RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 CLUL1Q15846 466 aa16.42■□□□□ 0.22
TSPO-201ENST00000329563 FOXD4L5Q5VV16 416 aaPredicted RBP16.42■□□□□ 0.22
TSPO-201ENST00000329563 NCAPH2Q6IBW4 605 aa16.42■□□□□ 0.22
TSPO-201ENST00000329563 PDE12Q6L8Q7 609 aaKnown RBP16.42■□□□□ 0.22
TSPO-201ENST00000329563 RHPN2Q8IUC4 686 aa16.42■□□□□ 0.22
TSPO-201ENST00000329563 EFHBQ8N7U6 833 aa16.42■□□□□ 0.22
TSPO-201ENST00000329563 FOXD4L4Q8WXT5 416 aaPredicted RBP16.42■□□□□ 0.22
TSPO-201ENST00000329563 SCLT1Q96NL6 688 aa16.42■□□□□ 0.22
TSPO-201ENST00000329563 NAP1L4Q99733 375 aaKnown RBP16.42■□□□□ 0.22
TSPO-201ENST00000329563 DHX33Q9H6R0 707 aaKnown RBP16.42■□□□□ 0.22
TSPO-201ENST00000329563 ATP6V0A4Q9HBG4 840 aa16.42■□□□□ 0.22
TSPO-201ENST00000329563 IFT122Q9HBG6 1241 aa16.42■□□□□ 0.22
TSPO-201ENST00000329563 BMP2KQ9NSY1 1161 aaPredicted RBP16.42■□□□□ 0.22
TSPO-201ENST00000329563 CFAP45Q9UL16 551 aa16.42■□□□□ 0.22
TSPO-201ENST00000329563 SLITRK3O94933 977 aa16.41■□□□□ 0.22
TSPO-201ENST00000329563 PBX3P40426 434 aa16.41■□□□□ 0.22
TSPO-201ENST00000329563 C4orf19Q8IY42 314 aa16.41■□□□□ 0.22
TSPO-201ENST00000329563 COLGALT1Q8NBJ5 622 aa16.41■□□□□ 0.22
TSPO-201ENST00000329563 MICAL1Q8TDZ2 1067 aa16.41■□□□□ 0.22
TSPO-201ENST00000329563 CDCA3Q99618 268 aaPredicted RBP16.41■□□□□ 0.22
TSPO-201ENST00000329563 TLR9Q9NR96 1032 aa16.41■□□□□ 0.22
TSPO-201ENST00000329563 A0A0U1RQF3 1178 aa16.4■□□□□ 0.22
TSPO-201ENST00000329563 MEIS3P2A8K0S8 358 aa16.4■□□□□ 0.22
TSPO-201ENST00000329563 FGF18O76093 207 aa16.4■□□□□ 0.22
TSPO-201ENST00000329563 ZSCAN20P17040 1043 aaPredicted RBP16.4■□□□□ 0.22
TSPO-201ENST00000329563 LAG3P18627 525 aa16.4■□□□□ 0.22
TSPO-201ENST00000329563 YWHABP31946 246 aaKnown RBP16.4■□□□□ 0.22
TSPO-201ENST00000329563 NRIP1P48552 1158 aa16.4■□□□□ 0.22
TSPO-201ENST00000329563 ERVFC1P60507 584 aa16.4■□□□□ 0.22
TSPO-201ENST00000329563 CLEC17AQ6ZS10 378 aa16.4■□□□□ 0.22
TSPO-201ENST00000329563 THNSL1Q8IYQ7 743 aa16.4■□□□□ 0.22
TSPO-201ENST00000329563 ABI1Q8IZP0 508 aa16.4■□□□□ 0.22
TSPO-201ENST00000329563 TMEM143Q96AN5 459 aa16.4■□□□□ 0.22
TSPO-201ENST00000329563 CEP170P1Q96L14 293 aa16.4■□□□□ 0.22
TSPO-201ENST00000329563 NLRP4Q96MN2 994 aa16.4■□□□□ 0.22
TSPO-201ENST00000329563 GBP4Q96PP9 640 aa16.4■□□□□ 0.22
TSPO-201ENST00000329563 MTMR9Q96QG7 549 aa16.4■□□□□ 0.22
TSPO-201ENST00000329563 HSD17B14Q9BPX1 270 aa16.4■□□□□ 0.22
TSPO-201ENST00000329563 GCOM2Q9BZD3 368 aaPredicted RBP16.4■□□□□ 0.22
TSPO-201ENST00000329563 TMEM117Q9H0C3 514 aa16.4■□□□□ 0.22
TSPO-201ENST00000329563 TMEM60Q9H2L4 133 aa16.4■□□□□ 0.22
TSPO-201ENST00000329563 TLE6Q9H808 572 aa16.4■□□□□ 0.22
TSPO-201ENST00000329563 MINDY3Q9H8M7 445 aa16.4■□□□□ 0.22
TSPO-201ENST00000329563 XPNPEP1Q9NQW7 623 aa16.4■□□□□ 0.22
TSPO-201ENST00000329563 PUF60Q9UHX1 559 aaKnown RBP16.4■□□□□ 0.22
TSPO-201ENST00000329563 TRIOO75962 3097 aa16.4■□□□□ 0.22
TSPO-201ENST00000329563 A0A087WWV3 80 aa16.39■□□□□ 0.21
TSPO-201ENST00000329563 EYA4O95677 639 aa16.39■□□□□ 0.21
TSPO-201ENST00000329563 GLP2RO95838 553 aa16.39■□□□□ 0.21
TSPO-201ENST00000329563 PPM1AP35813 382 aa16.39■□□□□ 0.21
TSPO-201ENST00000329563 DNM2P50570 870 aa16.39■□□□□ 0.21
TSPO-201ENST00000329563 KRT85P78386 507 aa16.39■□□□□ 0.21
TSPO-201ENST00000329563 RBM10P98175 930 aaKnown RBP16.39■□□□□ 0.21
TSPO-201ENST00000329563 CDC42EP1Q00587 391 aa16.39■□□□□ 0.21
TSPO-201ENST00000329563 COASYQ13057 564 aa16.39■□□□□ 0.21
TSPO-201ENST00000329563 ORC2Q13416 577 aaPredicted RBP16.39■□□□□ 0.21
TSPO-201ENST00000329563 CALCRLQ16602 461 aa16.39■□□□□ 0.21
TSPO-201ENST00000329563 ZNF410Q86VK4 478 aa16.39■□□□□ 0.21
TSPO-201ENST00000329563 SLFN12Q8IYM2 578 aa16.39■□□□□ 0.21
TSPO-201ENST00000329563 RNF169Q8NCN4 708 aa16.39■□□□□ 0.21
TSPO-201ENST00000329563 HELQQ8TDG4 1101 aa16.39■□□□□ 0.21
TSPO-201ENST00000329563 PRPF31Q8WWY3 499 aaKnown RBP16.39■□□□□ 0.21
TSPO-201ENST00000329563 EIF2AK1Q9BQI3 630 aaKnown RBP16.39■□□□□ 0.21
TSPO-201ENST00000329563 KCNH6Q9H252 994 aa16.39■□□□□ 0.21
TSPO-201ENST00000329563 CLEC1BQ9P126 229 aa16.39■□□□□ 0.21
TSPO-201ENST00000329563 COL4A3BPQ9Y5P4 624 aa16.39■□□□□ 0.21
TSPO-201ENST00000329563 ZNF318Q5VUA4 2279 aa16.39■□□□□ 0.21
TSPO-201ENST00000329563 MARCH6O60337 910 aa16.38■□□□□ 0.21
TSPO-201ENST00000329563 BMP15O95972 392 aa16.38■□□□□ 0.21
TSPO-201ENST00000329563 HOXD11P31277 338 aaPredicted RBP16.38■□□□□ 0.21
TSPO-201ENST00000329563 TXKP42681 527 aa16.38■□□□□ 0.21
TSPO-201ENST00000329563 POLGP54098 1239 aaPredicted RBP16.38■□□□□ 0.21
TSPO-201ENST00000329563 EMC2Q15006 297 aa16.38■□□□□ 0.21
TSPO-201ENST00000329563 LONRF3Q496Y0 759 aa16.38■□□□□ 0.21
TSPO-201ENST00000329563 RBM23Q86U06 439 aaKnown RBP16.38■□□□□ 0.21
TSPO-201ENST00000329563 TPH2Q8IWU9 490 aa16.38■□□□□ 0.21
TSPO-201ENST00000329563 LRRC43Q8N309 656 aa16.38■□□□□ 0.21
TSPO-201ENST00000329563 SMRP1Q8NCR6 262 aa16.38■□□□□ 0.21
TSPO-201ENST00000329563 VN1R2Q8NFZ6 395 aa16.38■□□□□ 0.21
TSPO-201ENST00000329563 SLC7A3Q8WY07 619 aa16.38■□□□□ 0.21
TSPO-201ENST00000329563 RSPH1Q8WYR4 309 aa16.38■□□□□ 0.21
TSPO-201ENST00000329563 LPPQ93052 612 aa16.38■□□□□ 0.21
TSPO-201ENST00000329563 SCAND2PQ9GZW5 306 aaPredicted RBP16.38■□□□□ 0.21
TSPO-201ENST00000329563 ZSWIM4Q9H7M6 989 aa16.38■□□□□ 0.21
TSPO-201ENST00000329563 TTC12Q9H892 705 aaPredicted RBP16.38■□□□□ 0.21
TSPO-201ENST00000329563 PCDHA12Q9UN75 941 aa16.38■□□□□ 0.21
TSPO-201ENST00000329563 LZTS1Q9Y250 596 aa16.38■□□□□ 0.21
TSPO-201ENST00000329563 CARNS1A5YM72 827 aa16.37■□□□□ 0.21
TSPO-201ENST00000329563 POTEMA6NI47 508 aa16.37■□□□□ 0.21
TSPO-201ENST00000329563 FSCN2O14926 492 aa16.37■□□□□ 0.21
TSPO-201ENST00000329563 NEMFO60524 1076 aa16.37■□□□□ 0.21
TSPO-201ENST00000329563 BAG4O95429 457 aaKnown RBP16.37■□□□□ 0.21
TSPO-201ENST00000329563 ATP2B1P20020 1258 aa16.37■□□□□ 0.21
TSPO-201ENST00000329563 SFPQP23246 707 aaKnown RBP eCLIP16.37■□□□□ 0.21
TSPO-201ENST00000329563 RFC5P40937 340 aa16.37■□□□□ 0.21
TSPO-201ENST00000329563 PHKA2P46019 1235 aa16.37■□□□□ 0.21
TSPO-201ENST00000329563 LAMTOR4Q0VGL1 99 aa16.37■□□□□ 0.21
TSPO-201ENST00000329563 XKR9Q5GH70 373 aa16.37■□□□□ 0.21
TSPO-201ENST00000329563 HERC4Q5GLZ8 1057 aaPredicted RBP16.37■□□□□ 0.21
TSPO-201ENST00000329563 KCNT2Q6UVM3 1135 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms