RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 JPH2Q9BR39 696 aaPredicted RBP27.34■■□□□ 1.97
CDKN3-202ENST00000335183 TRAIPQ9BWF2 469 aa27.34■■□□□ 1.97
CDKN3-202ENST00000335183 ZBP1Q9H171 429 aa27.34■■□□□ 1.97
CDKN3-202ENST00000335183 ADAM7Q9H2U9 754 aa27.34■■□□□ 1.97
CDKN3-202ENST00000335183 POMKQ9H5K3 350 aa27.34■■□□□ 1.97
CDKN3-202ENST00000335183 TBC1D13Q9NVG8 400 aa27.34■■□□□ 1.97
CDKN3-202ENST00000335183 WDFY4Q6ZS81 3184 aa27.34■■□□□ 1.97
CDKN3-202ENST00000335183 ZDBF2Q9HCK1 2354 aa27.33■■□□□ 1.97
CDKN3-202ENST00000335183 MEIS3P2A8K0S8 358 aa27.33■■□□□ 1.97
CDKN3-202ENST00000335183 RNASELQ05823 741 aaKnown RBP27.33■■□□□ 1.97
CDKN3-202ENST00000335183 ITIH3Q06033 890 aa27.33■■□□□ 1.97
CDKN3-202ENST00000335183 RSPH1Q8WYR4 309 aa27.33■■□□□ 1.97
CDKN3-202ENST00000335183 NECTIN4Q96NY8 510 aa27.33■■□□□ 1.97
CDKN3-202ENST00000335183 PRRX2Q99811 253 aa27.33■■□□□ 1.97
CDKN3-202ENST00000335183 GBP3Q9H0R5 595 aa27.33■■□□□ 1.97
CDKN3-202ENST00000335183 NRDE2Q9H7Z3 1164 aa27.33■■□□□ 1.97
CDKN3-202ENST00000335183 CCDC194A0A1B0GVG4 234 aa27.32■■□□□ 1.96
CDKN3-202ENST00000335183 WEE2P0C1S8 567 aa27.32■■□□□ 1.96
CDKN3-202ENST00000335183 RAB27AP51159 221 aa27.32■■□□□ 1.96
CDKN3-202ENST00000335183 NPEPPSP55786 919 aa27.32■■□□□ 1.96
CDKN3-202ENST00000335183 NOMO2Q5JPE7 1267 aa27.32■■□□□ 1.96
CDKN3-202ENST00000335183 RARS2Q5T160 578 aaKnown RBP27.32■■□□□ 1.96
CDKN3-202ENST00000335183 FAM177A1Q8N128 213 aaPredicted RBP27.32■■□□□ 1.96
CDKN3-202ENST00000335183 IGSF21Q96ID5 467 aa27.32■■□□□ 1.96
CDKN3-202ENST00000335183 CYP26B1Q9NR63 512 aa27.32■■□□□ 1.96
CDKN3-202ENST00000335183 ARID2Q68CP9 1835 aa27.32■■□□□ 1.96
CDKN3-202ENST00000335183 QARSP47897 775 aaKnown RBP27.31■■□□□ 1.96
CDKN3-202ENST00000335183 VCPP55072 806 aaKnown RBP27.31■■□□□ 1.96
CDKN3-202ENST00000335183 C12orf76Q8N812 135 aaPredicted RBP27.31■■□□□ 1.96
CDKN3-202ENST00000335183 SLC7A3Q8WY07 619 aa27.31■■□□□ 1.96
CDKN3-202ENST00000335183 PDRG1Q9NUG6 133 aa27.31■■□□□ 1.96
CDKN3-202ENST00000335183 COL4A3BPQ9Y5P4 624 aa27.31■■□□□ 1.96
CDKN3-202ENST00000335183 CARNS1A5YM72 827 aa27.3■■□□□ 1.96
CDKN3-202ENST00000335183 C2CD4DB7Z1M9 353 aa27.3■■□□□ 1.96
CDKN3-202ENST00000335183 EPB41L2O43491 1005 aaKnown RBP27.3■■□□□ 1.96
CDKN3-202ENST00000335183 DKC1O60832 514 aaKnown RBP eCLIP27.3■■□□□ 1.96
CDKN3-202ENST00000335183 OFD1O75665 1012 aa27.3■■□□□ 1.96
CDKN3-202ENST00000335183 GALTP07902 379 aa27.3■■□□□ 1.96
CDKN3-202ENST00000335183 CTSAP10619 480 aa27.3■■□□□ 1.96
CDKN3-202ENST00000335183 MTHFRP42898 656 aa27.3■■□□□ 1.96
CDKN3-202ENST00000335183 POLGP54098 1239 aaPredicted RBP27.3■■□□□ 1.96
CDKN3-202ENST00000335183 PPP2R5CQ13362 524 aa27.3■■□□□ 1.96
CDKN3-202ENST00000335183 DDX53Q86TM3 631 aaKnown RBP27.3■■□□□ 1.96
CDKN3-202ENST00000335183 KREMEN2Q8NCW0 462 aa27.3■■□□□ 1.96
CDKN3-202ENST00000335183 BCL7CQ8WUZ0 217 aaPredicted RBP27.3■■□□□ 1.96
CDKN3-202ENST00000335183 PGBD4Q96DM1 585 aa27.3■■□□□ 1.96
CDKN3-202ENST00000335183 CEP170P1Q96L14 293 aa27.3■■□□□ 1.96
CDKN3-202ENST00000335183 RIPOR3Q96MK2 946 aa27.3■■□□□ 1.96
CDKN3-202ENST00000335183 TM6SF1Q9BZW5 370 aa27.3■■□□□ 1.96
CDKN3-202ENST00000335183 IFT122Q9HBG6 1241 aa27.3■■□□□ 1.96
CDKN3-202ENST00000335183 BMP2KQ9NSY1 1161 aaPredicted RBP27.3■■□□□ 1.96
CDKN3-202ENST00000335183 DNAJB4Q9UDY4 337 aa27.3■■□□□ 1.96
CDKN3-202ENST00000335183 VAV3Q9UKW4 847 aa27.3■■□□□ 1.96
CDKN3-202ENST00000335183 ZNF623O75123 536 aa27.29■■□□□ 1.96
CDKN3-202ENST00000335183 EPCAMP16422 314 aa27.29■■□□□ 1.96
CDKN3-202ENST00000335183 TCF15Q12870 199 aa27.29■■□□□ 1.96
CDKN3-202ENST00000335183 GIT2Q14161 759 aa27.29■■□□□ 1.96
CDKN3-202ENST00000335183 KANK3Q6NY19 840 aa27.29■■□□□ 1.96
CDKN3-202ENST00000335183 NEK8Q86SG6 692 aa27.29■■□□□ 1.96
CDKN3-202ENST00000335183 ZNF579Q8NAF0 562 aaKnown RBP27.29■■□□□ 1.96
CDKN3-202ENST00000335183 TMEM143Q96AN5 459 aa27.29■■□□□ 1.96
CDKN3-202ENST00000335183 PHF20Q9BVI0 1012 aa27.29■■□□□ 1.96
CDKN3-202ENST00000335183 AGPAT5Q9NUQ2 364 aa27.29■■□□□ 1.96
CDKN3-202ENST00000335183 DZANK1Q9NVP4 752 aa27.29■■□□□ 1.96
CDKN3-202ENST00000335183 PCDHB2Q9Y5E7 798 aa27.29■■□□□ 1.96
CDKN3-202ENST00000335183 MARCH6O60337 910 aa27.28■■□□□ 1.96
CDKN3-202ENST00000335183 CCNT1O60563 726 aaKnown RBP27.28■■□□□ 1.96
CDKN3-202ENST00000335183 SRGAP2CP0DJJ0 459 aa27.28■■□□□ 1.96
CDKN3-202ENST00000335183 AVPR2P30518 371 aa27.28■■□□□ 1.96
CDKN3-202ENST00000335183 SLC11A1P49279 550 aa27.28■■□□□ 1.96
CDKN3-202ENST00000335183 ZNF280BQ86YH2 543 aa27.28■■□□□ 1.96
CDKN3-202ENST00000335183 URGCPQ8TCY9 931 aa27.28■■□□□ 1.96
CDKN3-202ENST00000335183 FAM20AQ96MK3 541 aa27.28■■□□□ 1.96
CDKN3-202ENST00000335183 KCNMB3Q9NPA1 279 aa27.28■■□□□ 1.96
CDKN3-202ENST00000335183 WRAP73Q9P2S5 460 aaPredicted RBP27.28■■□□□ 1.96
CDKN3-202ENST00000335183 SORCS3Q9UPU3 1222 aa27.28■■□□□ 1.96
CDKN3-202ENST00000335183 IRAK3Q9Y616 596 aa27.28■■□□□ 1.96
CDKN3-202ENST00000335183 CDKL5O76039 1030 aa27.27■■□□□ 1.96
CDKN3-202ENST00000335183 PDGFBP01127 241 aaPredicted RBP27.27■■□□□ 1.96
CDKN3-202ENST00000335183 P4HBP07237 508 aaKnown RBP27.27■■□□□ 1.96
CDKN3-202ENST00000335183 SCRN1Q12765 414 aa27.27■■□□□ 1.96
CDKN3-202ENST00000335183 MTMR3Q13615 1198 aa27.27■■□□□ 1.96
CDKN3-202ENST00000335183 PRPF31Q8WWY3 499 aaKnown RBP27.27■■□□□ 1.96
CDKN3-202ENST00000335183 PSPC1Q8WXF1 523 aaKnown RBP27.27■■□□□ 1.96
CDKN3-202ENST00000335183 DBR1Q9UK59 544 aaKnown RBP27.27■■□□□ 1.96
CDKN3-202ENST00000335183 DENND4AQ7Z401 1863 aa27.27■■□□□ 1.96
CDKN3-202ENST00000335183 DTNBO60941 627 aa27.26■■□□□ 1.95
CDKN3-202ENST00000335183 GCFC2P16383 781 aaKnown RBP27.26■■□□□ 1.95
CDKN3-202ENST00000335183 XBP1P17861 261 aa27.26■■□□□ 1.95
CDKN3-202ENST00000335183 ATAT1Q5SQI0 421 aa27.26■■□□□ 1.95
CDKN3-202ENST00000335183 PPP4R3AQ6IN85 833 aa27.26■■□□□ 1.95
CDKN3-202ENST00000335183 KIAA1841Q6NSI8 718 aa27.26■■□□□ 1.95
CDKN3-202ENST00000335183 AGMOQ6ZNB7 445 aa27.26■■□□□ 1.95
CDKN3-202ENST00000335183 PIK3AP1Q6ZUJ8 805 aa27.26■■□□□ 1.95
CDKN3-202ENST00000335183 SRGAP1Q7Z6B7 1085 aa27.26■■□□□ 1.95
CDKN3-202ENST00000335183 EXOC8Q8IYI6 725 aa27.26■■□□□ 1.95
CDKN3-202ENST00000335183 TDRD5Q8NAT2 981 aaKnown RBP27.26■■□□□ 1.95
CDKN3-202ENST00000335183 FAM193BQ96PV7 902 aaPredicted RBP27.26■■□□□ 1.95
CDKN3-202ENST00000335183 LXNQ9BS40 222 aa27.26■■□□□ 1.95
CDKN3-202ENST00000335183 DHX33Q9H6R0 707 aaKnown RBP27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms