RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 RUNDC3BQ96NL0 473 aa15.76■□□□□ 0.11
SSBP3-201ENST00000326956 USP40Q9NVE5 1235 aa15.76■□□□□ 0.11
SSBP3-201ENST00000326956 TGFB1I1O43294 461 aa15.76■□□□□ 0.11
SSBP3-201ENST00000326956 TRIM49P0CI25 452 aa15.76■□□□□ 0.11
SSBP3-201ENST00000326956 TRIM49CP0CI26 452 aa15.76■□□□□ 0.11
SSBP3-201ENST00000326956 CALCOCO2Q13137 446 aa15.76■□□□□ 0.11
SSBP3-201ENST00000326956 NAA25Q14CX7 972 aa15.76■□□□□ 0.11
SSBP3-201ENST00000326956 USH1GQ495M9 461 aa15.76■□□□□ 0.11
SSBP3-201ENST00000326956 CCDC137Q6PK04 289 aaKnown RBP15.76■□□□□ 0.11
SSBP3-201ENST00000326956 EPS8L3Q8TE67 593 aaKnown RBP15.76■□□□□ 0.11
SSBP3-201ENST00000326956 MBOAT7Q96N66 472 aa15.76■□□□□ 0.11
SSBP3-201ENST00000326956 EIF2AK1Q9BQI3 630 aaKnown RBP15.76■□□□□ 0.11
SSBP3-201ENST00000326956 EPB41L4BQ9H329 900 aa15.76■□□□□ 0.11
SSBP3-201ENST00000326956 OLFML3Q9NRN5 406 aa15.76■□□□□ 0.11
SSBP3-201ENST00000326956 TAS2R14Q9NYV8 317 aa15.76■□□□□ 0.11
SSBP3-201ENST00000326956 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.76■□□□□ 0.111e-7■■■■□ 21.7
SSBP3-201ENST00000326956 RGL1Q9NZL6 768 aa15.76■□□□□ 0.11
SSBP3-201ENST00000326956 EIF3DO15371 548 aaKnown RBP eCLIP15.75■□□□□ 0.11
SSBP3-201ENST00000326956 FOSP01100 380 aaPredicted RBP15.75■□□□□ 0.11
SSBP3-201ENST00000326956 RPL21P46778 160 aaKnown RBP15.75■□□□□ 0.11
SSBP3-201ENST00000326956 ZC2HC1CQ53FD0 456 aaPredicted RBP15.75■□□□□ 0.11
SSBP3-201ENST00000326956 ZDHHC24Q6UX98 284 aa15.75■□□□□ 0.11
SSBP3-201ENST00000326956 TPH2Q8IWU9 490 aa15.75■□□□□ 0.11
SSBP3-201ENST00000326956 SYCP3Q8IZU3 236 aa15.75■□□□□ 0.11
SSBP3-201ENST00000326956 MGARPQ8TDB4 240 aa15.75■□□□□ 0.11
SSBP3-201ENST00000326956 MKNK1Q9BUB5 465 aa15.75■□□□□ 0.11
SSBP3-201ENST00000326956 AMNQ9BXJ7 453 aa15.75■□□□□ 0.11
SSBP3-201ENST00000326956 BCAS3Q9H6U6 928 aa15.75■□□□□ 0.11
SSBP3-201ENST00000326956 PTPN22Q9Y2R2 807 aa15.75■□□□□ 0.11
SSBP3-201ENST00000326956 VCAM1P19320 739 aa15.75■□□□□ 0.11
SSBP3-201ENST00000326956 CETN1Q12798 172 aa15.75■□□□□ 0.11
SSBP3-201ENST00000326956 MESDQ14696 234 aa15.75■□□□□ 0.11
SSBP3-201ENST00000326956 Q4G0T1 1027 aa15.75■□□□□ 0.11
SSBP3-201ENST00000326956 CCDC38Q502W7 563 aa15.75■□□□□ 0.11
SSBP3-201ENST00000326956 SLFN13Q68D06 897 aa15.75■□□□□ 0.11
SSBP3-201ENST00000326956 RINT1Q6NUQ1 792 aa15.75■□□□□ 0.11
SSBP3-201ENST00000326956 AADACL2Q6P093 401 aa15.75■□□□□ 0.11
SSBP3-201ENST00000326956 BTNL9Q6UXG8 535 aa15.75■□□□□ 0.11
SSBP3-201ENST00000326956 RDH13Q8NBN7 331 aa15.75■□□□□ 0.11
SSBP3-201ENST00000326956 AGPAT1Q99943 283 aa15.75■□□□□ 0.11
SSBP3-201ENST00000326956 PARVGQ9HBI0 331 aa15.75■□□□□ 0.11
SSBP3-201ENST00000326956 DBR1Q9UK59 544 aaKnown RBP15.75■□□□□ 0.11
SSBP3-201ENST00000326956 MEIS2O14770 477 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 EXOC3O60645 756 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 SHMT1P34896 483 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 FAM178BQ8IXR5 827 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 IKZF4Q9H2S9 585 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 DDX4Q9NQI0 724 aaKnown RBP15.74■□□□□ 0.11
SSBP3-201ENST00000326956 CCNL1Q9UK58 526 aaPredicted RBP15.74■□□□□ 0.11
SSBP3-201ENST00000326956 PASKQ96RG2 1323 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 KIF13BQ9NQT8 1826 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 FTLP02792 175 aaPredicted RBP15.74■□□□□ 0.11
SSBP3-201ENST00000326956 CTTNQ14247 550 aaKnown RBP15.74■□□□□ 0.11
SSBP3-201ENST00000326956 BARGINQ6ZT62 677 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 POLR3CQ9BUI4 534 aaPredicted RBP15.74■□□□□ 0.11
SSBP3-201ENST00000326956 GRHL1Q9NZI5 618 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 COG5Q9UP83 839 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 SLC12A4Q9UP95 1085 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 SPATA31A5Q5VU36 1347 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 SPATA31A7Q8IWB4 1347 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 RPTORQ8N122 1335 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 FAM86B1E9PN63 330 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 SPOPO43791 374 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 SUN1O94901 812 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 FAM86B2P0C5J1 330 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 SCP2P22307 547 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 CBWD6Q4V339 395 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 CBWD3Q5JTY5 395 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 CBWD5Q5RIA9 395 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 FBXO11Q86XK2 927 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 KSR1Q8IVT5 923 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 PRELID2Q8N945 189 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 MIEF2Q96C03 454 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 CCDC17Q96LX7 622 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 ADAM7Q9H2U9 754 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 PCYOX1Q9UHG3 505 aa15.74■□□□□ 0.11
SSBP3-201ENST00000326956 PFASO15067 1338 aa15.73■□□□□ 0.11
SSBP3-201ENST00000326956 CDK5RAP2Q96SN8 1893 aa15.73■□□□□ 0.11
SSBP3-201ENST00000326956 COL5A3P25940 1745 aaPredicted RBP15.73■□□□□ 0.11
SSBP3-201ENST00000326956 MSH4O15457 936 aa15.73■□□□□ 0.11
SSBP3-201ENST00000326956 RIPK2O43353 540 aa15.73■□□□□ 0.11
SSBP3-201ENST00000326956 CHMP2AO43633 222 aa15.73■□□□□ 0.11
SSBP3-201ENST00000326956 GGPS1O95749 300 aa15.73■□□□□ 0.11
SSBP3-201ENST00000326956 RARGP13631 454 aa15.73■□□□□ 0.11
SSBP3-201ENST00000326956 PTGIRP43119 386 aa15.73■□□□□ 0.11
SSBP3-201ENST00000326956 SNAP25P60880 206 aa15.73■□□□□ 0.11
SSBP3-201ENST00000326956 GPC5P78333 572 aa15.73■□□□□ 0.11
SSBP3-201ENST00000326956 CCHCR1Q8TD31 782 aa15.73■□□□□ 0.11
SSBP3-201ENST00000326956 KRT35Q92764 455 aa15.73■□□□□ 0.11
SSBP3-201ENST00000326956 BORCS6Q96GS4 357 aa15.73■□□□□ 0.11
SSBP3-201ENST00000326956 ZSWIM1Q9BR11 485 aa15.73■□□□□ 0.11
SSBP3-201ENST00000326956 KCNK9Q9NPC2 374 aa15.73■□□□□ 0.11
SSBP3-201ENST00000326956 NHSQ6T4R5 1651 aa15.73■□□□□ 0.11
SSBP3-201ENST00000326956 FOXN3O00409 490 aaPredicted RBP15.73■□□□□ 0.11
SSBP3-201ENST00000326956 MYO1EQ12965 1108 aa15.73■□□□□ 0.11
SSBP3-201ENST00000326956 COG2Q14746 738 aa15.73■□□□□ 0.11
SSBP3-201ENST00000326956 TRAPPC3LQ5T215 181 aa15.73■□□□□ 0.11
SSBP3-201ENST00000326956 PALB2Q86YC2 1186 aa15.73■□□□□ 0.11
SSBP3-201ENST00000326956 DCAF4Q8WV16 495 aa15.73■□□□□ 0.11
SSBP3-201ENST00000326956 RBM17Q96I25 401 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms