RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 ANKRD36CQ5JPF3 1778 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 BUB1O43683 1085 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 CDK4P11802 303 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 TARSP26639 723 aaKnown RBP12.73□□□□□ -0.37
SHMT2-201ENST00000328923 KLK7P49862 253 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 DNM2P50570 870 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 ARFIP2P53365 341 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 R3HDM1Q15032 1099 aaKnown RBP12.73□□□□□ -0.37
SHMT2-201ENST00000328923 LRRC14Q15048 493 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 PPP2R5BQ15173 497 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 TMC3Q7Z5M5 1100 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 WDR75Q8IWA0 830 aaKnown RBP12.73□□□□□ -0.37
SHMT2-201ENST00000328923 TMCO5AQ8N6Q1 288 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 STK32BQ9NY57 414 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 TBC1D30Q9Y2I9 924 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 NUP98P52948 1817 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 TLDC2A0PJX2 215 aa12.72□□□□□ -0.37
SHMT2-201ENST00000328923 TXKP42681 527 aa12.72□□□□□ -0.37
SHMT2-201ENST00000328923 CUL1Q13616 776 aa12.72□□□□□ -0.37
SHMT2-201ENST00000328923 BCL2A1Q16548 175 aa12.72□□□□□ -0.37
SHMT2-201ENST00000328923 TMEM259Q4ZIN3 620 aa12.72□□□□□ -0.37
SHMT2-201ENST00000328923 WASHC2DQ5SRD0 308 aa12.72□□□□□ -0.37
SHMT2-201ENST00000328923 FAAH2Q6GMR7 532 aa12.72□□□□□ -0.37
SHMT2-201ENST00000328923 PDXDC2PQ6P474 469 aa12.72□□□□□ -0.37
SHMT2-201ENST00000328923 AGGF1Q8N302 714 aaeCLIP12.72□□□□□ -0.37
SHMT2-201ENST00000328923 NME8Q8N427 588 aa12.72□□□□□ -0.37
SHMT2-201ENST00000328923 HELBQ8NG08 1087 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-201ENST00000328923 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.72□□□□□ -0.37
SHMT2-201ENST00000328923 ZNF594Q96JF6 807 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-201ENST00000328923 OLFM3Q96PB7 478 aa12.72□□□□□ -0.37
SHMT2-201ENST00000328923 TBC1D10AQ9BXI6 508 aa12.72□□□□□ -0.37
SHMT2-201ENST00000328923 RNF26Q9BY78 433 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-201ENST00000328923 HAO1Q9UJM8 370 aa12.72□□□□□ -0.37
SHMT2-201ENST00000328923 TMEM110-MUSTN1A8MSY1 372 aa12.72□□□□□ -0.37
SHMT2-201ENST00000328923 O00370 1275 aa12.72□□□□□ -0.37
SHMT2-201ENST00000328923 SERPINB7O75635 380 aa12.72□□□□□ -0.37
SHMT2-201ENST00000328923 PDE1BQ01064 536 aa12.72□□□□□ -0.37
SHMT2-201ENST00000328923 PUS10Q3MIT2 529 aaKnown RBP12.72□□□□□ -0.37
SHMT2-201ENST00000328923 FIGNQ5HY92 759 aa12.72□□□□□ -0.37
SHMT2-201ENST00000328923 POTEEQ6S8J3 1075 aa12.72□□□□□ -0.37
SHMT2-201ENST00000328923 LRRC74BQ6ZQY2 392 aa12.72□□□□□ -0.37
SHMT2-201ENST00000328923 IRF2BP1Q8IU81 584 aa12.72□□□□□ -0.37
SHMT2-201ENST00000328923 PEX5LQ8IYB4 626 aa12.72□□□□□ -0.37
SHMT2-201ENST00000328923 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.72□□□□□ -0.37
SHMT2-201ENST00000328923 DIS3LQ8TF46 1054 aaKnown RBP12.72□□□□□ -0.37
SHMT2-201ENST00000328923 MTMR8Q96EF0 704 aa12.72□□□□□ -0.37
SHMT2-201ENST00000328923 ZMAT2Q96NC0 199 aaKnown RBP12.72□□□□□ -0.37
SHMT2-201ENST00000328923 HNRNPABQ99729 332 aaKnown RBP12.72□□□□□ -0.37
SHMT2-201ENST00000328923 PLA2G12BQ9BX93 195 aa12.72□□□□□ -0.37
SHMT2-201ENST00000328923 TXLNGQ9NUQ3 528 aa12.72□□□□□ -0.37
SHMT2-201ENST00000328923 DDX18Q9NVP1 670 aaKnown RBP12.72□□□□□ -0.37
SHMT2-201ENST00000328923 TSC22D4Q9Y3Q8 395 aa12.72□□□□□ -0.37
SHMT2-201ENST00000328923 A0A1W2PQJ5 194 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 PABPC4LP0CB38 370 aaKnown RBP12.71□□□□□ -0.37
SHMT2-201ENST00000328923 SRGNP10124 158 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 IL6STP40189 918 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-201ENST00000328923 RXRGP48443 463 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 PMS2P54278 862 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 GSTA3Q16772 222 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 CCDC152Q4G0S7 254 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 VWA3BQ502W6 1294 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 KLHL35Q6PF15 583 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 ANKK1Q8NFD2 765 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 MGARPQ8TDB4 240 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 OXER1Q8TDS5 423 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 GAB3Q8WWW8 586 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 SREK1Q8WXA9 508 aaKnown RBP12.71□□□□□ -0.37
SHMT2-201ENST00000328923 IRGQQ8WZA9 623 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 ATP6V0A1Q93050 837 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 CCDC42Q96M95 316 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 PHF12Q96QT6 1004 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 ASCC2Q9H1I8 757 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-201ENST00000328923 AZI2Q9H6S1 392 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 FAIMQ9NVQ4 179 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 ZSWIM5Q9P217 1185 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 WDR46O15213 610 aaKnown RBP12.71□□□□□ -0.37
SHMT2-201ENST00000328923 BIRC5O15392 142 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 PRPF3O43395 683 aaKnown RBP12.71□□□□□ -0.37
SHMT2-201ENST00000328923 ECE2O60344 883 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 PDE5AO76074 875 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 OXSR1O95747 527 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-201ENST00000328923 KRT2P35908 639 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 BAG6P46379 1132 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 ATP2C1P98194 919 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-201ENST00000328923 GIT2Q14161 759 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 ZCWPW2Q504Y3 356 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 FAM182BQ5T319 152 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 TMEM214Q6NUQ4 689 aaKnown RBP12.71□□□□□ -0.37
SHMT2-201ENST00000328923 RFWD3Q6PCD5 774 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 SATL1Q86VE3 508 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 NLRP10Q86W26 655 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 TTC30AQ86WT1 665 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 LPIN2Q92539 896 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 NACC2Q96BF6 587 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 EIF2AQ9BY44 585 aaKnown RBP12.71□□□□□ -0.37
SHMT2-201ENST00000328923 MYLK2Q9H1R3 596 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 RNF14Q9UBS8 474 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 PRKAG3Q9UGI9 489 aa12.71□□□□□ -0.37
SHMT2-201ENST00000328923 PACSIN2Q9UNF0 486 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-201ENST00000328923 PASKQ96RG2 1323 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms