9□□□□□ -0.5
CAPN3-202ENST00000337571 HAS1Q92839 578 aa11.9□□□□□ -0.5
CAPN3-202ENST00000337571 LPPQ93052 612 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms