RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 SYBUQ9NX95 663 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 SNX24Q9Y343 169 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 HNRNPCL2B2RXH8 293 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 M0R3G1 203 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 CCNE1P24864 410 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 MFAP3P55082 362 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 ARPP19P56211 112 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 BBS9Q3SYG4 887 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 FAM47AQ5JRC9 791 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 TNIP2Q8NFZ5 429 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 DTX3LQ8TDB6 740 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 PBXIP1Q96AQ6 731 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 PNKPQ96T60 521 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 PRPF18Q99633 342 aaKnown RBP5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 GORASP1Q9BQQ3 440 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 CORO1CQ9ULV4 474 aaPredicted RBP5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 SNX12Q9UMY4 172 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 H0YCG3 227 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 BCAMP50895 628 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 KCTD2Q14681 263 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 TTBK2Q6IQ55 1244 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 CCPG1Q9ULG6 757 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 GMEB1Q9Y692 573 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 GTPBP10A4D1E9 387 aaKnown RBP5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 PECAM1P16284 738 aaPredicted RBP5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 IREB2P48200 963 aaKnown RBP5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 STX3Q13277 289 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 CCNI2Q6ZMN8 369 aaPredicted RBP5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 RASGRP2Q7LDG7 609 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 ZBTB8OSQ8IWT0 167 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 DEPDC1BQ8WUY9 529 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 C17orf50Q8WW18 174 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 NCLNQ969V3 563 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 ADNPQ9H2P0 1102 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 TRABDQ9H4I3 376 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 SLC52A2Q9HAB3 445 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 KIF17Q9P2E2 1029 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 MROH5Q6ZUA9 1318 aa5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 RPAP1Q9BWH6 1393 aaPredicted RBP5.71□□□□□ -1.5
SDR42E1-201ENST00000328945 BTNL9Q6UXG8 535 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 PPP4R3CPQ6ZMV5 832 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 CYP4F11Q9HBI6 524 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 SUN2Q9UH99 717 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 MYH3P11055 1940 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 MMP1P03956 469 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 FKBP3Q00688 224 aaKnown RBP5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 G2E3Q7L622 706 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 YTHDF3Q7Z739 585 aaKnown RBP5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 LRRC47Q8N1G4 583 aaKnown RBP5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 FANCBQ8NB91 859 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 USP33Q8TEY7 942 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 UBE4BO95155 1302 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 ARHGEF5Q12774 1597 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 LAMC1P11047 1609 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 IL10P22301 178 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 POLR2BP30876 1174 aaKnown RBP5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 CACNA2D1P54289 1103 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 VCPP55072 806 aaKnown RBP5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 R3HDM1Q15032 1099 aaKnown RBP5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 MAPRE2Q15555 327 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 CERKLQ49MI3 558 aaPredicted RBP5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 C1orf228Q6PIY5 440 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 SPICE1Q8N0Z3 855 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 MMGT1Q8N4V1 131 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 MYOM2P54296 1465 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 ATP8B3O60423 1300 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 LRRC53A6NM62 1247 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 COBLO75128 1261 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 GGPS1O95749 300 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 SLC4A1P02730 911 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 ATP2B4P23634 1241 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 NLRP11P59045 1033 aaKnown RBP5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 OCRLQ01968 901 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 ALKBH5Q6P6C2 394 aaKnown RBP5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 FAM81BQ96LP2 452 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 ADPGKQ9BRR6 497 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 SPTBN1Q01082 2364 aaKnown RBP5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 YEATS2Q9ULM3 1422 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 MTTPP55157 894 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 CDR2LQ86X02 465 aaPredicted RBP5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 SIX6OS1Q8N1H7 587 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 PPM1KQ8N3J5 372 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 RNPC3Q96LT9 517 aaKnown RBP5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 KCNK16Q96T55 309 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 KLC2Q9H0B6 622 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 DDX47Q9H0S4 455 aaKnown RBP5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 MTO1Q9Y2Z2 717 aaKnown RBP5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 KPNA7A9QM74 516 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 XPO1O14980 1071 aaKnown RBP5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 ASNA1O43681 348 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 TNNC2P02585 160 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 HSPD1P10809 573 aaKnown RBP5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 SAT1P21673 171 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 KCNB1Q14721 858 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 DDX42Q86XP3 938 aaKnown RBP eCLIP5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 CATSPER3Q86XQ3 398 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 RFX6Q8HWS3 928 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 SLFN12Q8IYM2 578 aa5.7□□□□□ -1.5
SDR42E1-201ENST00000328945 TAB3Q8N5C8 712 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms