RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 AUTS2Q8WXX7 1259 aa13.82□□□□□ -0.2
TPM3-204ENST00000323144 SLC7A3Q8WY07 619 aa13.82□□□□□ -0.2
TPM3-204ENST00000323144 FAM122AQ96E09 287 aa13.82□□□□□ -0.2
TPM3-204ENST00000323144 MRPL9Q9BYD2 267 aaKnown RBP13.82□□□□□ -0.2
TPM3-204ENST00000323144 DHX33Q9H6R0 707 aaKnown RBP13.82□□□□□ -0.2
TPM3-204ENST00000323144 XPNPEP1Q9NQW7 623 aa13.82□□□□□ -0.2
TPM3-204ENST00000323144 TBC1D13Q9NVG8 400 aa13.82□□□□□ -0.2
TPM3-204ENST00000323144 DACT1Q9NYF0 836 aa13.82□□□□□ -0.2
TPM3-204ENST00000323144 SPG21Q9NZD8 308 aa13.82□□□□□ -0.2
TPM3-204ENST00000323144 DNAJB4Q9UDY4 337 aa13.82□□□□□ -0.2
TPM3-204ENST00000323144 MUC6Q6W4X9 2439 aa13.82□□□□□ -0.2
TPM3-204ENST00000323144 LOC730098B7Z3J9 87 aa13.81□□□□□ -0.2
TPM3-204ENST00000323144 TBX3O15119 743 aa13.81□□□□□ -0.2
TPM3-204ENST00000323144 SEC24BO95487 1268 aa13.81□□□□□ -0.2
TPM3-204ENST00000323144 P4HBP07237 508 aaKnown RBP13.81□□□□□ -0.2
TPM3-204ENST00000323144 ALADP13716 330 aa13.81□□□□□ -0.2
TPM3-204ENST00000323144 CA8P35219 290 aa13.81□□□□□ -0.2
TPM3-204ENST00000323144 TECP42680 631 aa13.81□□□□□ -0.2
TPM3-204ENST00000323144 DNM2P50570 870 aa13.81□□□□□ -0.2
TPM3-204ENST00000323144 ANKRD1Q15327 319 aa13.81□□□□□ -0.2
TPM3-204ENST00000323144 EPHA7Q15375 998 aa13.81□□□□□ -0.2
TPM3-204ENST00000323144 HERC4Q5GLZ8 1057 aaPredicted RBP13.81□□□□□ -0.2
TPM3-204ENST00000323144 SYCE2Q6PIF2 218 aa13.81□□□□□ -0.2
TPM3-204ENST00000323144 DIS3L2Q8IYB7 885 aaKnown RBP13.81□□□□□ -0.2
TPM3-204ENST00000323144 PSPC1Q8WXF1 523 aaKnown RBP13.81□□□□□ -0.2
TPM3-204ENST00000323144 SUSD6Q92537 303 aa13.81□□□□□ -0.2
TPM3-204ENST00000323144 CDCA3Q99618 268 aaPredicted RBP13.81□□□□□ -0.2
TPM3-204ENST00000323144 VN1R3Q9BXE9 311 aa13.81□□□□□ -0.2
TPM3-204ENST00000323144 GBP3Q9H0R5 595 aa13.81□□□□□ -0.2
TPM3-204ENST00000323144 ZBP1Q9H171 429 aa13.81□□□□□ -0.2
TPM3-204ENST00000323144 WDFY4Q6ZS81 3184 aa13.81□□□□□ -0.2
TPM3-204ENST00000323144 POTEMA6NI47 508 aa13.8□□□□□ -0.2
TPM3-204ENST00000323144 BTBD18B2RXH4 712 aa13.8□□□□□ -0.2
TPM3-204ENST00000323144 EOMESO95936 686 aa13.8□□□□□ -0.2
TPM3-204ENST00000323144 RFC5P40937 340 aa13.8□□□□□ -0.2
TPM3-204ENST00000323144 AFF1P51825 1210 aaKnown RBP13.8□□□□□ -0.2
TPM3-204ENST00000323144 LAMTOR4Q0VGL1 99 aa13.8□□□□□ -0.2
TPM3-204ENST00000323144 SMC1AQ14683 1233 aaKnown RBP13.8□□□□□ -0.2
TPM3-204ENST00000323144 XKR9Q5GH70 373 aa13.8□□□□□ -0.2
TPM3-204ENST00000323144 UBXN11Q5T124 520 aa13.8□□□□□ -0.2
TPM3-204ENST00000323144 ANKRD54Q6NXT1 300 aa13.8□□□□□ -0.2
TPM3-204ENST00000323144 AGMOQ6ZNB7 445 aa13.8□□□□□ -0.2
TPM3-204ENST00000323144 HFE2Q6ZVN8 426 aa13.8□□□□□ -0.2
TPM3-204ENST00000323144 C4orf19Q8IY42 314 aa13.8□□□□□ -0.2
TPM3-204ENST00000323144 PRPF31Q8WWY3 499 aaKnown RBP13.8□□□□□ -0.2
TPM3-204ENST00000323144 WASF1Q92558 559 aa13.8□□□□□ -0.2
TPM3-204ENST00000323144 TRAIPQ9BWF2 469 aa13.8□□□□□ -0.2
TPM3-204ENST00000323144 NRDE2Q9H7Z3 1164 aa13.8□□□□□ -0.2
TPM3-204ENST00000323144 HCFC2Q9Y5Z7 792 aa13.8□□□□□ -0.2
TPM3-204ENST00000323144 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.79□□□□□ -0.2
TPM3-204ENST00000323144 C2orf71A6NGG8 1288 aa13.79□□□□□ -0.2
TPM3-204ENST00000323144 NEMFO60524 1076 aa13.79□□□□□ -0.2
TPM3-204ENST00000323144 SRGAP2CP0DJJ0 459 aa13.79□□□□□ -0.2
TPM3-204ENST00000323144 SLC11A1P49279 550 aa13.79□□□□□ -0.2
TPM3-204ENST00000323144 RAB27AP51159 221 aa13.79□□□□□ -0.2
TPM3-204ENST00000323144 GUCY1B3Q02153 619 aa13.79□□□□□ -0.2
TPM3-204ENST00000323144 CAPSQ13938 189 aa13.79□□□□□ -0.2
TPM3-204ENST00000323144 CBX2Q14781 532 aaPredicted RBP13.79□□□□□ -0.2
TPM3-204ENST00000323144 CALCRLQ16602 461 aa13.79□□□□□ -0.2
TPM3-204ENST00000323144 NOMO2Q5JPE7 1267 aa13.79□□□□□ -0.2
TPM3-204ENST00000323144 PDE12Q6L8Q7 609 aaKnown RBP13.79□□□□□ -0.2
TPM3-204ENST00000323144 GLB1LQ6UWU2 654 aa13.79□□□□□ -0.2
TPM3-204ENST00000323144 TMC7Q7Z402 723 aa13.79□□□□□ -0.2
TPM3-204ENST00000323144 FERMT3Q86UX7 667 aa13.79□□□□□ -0.2
TPM3-204ENST00000323144 RNF149Q8NC42 400 aa13.79□□□□□ -0.2
TPM3-204ENST00000323144 ASAP3Q8TDY4 903 aa13.79□□□□□ -0.2
TPM3-204ENST00000323144 TMEM169Q96HH4 297 aa13.79□□□□□ -0.2
TPM3-204ENST00000323144 RPGRIP1Q96KN7 1286 aa13.79□□□□□ -0.2
TPM3-204ENST00000323144 MTRQ99707 1265 aa13.79□□□□□ -0.2
TPM3-204ENST00000323144 NAP1L4Q99733 375 aaKnown RBP13.79□□□□□ -0.2
TPM3-204ENST00000323144 EIF2AK1Q9BQI3 630 aaKnown RBP13.79□□□□□ -0.2
TPM3-204ENST00000323144 JPH2Q9BR39 696 aaPredicted RBP13.79□□□□□ -0.2
TPM3-204ENST00000323144 PHF7Q9BWX1 381 aaPredicted RBP13.79□□□□□ -0.2
TPM3-204ENST00000323144 S1PR5Q9H228 398 aa13.79□□□□□ -0.2
TPM3-204ENST00000323144 TMEM60Q9H2L4 133 aa13.79□□□□□ -0.2
TPM3-204ENST00000323144 BRMS1Q9HCU9 246 aa13.79□□□□□ -0.2
TPM3-204ENST00000323144 CHST12Q9NRB3 414 aa13.79□□□□□ -0.2
TPM3-204ENST00000323144 PCDHB2Q9Y5E7 798 aa13.79□□□□□ -0.2
TPM3-204ENST00000323144 FSD2A1L4K1 749 aa13.78□□□□□ -0.2
TPM3-204ENST00000323144 MARCH6O60337 910 aa13.78□□□□□ -0.2
TPM3-204ENST00000323144 TSPAN1O60635 241 aa13.78□□□□□ -0.2
TPM3-204ENST00000323144 DKC1O60832 514 aaKnown RBP eCLIP13.78□□□□□ -0.2
TPM3-204ENST00000323144 CLASP2O75122 1294 aaKnown RBP13.78□□□□□ -0.2
TPM3-204ENST00000323144 OFD1O75665 1012 aa13.78□□□□□ -0.2
TPM3-204ENST00000323144 WEE2P0C1S8 567 aa13.78□□□□□ -0.2
TPM3-204ENST00000323144 HOXA11P31270 313 aaPredicted RBP13.78□□□□□ -0.2
TPM3-204ENST00000323144 NEK4P51957 841 aa13.78□□□□□ -0.2
TPM3-204ENST00000323144 ZNF280BQ86YH2 543 aa13.78□□□□□ -0.2
TPM3-204ENST00000323144 TPH2Q8IWU9 490 aa13.78□□□□□ -0.2
TPM3-204ENST00000323144 SLFN12Q8IYM2 578 aa13.78□□□□□ -0.2
TPM3-204ENST00000323144 VPS52Q8N1B4 723 aa13.78□□□□□ -0.2
TPM3-204ENST00000323144 CPB2Q96IY4 423 aa13.78□□□□□ -0.2
TPM3-204ENST00000323144 EIF2AQ9BY44 585 aaKnown RBP13.78□□□□□ -0.2
TPM3-204ENST00000323144 ZSWIM4Q9H7M6 989 aa13.78□□□□□ -0.2
TPM3-204ENST00000323144 NGRNQ9NPE2 291 aaKnown RBP13.78□□□□□ -0.2
TPM3-204ENST00000323144 PUF60Q9UHX1 559 aaKnown RBP13.78□□□□□ -0.2
TPM3-204ENST00000323144 A0A087WWV3 80 aa13.77□□□□□ -0.21
TPM3-204ENST00000323144 USO1O60763 962 aaKnown RBP13.77□□□□□ -0.21
TPM3-204ENST00000323144 DDHD2O94830 711 aa13.77□□□□□ -0.21
TPM3-204ENST00000323144 SRGAP2BP0DMP2 458 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms