RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 AP3B2Q13367 1082 aa21.48■■□□□ 1.03
CRLF3-201ENST00000324238 EMC10Q5UCC4 262 aa21.48■■□□□ 1.03
CRLF3-201ENST00000324238 NSMFQ6X4W1 530 aa21.48■■□□□ 1.03
CRLF3-201ENST00000324238 C1orf186Q6ZWK4 172 aa21.48■■□□□ 1.03
CRLF3-201ENST00000324238 ZDHHC15Q96MV8 337 aa21.48■■□□□ 1.03
CRLF3-201ENST00000324238 NAP1L4Q99733 375 aaKnown RBP21.48■■□□□ 1.03
CRLF3-201ENST00000324238 EPB41L4BQ9H329 900 aa21.48■■□□□ 1.03
CRLF3-201ENST00000324238 SLITRK6Q9H5Y7 841 aa21.48■■□□□ 1.03
CRLF3-201ENST00000324238 MLXIPLQ9NP71 852 aa21.48■■□□□ 1.03
CRLF3-201ENST00000324238 AGPAT3Q9NRZ7 376 aa21.48■■□□□ 1.03
CRLF3-201ENST00000324238 PRR12Q9ULL5 1215 aa21.48■■□□□ 1.03
CRLF3-201ENST00000324238 CES2O00748 559 aa21.47■■□□□ 1.03
CRLF3-201ENST00000324238 MYL7Q01449 175 aa21.47■■□□□ 1.03
CRLF3-201ENST00000324238 PPATQ06203 517 aa21.47■■□□□ 1.03
CRLF3-201ENST00000324238 RBM26Q5T8P6 1007 aaKnown RBP21.47■■□□□ 1.03
CRLF3-201ENST00000324238 JAMLQ86YT9 394 aa21.47■■□□□ 1.03
CRLF3-201ENST00000324238 HSD17B14Q9BPX1 270 aa21.47■■□□□ 1.03
CRLF3-201ENST00000324238 VCPKMTQ9H867 229 aa21.47■■□□□ 1.03
CRLF3-201ENST00000324238 DBR1Q9UK59 544 aaKnown RBP21.47■■□□□ 1.03
CRLF3-201ENST00000324238 GOLGA8IPA6NC78 632 aa21.47■■□□□ 1.03
CRLF3-201ENST00000324238 GOLGA8JA6NMD2 632 aa21.47■■□□□ 1.03
CRLF3-201ENST00000324238 ARP10275 920 aa21.47■■□□□ 1.03
CRLF3-201ENST00000324238 CHN1P15882 459 aa21.47■■□□□ 1.03
CRLF3-201ENST00000324238 HSPA1LP34931 641 aa21.47■■□□□ 1.03
CRLF3-201ENST00000324238 OTOP1Q7RTM1 612 aa21.47■■□□□ 1.03
CRLF3-201ENST00000324238 KRT27Q7Z3Y8 459 aa21.47■■□□□ 1.03
CRLF3-201ENST00000324238 EPS8L3Q8TE67 593 aaKnown RBP21.47■■□□□ 1.03
CRLF3-201ENST00000324238 ERP44Q9BS26 406 aa21.47■■□□□ 1.03
CRLF3-201ENST00000324238 KLC4Q9NSK0 619 aa21.47■■□□□ 1.03
CRLF3-201ENST00000324238 FRMD4BQ9Y2L6 1034 aa21.47■■□□□ 1.03
CRLF3-201ENST00000324238 ALDH1B1P30837 517 aa21.46■■□□□ 1.03
CRLF3-201ENST00000324238 TTC27Q6P3X3 843 aa21.46■■□□□ 1.03
CRLF3-201ENST00000324238 OTUD6AQ7L8S5 288 aa21.46■■□□□ 1.03
CRLF3-201ENST00000324238 CEP57Q86XR8 500 aa21.46■■□□□ 1.03
CRLF3-201ENST00000324238 MGARPQ8TDB4 240 aa21.46■■□□□ 1.03
CRLF3-201ENST00000324238 FAM20AQ96MK3 541 aa21.46■■□□□ 1.03
CRLF3-201ENST00000324238 PPP1R12BO60237 982 aaPredicted RBP21.46■■□□□ 1.03
CRLF3-201ENST00000324238 RAD17O75943 681 aa21.46■■□□□ 1.03
CRLF3-201ENST00000324238 LMNB1P20700 586 aa21.46■■□□□ 1.03
CRLF3-201ENST00000324238 BIRC3Q13489 604 aa21.46■■□□□ 1.03
CRLF3-201ENST00000324238 DACT2Q5SW24 774 aa21.46■■□□□ 1.03
CRLF3-201ENST00000324238 HS2ST1Q7LGA3 356 aa21.46■■□□□ 1.03
CRLF3-201ENST00000324238 ZNF720Q7Z2F6 126 aa21.46■■□□□ 1.03
CRLF3-201ENST00000324238 CACNA2D3Q8IZS8 1091 aa21.46■■□□□ 1.03
CRLF3-201ENST00000324238 DCAF4Q8WV16 495 aa21.46■■□□□ 1.03
CRLF3-201ENST00000324238 SCLT1Q96NL6 688 aa21.46■■□□□ 1.03
CRLF3-201ENST00000324238 VEZTQ9HBM0 779 aa21.46■■□□□ 1.03
CRLF3-201ENST00000324238 ZBTB12Q9Y330 459 aaPredicted RBP21.46■■□□□ 1.03
CRLF3-201ENST00000324238 IGLV3-22A0A075B6J6 115 aa21.45■■□□□ 1.03
CRLF3-201ENST00000324238 FIZ1Q96SL8 496 aa21.45■■□□□ 1.03
CRLF3-201ENST00000324238 FAM114A2Q9NRY5 505 aa21.45■■□□□ 1.03
CRLF3-201ENST00000324238 NYAP2Q9P242 653 aa21.45■■□□□ 1.03
CRLF3-201ENST00000324238 APEX2Q9UBZ4 518 aa21.45■■□□□ 1.03
CRLF3-201ENST00000324238 TRPC5Q9UL62 973 aaPredicted RBP21.45■■□□□ 1.03
CRLF3-201ENST00000324238 SLC16A3O15427 465 aaKnown RBP21.45■■□□□ 1.02
CRLF3-201ENST00000324238 GAS7O60861 476 aa21.45■■□□□ 1.02
CRLF3-201ENST00000324238 APBA3O96018 575 aa21.45■■□□□ 1.02
CRLF3-201ENST00000324238 TMEM253P0C7T8 217 aa21.45■■□□□ 1.02
CRLF3-201ENST00000324238 RPL21P46778 160 aaKnown RBP21.45■■□□□ 1.02
CRLF3-201ENST00000324238 PMS2P54278 862 aa21.45■■□□□ 1.02
CRLF3-201ENST00000324238 PTENP60484 403 aa21.45■■□□□ 1.02
CRLF3-201ENST00000324238 IRX3P78415 501 aaPredicted RBP21.45■■□□□ 1.02
CRLF3-201ENST00000324238 MTMR3Q13615 1198 aa21.45■■□□□ 1.02
CRLF3-201ENST00000324238 LRRC14Q15048 493 aa21.45■■□□□ 1.02
CRLF3-201ENST00000324238 BMT2Q1RMZ1 405 aa21.45■■□□□ 1.02
CRLF3-201ENST00000324238 GLIS2Q9BZE0 524 aaPredicted RBP21.45■■□□□ 1.02
CRLF3-201ENST00000324238 ZDHHC18Q9NUE0 388 aa21.45■■□□□ 1.02
CRLF3-201ENST00000324238 EMSYQ7Z589 1322 aa21.45■■□□□ 1.02
CRLF3-201ENST00000324238 ADCY1Q08828 1119 aa21.45■■□□□ 1.02
CRLF3-201ENST00000324238 E2F5Q15329 346 aa21.45■■□□□ 1.02
CRLF3-201ENST00000324238 DUPD1Q68J44 220 aa21.45■■□□□ 1.02
CRLF3-201ENST00000324238 ZDHHC24Q6UX98 284 aa21.45■■□□□ 1.02
CRLF3-201ENST00000324238 TMEM179Q6ZVK1 233 aa21.45■■□□□ 1.02
CRLF3-201ENST00000324238 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.45■■□□□ 1.02
CRLF3-201ENST00000324238 KLRG2A4D1S0 409 aaPredicted RBP21.44■■□□□ 1.02
CRLF3-201ENST00000324238 BHMG1C9JSJ3 638 aaPredicted RBP21.44■■□□□ 1.02
CRLF3-201ENST00000324238 PPP3CAQ08209 521 aa21.44■■□□□ 1.02
CRLF3-201ENST00000324238 RPUSD2Q8IZ73 545 aaKnown RBP21.44■■□□□ 1.02
CRLF3-201ENST00000324238 CBWD1Q9BRT8 395 aa21.44■■□□□ 1.02
CRLF3-201ENST00000324238 HOMER2Q9NSB8 354 aa21.44■■□□□ 1.02
CRLF3-201ENST00000324238 DGKZQ13574 1117 aa21.44■■□□□ 1.02
CRLF3-201ENST00000324238 SNX1Q13596 522 aa21.44■■□□□ 1.02
CRLF3-201ENST00000324238 PODNQ7Z5L7 613 aa21.44■■□□□ 1.02
CRLF3-201ENST00000324238 NLGN1Q8N2Q7 840 aa21.44■■□□□ 1.02
CRLF3-201ENST00000324238 PRELID2Q8N945 189 aa21.44■■□□□ 1.02
CRLF3-201ENST00000324238 MASTLQ96GX5 879 aa21.44■■□□□ 1.02
CRLF3-201ENST00000324238 TAF1LQ8IZX4 1826 aa21.44■■□□□ 1.02
CRLF3-201ENST00000324238 A0A0A6YYK5 440 aaPredicted RBP21.43■■□□□ 1.02
CRLF3-201ENST00000324238 SGPL1O95470 568 aa21.43■■□□□ 1.02
CRLF3-201ENST00000324238 MMEP08473 750 aa21.43■■□□□ 1.02
CRLF3-201ENST00000324238 DRD4P21917 467 aa21.43■■□□□ 1.02
CRLF3-201ENST00000324238 COMTP21964 271 aa21.43■■□□□ 1.02
CRLF3-201ENST00000324238 C2CD6Q53TS8 623 aa21.43■■□□□ 1.02
CRLF3-201ENST00000324238 XPO6Q96QU8 1125 aaKnown RBP21.43■■□□□ 1.02
CRLF3-201ENST00000324238 PCDHB18PQ96TA0 734 aa21.43■■□□□ 1.02
CRLF3-201ENST00000324238 AGPAT1Q99943 283 aa21.43■■□□□ 1.02
CRLF3-201ENST00000324238 GLT8D2Q9H1C3 349 aa21.43■■□□□ 1.02
CRLF3-201ENST00000324238 OLFML3Q9NRN5 406 aa21.43■■□□□ 1.02
CRLF3-201ENST00000324238 CD2APQ9Y5K6 639 aa21.43■■□□□ 1.02
CRLF3-201ENST00000324238 KIAA0391O15091 583 aaKnown RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms