RNA–Protein interactions for RNA: ENST00000324677.11

SSH2-202, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-202ENST00000324677 NEK8Q86SG6 692 aa22.23■■□□□ 1.15
SSH2-202ENST00000324677 TMEM173Q86WV6 379 aaPredicted RBP22.23■■□□□ 1.15
SSH2-202ENST00000324677 VPS52Q8N1B4 723 aa22.23■■□□□ 1.15
SSH2-202ENST00000324677 ZBP1Q9H171 429 aa22.23■■□□□ 1.15
SSH2-202ENST00000324677 IFT122Q9HBG6 1241 aa22.23■■□□□ 1.15
SSH2-202ENST00000324677 TBC1D13Q9NVG8 400 aa22.23■■□□□ 1.15
SSH2-202ENST00000324677 CDH22Q9UJ99 828 aa22.23■■□□□ 1.15
SSH2-202ENST00000324677 CARNS1A5YM72 827 aa22.22■■□□□ 1.15
SSH2-202ENST00000324677 MEIS3P2A8K0S8 358 aa22.22■■□□□ 1.15
SSH2-202ENST00000324677 DKC1O60832 514 aaKnown RBP eCLIP22.22■■□□□ 1.15
SSH2-202ENST00000324677 CDKL5O76039 1030 aa22.22■■□□□ 1.15
SSH2-202ENST00000324677 CA8P35219 290 aa22.22■■□□□ 1.15
SSH2-202ENST00000324677 RAB27AP51159 221 aa22.22■■□□□ 1.15
SSH2-202ENST00000324677 ITIH3Q06033 890 aa22.22■■□□□ 1.15
SSH2-202ENST00000324677 NOMO2Q5JPE7 1267 aa22.22■■□□□ 1.15
SSH2-202ENST00000324677 GLB1LQ6UWU2 654 aa22.22■■□□□ 1.15
SSH2-202ENST00000324677 SUGP1Q8IWZ8 645 aaKnown RBP22.22■■□□□ 1.15
SSH2-202ENST00000324677 FBXL6Q8N531 539 aa22.22■■□□□ 1.15
SSH2-202ENST00000324677 PRSS33Q8NF86 280 aa22.22■■□□□ 1.15
SSH2-202ENST00000324677 ASIC4Q96FT7 647 aa22.22■■□□□ 1.15
SSH2-202ENST00000324677 IGSF21Q96ID5 467 aa22.22■■□□□ 1.15
SSH2-202ENST00000324677 SLKQ9H2G2 1235 aaPredicted RBP22.22■■□□□ 1.15
SSH2-202ENST00000324677 ADAM7Q9H2U9 754 aa22.22■■□□□ 1.15
SSH2-202ENST00000324677 NRDE2Q9H7Z3 1164 aa22.22■■□□□ 1.15
SSH2-202ENST00000324677 COL4A3BPQ9Y5P4 624 aa22.22■■□□□ 1.15
SSH2-202ENST00000324677 OFD1O75665 1012 aa22.21■■□□□ 1.15
SSH2-202ENST00000324677 P4HBP07237 508 aaKnown RBP22.21■■□□□ 1.15
SSH2-202ENST00000324677 GALTP07902 379 aa22.21■■□□□ 1.15
SSH2-202ENST00000324677 GCFC2P16383 781 aaKnown RBP22.21■■□□□ 1.15
SSH2-202ENST00000324677 SP100P23497 879 aaPredicted RBP22.21■■□□□ 1.15
SSH2-202ENST00000324677 POLGP54098 1239 aaPredicted RBP22.21■■□□□ 1.15
SSH2-202ENST00000324677 IER5LQ5T953 404 aa22.21■■□□□ 1.15
SSH2-202ENST00000324677 CES5AQ6NT32 575 aa22.21■■□□□ 1.15
SSH2-202ENST00000324677 DDX53Q86TM3 631 aaKnown RBP22.21■■□□□ 1.15
SSH2-202ENST00000324677 ZNF579Q8NAF0 562 aaKnown RBP22.21■■□□□ 1.15
SSH2-202ENST00000324677 SLC7A3Q8WY07 619 aa22.21■■□□□ 1.15
SSH2-202ENST00000324677 CEP170P1Q96L14 293 aa22.21■■□□□ 1.15
SSH2-202ENST00000324677 NECTIN4Q96NY8 510 aa22.21■■□□□ 1.15
SSH2-202ENST00000324677 DHX33Q9H6R0 707 aaKnown RBP22.21■■□□□ 1.15
SSH2-202ENST00000324677 AGPAT5Q9NUQ2 364 aa22.21■■□□□ 1.15
SSH2-202ENST00000324677 WRAP73Q9P2S5 460 aaPredicted RBP22.21■■□□□ 1.15
SSH2-202ENST00000324677 INPP5FQ9Y2H2 1132 aa22.21■■□□□ 1.15
SSH2-202ENST00000324677 NR2E1Q9Y466 385 aa22.21■■□□□ 1.15
SSH2-202ENST00000324677 PPME1Q9Y570 386 aa22.21■■□□□ 1.15
SSH2-202ENST00000324677 IRAK3Q9Y616 596 aa22.21■■□□□ 1.15
SSH2-202ENST00000324677 STK36Q9NRP7 1315 aa22.21■■□□□ 1.15
SSH2-202ENST00000324677 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.2■■□□□ 1.14
SSH2-202ENST00000324677 CCNT1O60563 726 aaKnown RBP22.2■■□□□ 1.14
SSH2-202ENST00000324677 XBP1P17861 261 aa22.2■■□□□ 1.14
SSH2-202ENST00000324677 RNASELQ05823 741 aaKnown RBP22.2■■□□□ 1.14
SSH2-202ENST00000324677 EXOC8Q8IYI6 725 aa22.2■■□□□ 1.14
SSH2-202ENST00000324677 BCL7CQ8WUZ0 217 aaPredicted RBP22.2■■□□□ 1.14
SSH2-202ENST00000324677 AUTS2Q8WXX7 1259 aa22.2■■□□□ 1.14
SSH2-202ENST00000324677 HAS1Q92839 578 aa22.2■■□□□ 1.14
SSH2-202ENST00000324677 PGBD4Q96DM1 585 aa22.2■■□□□ 1.14
SSH2-202ENST00000324677 POMKQ9H5K3 350 aa22.2■■□□□ 1.14
SSH2-202ENST00000324677 TSHZ2Q9NRE2 1034 aa22.2■■□□□ 1.14
SSH2-202ENST00000324677 GJB4Q9NTQ9 266 aa22.2■■□□□ 1.14
SSH2-202ENST00000324677 TBX3O15119 743 aa22.19■■□□□ 1.14
SSH2-202ENST00000324677 CTSAP10619 480 aa22.19■■□□□ 1.14
SSH2-202ENST00000324677 GIT2Q14161 759 aa22.19■■□□□ 1.14
SSH2-202ENST00000324677 EPHA7Q15375 998 aa22.19■■□□□ 1.14
SSH2-202ENST00000324677 PIK3AP1Q6ZUJ8 805 aa22.19■■□□□ 1.14
SSH2-202ENST00000324677 ZBTB33Q86T24 672 aa22.19■■□□□ 1.14
SSH2-202ENST00000324677 OXER1Q8TDS5 423 aa22.19■■□□□ 1.14
SSH2-202ENST00000324677 PRPF31Q8WWY3 499 aaKnown RBP22.19■■□□□ 1.14
SSH2-202ENST00000324677 PSPC1Q8WXF1 523 aaKnown RBP22.19■■□□□ 1.14
SSH2-202ENST00000324677 TMEM143Q96AN5 459 aa22.19■■□□□ 1.14
SSH2-202ENST00000324677 PRRX2Q99811 253 aa22.19■■□□□ 1.14
SSH2-202ENST00000324677 DNAJB4Q9UDY4 337 aa22.19■■□□□ 1.14
SSH2-202ENST00000324677 PCDHB2Q9Y5E7 798 aa22.19■■□□□ 1.14
SSH2-202ENST00000324677 DENND4AQ7Z401 1863 aa22.19■■□□□ 1.14
SSH2-202ENST00000324677 USP34Q70CQ2 3546 aa22.19■■□□□ 1.14
SSH2-202ENST00000324677 PFKFB2O60825 505 aa22.18■■□□□ 1.14
SSH2-202ENST00000324677 RFC5P40937 340 aa22.18■■□□□ 1.14
SSH2-202ENST00000324677 MTHFRP42898 656 aa22.18■■□□□ 1.14
SSH2-202ENST00000324677 SLC11A1P49279 550 aa22.18■■□□□ 1.14
SSH2-202ENST00000324677 AGMOQ6ZNB7 445 aa22.18■■□□□ 1.14
SSH2-202ENST00000324677 SRGAP1Q7Z6B7 1085 aa22.18■■□□□ 1.14
SSH2-202ENST00000324677 MRPL10Q7Z7H8 261 aaKnown RBP22.18■■□□□ 1.14
SSH2-202ENST00000324677 ZNF280BQ86YH2 543 aa22.18■■□□□ 1.14
SSH2-202ENST00000324677 C4orf19Q8IY42 314 aa22.18■■□□□ 1.14
SSH2-202ENST00000324677 TMEM87AQ8NBN3 555 aa22.18■■□□□ 1.14
SSH2-202ENST00000324677 NAP1L4Q99733 375 aaKnown RBP22.18■■□□□ 1.14
SSH2-202ENST00000324677 LXNQ9BS40 222 aa22.18■■□□□ 1.14
SSH2-202ENST00000324677 GBP3Q9H0R5 595 aa22.18■■□□□ 1.14
SSH2-202ENST00000324677 MINDY3Q9H8M7 445 aa22.18■■□□□ 1.14
SSH2-202ENST00000324677 DZANK1Q9NVP4 752 aa22.18■■□□□ 1.14
SSH2-202ENST00000324677 TPCN1Q9ULQ1 816 aa22.18■■□□□ 1.14
SSH2-202ENST00000324677 C2CD4DB7Z1M9 353 aa22.17■■□□□ 1.14
SSH2-202ENST00000324677 B4GALT3O60512 393 aa22.17■■□□□ 1.14
SSH2-202ENST00000324677 DTNBO60941 627 aa22.17■■□□□ 1.14
SSH2-202ENST00000324677 SRGAP2CP0DJJ0 459 aa22.17■■□□□ 1.14
SSH2-202ENST00000324677 EPCAMP16422 314 aa22.17■■□□□ 1.14
SSH2-202ENST00000324677 YWHABP31946 246 aaKnown RBP22.17■■□□□ 1.14
SSH2-202ENST00000324677 PTPN5P54829 565 aa22.17■■□□□ 1.14
SSH2-202ENST00000324677 LAMTOR4Q0VGL1 99 aa22.17■■□□□ 1.14
SSH2-202ENST00000324677 EARS2Q5JPH6 523 aaKnown RBP22.17■■□□□ 1.14
SSH2-202ENST00000324677 RARS2Q5T160 578 aaKnown RBP22.17■■□□□ 1.14
SSH2-202ENST00000324677 POTEDQ86YR6 584 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms