RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 PRICKLE2Q7Z3G6 844 aa7.7□□□□□ -1.18
CSTF3-201ENST00000323959 DYNLL2Q96FJ2 89 aa7.7□□□□□ -1.18
CSTF3-201ENST00000323959 PLEKHA4Q9H4M7 779 aa7.7□□□□□ -1.18
CSTF3-201ENST00000323959 ZNF215Q9UL58 517 aaPredicted RBP7.7□□□□□ -1.18
CSTF3-201ENST00000323959 MAN2B2Q9Y2E5 1009 aa7.7□□□□□ -1.18
CSTF3-201ENST00000323959 TTC41PQ6P2S7 1318 aa7.69□□□□□ -1.18
CSTF3-201ENST00000323959 IGSF9BQ9UPX0 1349 aa7.69□□□□□ -1.18
CSTF3-201ENST00000323959 IGKV6D-41A0A0C4DH26 115 aa7.69□□□□□ -1.18
CSTF3-201ENST00000323959 MAGEB6P1A0A0J9YX57 407 aa7.69□□□□□ -1.18
CSTF3-201ENST00000323959 TMEM232C9JQI7 657 aa7.69□□□□□ -1.18
CSTF3-201ENST00000323959 M0QZ92 97 aa7.69□□□□□ -1.18
CSTF3-201ENST00000323959 MEFVO15553 781 aaPredicted RBP7.69□□□□□ -1.18
CSTF3-201ENST00000323959 ITPKBP27987 946 aa7.69□□□□□ -1.18
CSTF3-201ENST00000323959 UCNP55089 124 aa7.69□□□□□ -1.18
CSTF3-201ENST00000323959 STXBP2Q15833 593 aa7.69□□□□□ -1.18
CSTF3-201ENST00000323959 CELF3Q5SZQ8 465 aaKnown RBP7.69□□□□□ -1.18
CSTF3-201ENST00000323959 TTC22Q5TAA0 569 aa7.69□□□□□ -1.18
CSTF3-201ENST00000323959 SLFN13Q68D06 897 aa7.69□□□□□ -1.18
CSTF3-201ENST00000323959 SEPT14Q6ZU15 432 aa7.69□□□□□ -1.18
CSTF3-201ENST00000323959 CYP2U1Q7Z449 544 aa7.69□□□□□ -1.18
CSTF3-201ENST00000323959 SNIP1Q8TAD8 396 aaKnown RBP7.69□□□□□ -1.18
CSTF3-201ENST00000323959 DNAJC2Q99543 621 aaKnown RBP7.69□□□□□ -1.18
CSTF3-201ENST00000323959 NUSAP1Q9BXS6 441 aaKnown RBP7.69□□□□□ -1.18
CSTF3-201ENST00000323959 PRKD2Q9BZL6 878 aa7.69□□□□□ -1.18
CSTF3-201ENST00000323959 TMX1Q9H3N1 280 aa7.69□□□□□ -1.18
CSTF3-201ENST00000323959 DCP1AQ9NPI6 582 aaPredicted RBP7.69□□□□□ -1.18
CSTF3-201ENST00000323959 PIH1D3Q9NQM4 214 aaKnown RBP7.69□□□□□ -1.18
CSTF3-201ENST00000323959 HCSTQ9UBK5 93 aa7.69□□□□□ -1.18
CSTF3-201ENST00000323959 LGALS2P05162 132 aa7.69□□□□□ -1.18
CSTF3-201ENST00000323959 CYP2D6P10635 497 aa7.69□□□□□ -1.18
CSTF3-201ENST00000323959 CALML3P27482 149 aa7.69□□□□□ -1.18
CSTF3-201ENST00000323959 MAPK6Q16659 721 aa7.69□□□□□ -1.18
CSTF3-201ENST00000323959 LRRC55Q6ZSA7 311 aa7.69□□□□□ -1.18
CSTF3-201ENST00000323959 LMBR1Q8WVP7 490 aa7.69□□□□□ -1.18
CSTF3-201ENST00000323959 DDRGK1Q96HY6 314 aa7.69□□□□□ -1.18
CSTF3-201ENST00000323959 NEUROD6Q96NK8 337 aa7.69□□□□□ -1.18
CSTF3-201ENST00000323959 RANBP17Q9H2T7 1088 aaKnown RBP7.69□□□□□ -1.18
CSTF3-201ENST00000323959 HEBP1Q9NRV9 189 aa7.69□□□□□ -1.18
CSTF3-201ENST00000323959 SETD4Q9NVD3 440 aa7.69□□□□□ -1.18
CSTF3-201ENST00000323959 TRABD2BA6NFA1 517 aa7.68□□□□□ -1.18
CSTF3-201ENST00000323959 TTC39AQ5SRH9 613 aa7.68□□□□□ -1.18
CSTF3-201ENST00000323959 C12orf60Q5U649 245 aa7.68□□□□□ -1.18
CSTF3-201ENST00000323959 MYSM1Q5VVJ2 828 aa7.68□□□□□ -1.18
CSTF3-201ENST00000323959 CAMKK1Q8N5S9 505 aa7.68□□□□□ -1.18
CSTF3-201ENST00000323959 NXPE2Q96DL1 559 aa7.68□□□□□ -1.18
CSTF3-201ENST00000323959 KIF1BPQ96EK5 621 aa7.68□□□□□ -1.18
CSTF3-201ENST00000323959 POM121Q96HA1 1249 aa7.68□□□□□ -1.18
CSTF3-201ENST00000323959 SPATA33Q96N06 139 aa7.68□□□□□ -1.18
CSTF3-201ENST00000323959 LRRCC1Q9C099 1032 aa7.68□□□□□ -1.18
CSTF3-201ENST00000323959 NT5C3AQ9H0P0 336 aa7.68□□□□□ -1.18
CSTF3-201ENST00000323959 ATP8A2Q9NTI2 1148 aa7.68□□□□□ -1.18
CSTF3-201ENST00000323959 KCNH3Q9ULD8 1083 aa7.68□□□□□ -1.18
CSTF3-201ENST00000323959 MRVI1Q9Y6F6 885 aa7.68□□□□□ -1.18
CSTF3-201ENST00000323959 APC2O95996 2303 aa7.68□□□□□ -1.18
CSTF3-201ENST00000323959 ACACAQ13085 2346 aa7.68□□□□□ -1.18
CSTF3-201ENST00000323959 BLACEA4D250 179 aa7.68□□□□□ -1.18
CSTF3-201ENST00000323959 EIF3JO75822 258 aaKnown RBP7.68□□□□□ -1.18
CSTF3-201ENST00000323959 ADH1AP07327 375 aa7.68□□□□□ -1.18
CSTF3-201ENST00000323959 TNFRSF8P28908 595 aa7.68□□□□□ -1.18
CSTF3-201ENST00000323959 TFCP2Q12800 502 aa7.68□□□□□ -1.18
CSTF3-201ENST00000323959 TRIP6Q15654 476 aaKnown RBP7.68□□□□□ -1.18
CSTF3-201ENST00000323959 PPP4R3BQ5MIZ7 849 aa7.68□□□□□ -1.18
CSTF3-201ENST00000323959 CLEC4DQ8WXI8 215 aa7.68□□□□□ -1.18
CSTF3-201ENST00000323959 RNF19AQ9NV58 838 aa7.68□□□□□ -1.18
CSTF3-201ENST00000323959 MYH7P12883 1935 aa7.67□□□□□ -1.18
CSTF3-201ENST00000323959 PNMA6EA0A0J9YXQ4 647 aa7.67□□□□□ -1.18
CSTF3-201ENST00000323959 NFIBO00712 420 aa7.67□□□□□ -1.18
CSTF3-201ENST00000323959 GLUD1P00367 558 aa7.67□□□□□ -1.18
CSTF3-201ENST00000323959 NDUFV2P19404 249 aa7.67□□□□□ -1.18
CSTF3-201ENST00000323959 SLC14A1Q13336 389 aa7.67□□□□□ -1.18
CSTF3-201ENST00000323959 CAMK2BQ13554 666 aa7.67□□□□□ -1.18
CSTF3-201ENST00000323959 ELSPBP1Q96BH3 223 aa7.67□□□□□ -1.18
CSTF3-201ENST00000323959 POLMQ9NP87 494 aaPredicted RBP7.67□□□□□ -1.18
CSTF3-201ENST00000323959 MTCL1Q9Y4B5 1905 aaKnown RBP7.67□□□□□ -1.18
CSTF3-201ENST00000323959 URB1O60287 2271 aaKnown RBP7.67□□□□□ -1.18
CSTF3-201ENST00000323959 NUP205Q92621 2012 aa7.67□□□□□ -1.18
CSTF3-201ENST00000323959 MBLAC1A4D2B0 266 aaPredicted RBP7.67□□□□□ -1.18
CSTF3-201ENST00000323959 OPHN1O60890 802 aa7.67□□□□□ -1.18
CSTF3-201ENST00000323959 DEKP35659 375 aaKnown RBP7.67□□□□□ -1.18
CSTF3-201ENST00000323959 PREPLQ4J6C6 727 aaPredicted RBP7.67□□□□□ -1.18
CSTF3-201ENST00000323959 ANKRD45Q5TZF3 282 aa7.67□□□□□ -1.18
CSTF3-201ENST00000323959 TMC8Q8IU68 726 aa7.67□□□□□ -1.18
CSTF3-201ENST00000323959 ABI1Q8IZP0 508 aa7.67□□□□□ -1.18
CSTF3-201ENST00000323959 TTC9Q92623 222 aa7.67□□□□□ -1.18
CSTF3-201ENST00000323959 TBC1D32Q96NH3 1257 aa7.67□□□□□ -1.18
CSTF3-201ENST00000323959 SEMA4CQ9C0C4 833 aa7.67□□□□□ -1.18
CSTF3-201ENST00000323959 ZNF768Q9H5H4 540 aaKnown RBP7.67□□□□□ -1.18
CSTF3-201ENST00000323959 PCDHB9Q9Y5E1 797 aa7.67□□□□□ -1.18
CSTF3-201ENST00000323959 EML5Q05BV3 1969 aa7.67□□□□□ -1.18
CSTF3-201ENST00000323959 PHLPP2Q6ZVD8 1323 aa7.67□□□□□ -1.18
CSTF3-201ENST00000323959 CREBBPQ92793 2442 aa7.67□□□□□ -1.18
CSTF3-201ENST00000323959 DENND3A2RUS2 1198 aa7.66□□□□□ -1.18
CSTF3-201ENST00000323959 HOXD12P35452 270 aa7.66□□□□□ -1.18
CSTF3-201ENST00000323959 BCAR1P56945 870 aa7.66□□□□□ -1.18
CSTF3-201ENST00000323959 CCDC158Q5M9N0 1113 aa7.66□□□□□ -1.18
CSTF3-201ENST00000323959 NSUN6Q8TEA1 469 aaKnown RBP7.66□□□□□ -1.18
CSTF3-201ENST00000323959 KXD1Q9BQD3 176 aa7.66□□□□□ -1.18
CSTF3-201ENST00000323959 C8orf33Q9H7E9 229 aaPredicted RBP7.66□□□□□ -1.18
CSTF3-201ENST00000323959 C1orf115Q9H7X2 142 aa7.66□□□□□ -1.18
CSTF3-201ENST00000323959 DOPEY2Q9Y3R5 2298 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms