RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 ARL4AP40617 200 aa13.94□□□□□ -0.18
VSTM4-202ENST00000332853 PHKA2P46019 1235 aa13.94□□□□□ -0.18
VSTM4-202ENST00000332853 ALS2CLQ60I27 953 aa13.94□□□□□ -0.18
VSTM4-202ENST00000332853 ZCCHC17Q9NP64 241 aaKnown RBP13.94□□□□□ -0.18
VSTM4-202ENST00000332853 PFDN4Q9NQP4 134 aa13.94□□□□□ -0.18
VSTM4-202ENST00000332853 GGA3Q9NZ52 723 aa13.94□□□□□ -0.18
VSTM4-202ENST00000332853 ARHGAP23Q9P227 1491 aa13.94□□□□□ -0.18
VSTM4-202ENST00000332853 MSH2P43246 934 aa13.94□□□□□ -0.18
VSTM4-202ENST00000332853 HP1BP3Q5SSJ5 553 aaPredicted RBP13.94□□□□□ -0.18
VSTM4-202ENST00000332853 DSTYKQ6XUX3 929 aa13.94□□□□□ -0.18
VSTM4-202ENST00000332853 ARHGEF18Q6ZSZ5 1173 aa13.94□□□□□ -0.18
VSTM4-202ENST00000332853 PIK3R2O00459 728 aa13.94□□□□□ -0.18
VSTM4-202ENST00000332853 RASGRF2O14827 1237 aa13.94□□□□□ -0.18
VSTM4-202ENST00000332853 FXR2P51116 673 aaKnown RBP eCLIP13.94□□□□□ -0.18
VSTM4-202ENST00000332853 PCSK1NQ9UHG2 260 aa13.94□□□□□ -0.18
VSTM4-202ENST00000332853 TTC7AQ9ULT0 858 aaPredicted RBP13.94□□□□□ -0.18
VSTM4-202ENST00000332853 NOC2LQ9Y3T9 749 aaKnown RBP13.94□□□□□ -0.18
VSTM4-202ENST00000332853 F5H423 210 aaPredicted RBP13.94□□□□□ -0.18
VSTM4-202ENST00000332853 PDE1BQ01064 536 aa13.94□□□□□ -0.18
VSTM4-202ENST00000332853 DMTNQ08495 405 aa13.94□□□□□ -0.18
VSTM4-202ENST00000332853 CUL1Q13616 776 aa13.94□□□□□ -0.18
VSTM4-202ENST00000332853 SLC30A5Q8TAD4 765 aa13.94□□□□□ -0.18
VSTM4-202ENST00000332853 FHOD1Q9Y613 1164 aa13.94□□□□□ -0.18
VSTM4-202ENST00000332853 ANKRD26Q9UPS8 1709 aa13.94□□□□□ -0.18
VSTM4-202ENST00000332853 AFAP1L2Q8N4X5 818 aa13.93□□□□□ -0.18
VSTM4-202ENST00000332853 RNF149Q8NC42 400 aa13.93□□□□□ -0.18
VSTM4-202ENST00000332853 MRPL4Q9BYD3 311 aaKnown RBP13.93□□□□□ -0.18
VSTM4-202ENST00000332853 IL17RBQ9NRM6 502 aa13.93□□□□□ -0.18
VSTM4-202ENST00000332853 EXOC1LA0A1B0GW35 172 aa13.93□□□□□ -0.18
VSTM4-202ENST00000332853 GRB10Q13322 594 aa13.93□□□□□ -0.18
VSTM4-202ENST00000332853 DNAAF3Q8N9W5 541 aa13.93□□□□□ -0.18
VSTM4-202ENST00000332853 EFCC1Q9HA90 598 aa13.93□□□□□ -0.18
VSTM4-202ENST00000332853 UBE4BO95155 1302 aa13.93□□□□□ -0.18
VSTM4-202ENST00000332853 DDTLA6NHG4 134 aaPredicted RBP13.93□□□□□ -0.18
VSTM4-202ENST00000332853 SLC4A1P02730 911 aa13.93□□□□□ -0.18
VSTM4-202ENST00000332853 PLS3P13797 630 aa13.93□□□□□ -0.18
VSTM4-202ENST00000332853 IL9RQ01113 521 aa13.93□□□□□ -0.18
VSTM4-202ENST00000332853 SLC15A2Q16348 729 aa13.93□□□□□ -0.18
VSTM4-202ENST00000332853 GJB7Q6PEY0 223 aa13.93□□□□□ -0.18
VSTM4-202ENST00000332853 RAPH1Q70E73 1250 aa13.93□□□□□ -0.18
VSTM4-202ENST00000332853 ITIH6Q6UXX5 1313 aa13.93□□□□□ -0.18
VSTM4-202ENST00000332853 SYNGAP1Q96PV0 1343 aa13.93□□□□□ -0.18
VSTM4-202ENST00000332853 AGPAT1Q99943 283 aa13.93□□□□□ -0.18
VSTM4-202ENST00000332853 FAM217BQ9NTX9 383 aaPredicted RBP13.93□□□□□ -0.18
VSTM4-202ENST00000332853 HACL1Q9UJ83 578 aa13.93□□□□□ -0.18
VSTM4-202ENST00000332853 CCDC188H7C350 402 aa13.93□□□□□ -0.18
VSTM4-202ENST00000332853 PRPSAP1Q14558 356 aa13.93□□□□□ -0.18
VSTM4-202ENST00000332853 SLMAPQ14BN4 828 aa13.93□□□□□ -0.18
VSTM4-202ENST00000332853 PPP1R2P3Q6NXS1 205 aa13.93□□□□□ -0.18
VSTM4-202ENST00000332853 ZKSCAN4Q969J2 545 aaPredicted RBP13.93□□□□□ -0.18
VSTM4-202ENST00000332853 INPP5FQ9Y2H2 1132 aa13.93□□□□□ -0.18
VSTM4-202ENST00000332853 M0QYV0 167 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 CLTAP09496 248 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 TPD52P55327 224 aaPredicted RBP13.92□□□□□ -0.18
VSTM4-202ENST00000332853 EMBQ6PCB8 327 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 LPAR1Q92633 364 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 CDKL2Q92772 493 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 TAAR1Q96RJ0 339 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 MXRA8Q9BRK3 442 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 GINM1Q9NU53 330 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 SH3BP5O60239 455 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 ZRANB2O95218 330 aaKnown RBP eCLIP13.92□□□□□ -0.18
VSTM4-202ENST00000332853 STAT5BP51692 787 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 RNF10Q8N5U6 811 aaKnown RBP13.92□□□□□ -0.18
VSTM4-202ENST00000332853 TMEM35BQ8NCS4 154 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 FBXL13Q8NEE6 735 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 DEFB129Q9H1M3 183 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 RSPH10B2B2RC85 870 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 MSH4O15457 936 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 RSPH10BP0C881 870 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 UCHL3P15374 230 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 ILDR1Q86SU0 546 aaPredicted RBP13.92□□□□□ -0.18
VSTM4-202ENST00000332853 DAGLBQ8NCG7 672 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 UNC45AQ9H3U1 944 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 SAYSD1Q9NPB0 183 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 KLHL11Q9NVR0 708 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 ARHGAP42A6NI28 874 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 TJP3O95049 919 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 TWF2Q6IBS0 349 aaKnown RBP13.92□□□□□ -0.18
VSTM4-202ENST00000332853 DEFB132Q7Z7B7 95 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 CCDC197Q8NCU1 140 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.92□□□□□ -0.18
VSTM4-202ENST00000332853 LRRC1Q9BTT6 524 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 KIFC3Q9BVG8 833 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 LRFN2Q9ULH4 789 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 HPSEQ9Y251 543 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 AFG3L2Q9Y4W6 797 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 NR3C2P08235 984 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 FMO5P49326 533 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 C4orf50Q6ZRC1 276 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 C1orf54Q8WWF1 131 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 ATG4CQ96DT6 458 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 CFAP57Q96MR6 1250 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 KCNH7Q9NS40 1196 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 HEY1Q9Y5J3 304 aa13.92□□□□□ -0.18
VSTM4-202ENST00000332853 TBX3O15119 743 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 ZBED1O96006 694 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 TXNP10599 105 aaKnown RBP13.91□□□□□ -0.18
VSTM4-202ENST00000332853 SEMA3FQ13275 785 aa13.91□□□□□ -0.18
VSTM4-202ENST00000332853 THOC1Q96FV9 657 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms