RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 SKIP12755 728 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 PPP1R2P41236 205 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 PTK2Q05397 1052 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 LRRC63Q05C16 580 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 USP17L24Q0WX57 530 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 PLS1Q14651 629 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 USP17L6PQ6QN14 398 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 LRRC55Q6ZSA7 311 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 SUPT20HQ8NEM7 779 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 RAB3IPQ96QF0 476 aaPredicted RBP12.75□□□□□ -0.37
LIMK2-202ENST00000333611 MAGEF1Q9HAY2 307 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 GRID2IPA4D2P6 1211 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 GNPATO15228 680 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 FGRP09769 529 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 PTDSS1P48651 473 aaKnown RBP12.75□□□□□ -0.37
LIMK2-202ENST00000333611 KCNH2Q12809 1159 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 ZNF211Q13398 564 aaPredicted RBP12.75□□□□□ -0.37
LIMK2-202ENST00000333611 NFIXQ14938 502 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 FIGNQ5HY92 759 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 DPP8Q6V1X1 898 aaPredicted RBP12.75□□□□□ -0.37
LIMK2-202ENST00000333611 CCDC65Q8IXS2 484 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 HAUS1Q96CS2 278 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.75□□□□□ -0.374e-7■■■■■ 31.1
LIMK2-202ENST00000333611 DDX18Q9NVP1 670 aaKnown RBP12.75□□□□□ -0.37
LIMK2-202ENST00000333611 CEP72Q9P209 647 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 USP15Q9Y4E8 981 aaPredicted RBP12.75□□□□□ -0.37
LIMK2-202ENST00000333611 POTEFA5A3E0 1075 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 SART1O43290 800 aaKnown RBP12.74□□□□□ -0.37
LIMK2-202ENST00000333611 POTEIP0CG38 1075 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 STX2P32856 288 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 TNIP1Q15025 636 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 HGSNATQ68CP4 663 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 POTEGQ6S5H5 508 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 POTEEQ6S8J3 1075 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 SLC30A10Q6XR72 485 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 HS2ST1Q7LGA3 356 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 SCYL3Q8IZE3 742 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 ERP27Q96DN0 273 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 NEUROG2Q9H2A3 272 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 ZNF287Q9HBT7 754 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 ETNK2Q9NVF9 386 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 TSKSQ9UJT2 592 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 SNX24Q9Y343 169 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 UTP11Q9Y3A2 253 aaKnown RBP12.74□□□□□ -0.37
LIMK2-202ENST00000333611 M0R2N6 131 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 RARAP10276 462 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 CDK17Q00537 523 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 SLC18A3Q16572 532 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 SBK1Q52WX2 424 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 RDH13Q8NBN7 331 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 CNKSR1Q969H4 720 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 PHF12Q96QT6 1004 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 EMILIN3Q9NT22 766 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 SLIT2O94813 1529 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 CICQ96RK0 1608 aaPredicted RBP12.74□□□□□ -0.37
LIMK2-202ENST00000333611 RIMBP2O15034 1052 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 GFPT2O94808 682 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 PEX5P50542 639 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 PDE6CP51160 858 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 MTMR3Q13615 1198 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 MAP7Q14244 749 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 ZNF268Q14587 947 aaPredicted RBP12.74□□□□□ -0.37
LIMK2-202ENST00000333611 NAB2Q15742 525 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 ZC2HC1CQ53FD0 456 aaPredicted RBP12.74□□□□□ -0.37
LIMK2-202ENST00000333611 ALKBH5Q6P6C2 394 aaKnown RBP12.74□□□□□ -0.37
LIMK2-202ENST00000333611 NANOGNBQ7Z5D8 188 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 PALB2Q86YC2 1186 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 PHC3Q8NDX5 983 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 ANKRD2Q9GZV1 360 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 STK17AQ9UEE5 414 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 CHORDC1Q9UHD1 332 aaPredicted RBP12.74□□□□□ -0.37
LIMK2-202ENST00000333611 GGA2Q9UJY4 613 aa12.74□□□□□ -0.37
LIMK2-202ENST00000333611 C6orf229H3BNL8 230 aa12.73□□□□□ -0.37
LIMK2-202ENST00000333611 BPIFB4P59827 614 aa12.73□□□□□ -0.37
LIMK2-202ENST00000333611 UAP1Q16222 522 aaPredicted RBP12.73□□□□□ -0.37
LIMK2-202ENST00000333611 KCTD21Q4G0X4 260 aa12.73□□□□□ -0.37
LIMK2-202ENST00000333611 USP38Q8NB14 1042 aa12.73□□□□□ -0.37
LIMK2-202ENST00000333611 PLCB1Q9NQ66 1216 aa12.73□□□□□ -0.37
LIMK2-202ENST00000333611 HDAC9Q9UKV0 1011 aa12.73□□□□□ -0.37
LIMK2-202ENST00000333611 TDRKHQ9Y2W6 561 aaKnown RBP12.73□□□□□ -0.37
LIMK2-202ENST00000333611 PLA2G4BP0C869 781 aa12.73□□□□□ -0.37
LIMK2-202ENST00000333611 TAL1P17542 331 aaPredicted RBP12.73□□□□□ -0.37
LIMK2-202ENST00000333611 FGFR4P22455 802 aa12.73□□□□□ -0.37
LIMK2-202ENST00000333611 EPHB2P29323 1055 aa12.73□□□□□ -0.37
LIMK2-202ENST00000333611 BTKQ06187 659 aa12.73□□□□□ -0.37
LIMK2-202ENST00000333611 PIGOQ8TEQ8 1089 aa12.73□□□□□ -0.37
LIMK2-202ENST00000333611 FMO2Q99518 471 aa12.73□□□□□ -0.37
LIMK2-202ENST00000333611 IKZF4Q9H2S9 585 aa12.73□□□□□ -0.37
LIMK2-202ENST00000333611 CNOT10Q9H9A5 744 aaKnown RBP12.73□□□□□ -0.37
LIMK2-202ENST00000333611 ARMCX3Q9UH62 379 aaPredicted RBP12.73□□□□□ -0.37
LIMK2-202ENST00000333611 RTCBQ9Y3I0 505 aaKnown RBP12.73□□□□□ -0.37
LIMK2-202ENST00000333611 NOC2LQ9Y3T9 749 aaKnown RBP12.73□□□□□ -0.37
LIMK2-202ENST00000333611 MYH3P11055 1940 aa12.73□□□□□ -0.37
LIMK2-202ENST00000333611 PVALEFA0A1B0GWK0 134 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 A0A1W2PRG0 241 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 FAM196BA6NMK8 535 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 DISP2A7MBM2 1401 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 LSM1O15116 133 aaKnown RBP12.72□□□□□ -0.37
LIMK2-202ENST00000333611 UFL1O94874 794 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 PRLRP16471 622 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms