RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 PI4K2AQ9BTU6 479 aa16.39■□□□□ 0.21
VARS2-201ENST00000321897 hCG_1984214I3L0E3 225 aa16.38■□□□□ 0.21
VARS2-201ENST00000321897 HSPA1LP34931 641 aa16.38■□□□□ 0.21
VARS2-201ENST00000321897 VPS72Q15906 364 aa16.38■□□□□ 0.21
VARS2-201ENST00000321897 SLC18A3Q16572 532 aa16.38■□□□□ 0.21
VARS2-201ENST00000321897 CEP55Q53EZ4 464 aa16.38■□□□□ 0.21
VARS2-201ENST00000321897 LIN9Q5TKA1 542 aa16.38■□□□□ 0.21
VARS2-201ENST00000321897 ZNF713Q8N859 430 aaPredicted RBP16.38■□□□□ 0.21
VARS2-201ENST00000321897 C1orf54Q8WWF1 131 aa16.38■□□□□ 0.21
VARS2-201ENST00000321897 KCND1Q9NSA2 647 aa16.38■□□□□ 0.21
VARS2-201ENST00000321897 LRRC4BQ9NT99 713 aa16.38■□□□□ 0.21
VARS2-201ENST00000321897 TYW1Q9NV66 732 aaKnown RBP16.38■□□□□ 0.21
VARS2-201ENST00000321897 MAGED2Q9UNF1 606 aaPredicted RBP16.38■□□□□ 0.21
VARS2-201ENST00000321897 BZW2Q9Y6E2 419 aaKnown RBP16.38■□□□□ 0.21
VARS2-201ENST00000321897 ATP2A1O14983 1001 aa16.38■□□□□ 0.21
VARS2-201ENST00000321897 SLC10A5Q5PT55 438 aa16.38■□□□□ 0.21
VARS2-201ENST00000321897 SH3RF1Q7Z6J0 888 aa16.38■□□□□ 0.21
VARS2-201ENST00000321897 THNSL1Q8IYQ7 743 aa16.38■□□□□ 0.21
VARS2-201ENST00000321897 ECT2Q9H8V3 914 aa16.38■□□□□ 0.21
VARS2-201ENST00000321897 ANAPC7Q9UJX3 599 aa16.38■□□□□ 0.21
VARS2-201ENST00000321897 DENND3A2RUS2 1198 aa16.38■□□□□ 0.21
VARS2-201ENST00000321897 OPLAHO14841 1288 aa16.38■□□□□ 0.21
VARS2-201ENST00000321897 GAS8O95995 478 aa16.38■□□□□ 0.21
VARS2-201ENST00000321897 POLD1P28340 1107 aa16.38■□□□□ 0.21
VARS2-201ENST00000321897 SOX10P56693 466 aa16.38■□□□□ 0.21
VARS2-201ENST00000321897 NBPF9Q3BBW0 867 aa16.38■□□□□ 0.21
VARS2-201ENST00000321897 ZKSCAN4Q969J2 545 aaPredicted RBP16.38■□□□□ 0.21
VARS2-201ENST00000321897 STAMBPL1Q96FJ0 436 aa16.38■□□□□ 0.21
VARS2-201ENST00000321897 BTBD6Q96KE9 485 aa16.38■□□□□ 0.21
VARS2-201ENST00000321897 C11orf70Q9BRQ4 267 aa16.38■□□□□ 0.21
VARS2-201ENST00000321897 LTN1O94822 1766 aa16.38■□□□□ 0.21
VARS2-201ENST00000321897 PRELPP51888 382 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 SATB1Q01826 763 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 SEZ6Q53EL9 994 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 CDR2LQ86X02 465 aaPredicted RBP16.37■□□□□ 0.21
VARS2-201ENST00000321897 PROM2Q8N271 834 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 CFAP61Q8NHU2 1237 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 RNF25Q96BH1 459 aaPredicted RBP16.37■□□□□ 0.21
VARS2-201ENST00000321897 CEP63Q96MT8 703 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 ACCSQ96QU6 501 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 PRMT1Q99873 361 aaKnown RBP16.37■□□□□ 0.21
VARS2-201ENST00000321897 RNF14Q9UBS8 474 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 GOLGA8MH3BSY2 632 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 MSH4O15457 936 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 LUC7L3O95232 432 aaKnown RBP16.37■□□□□ 0.21
VARS2-201ENST00000321897 CHN1P15882 459 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 CASP5P51878 434 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 AP3B2Q13367 1082 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 FYB2Q5VWT5 728 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 IRF2BP1Q8IU81 584 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 SHISA4Q96DD7 197 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 APOL6Q9BWW8 343 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 FGFBP2Q9BYJ0 223 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 OSGEPQ9NPF4 335 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 TTLL3Q9Y4R7 772 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 ZHX2Q9Y6X8 837 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 TISP43B9A030 160 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 AKAP3O75969 853 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 DESP17661 470 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 GAP43P17677 238 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 GLE1Q53GS7 698 aaKnown RBP16.37■□□□□ 0.21
VARS2-201ENST00000321897 RC3H1Q5TC82 1133 aaKnown RBP16.37■□□□□ 0.21
VARS2-201ENST00000321897 SWSAP1Q6NVH7 229 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 ARMC9Q7Z3E5 817 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 APBB1IPQ7Z5R6 666 aaPredicted RBP16.37■□□□□ 0.21
VARS2-201ENST00000321897 SUPT20HQ8NEM7 779 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 DCAF4Q8WV16 495 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 SCFD1Q8WVM8 642 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 CASKIN2Q8WXE0 1202 aa16.37■□□□□ 0.21
VARS2-201ENST00000321897 RAB3IPQ96QF0 476 aaPredicted RBP16.37■□□□□ 0.21
VARS2-201ENST00000321897 KDM4FA0A1W2PPD8 638 aa16.36■□□□□ 0.21
VARS2-201ENST00000321897 FGFR4P22455 802 aa16.36■□□□□ 0.21
VARS2-201ENST00000321897 RANBP1P43487 201 aa16.36■□□□□ 0.21
VARS2-201ENST00000321897 TMED2Q15363 201 aa16.36■□□□□ 0.21
VARS2-201ENST00000321897 TTLL6Q8N841 843 aa16.36■□□□□ 0.21
VARS2-201ENST00000321897 CYTH2Q99418 400 aa16.36■□□□□ 0.21
VARS2-201ENST00000321897 GABBR1Q9UBS5 961 aa16.36■□□□□ 0.21
VARS2-201ENST00000321897 TTMPQ5BVD1 217 aa16.36■□□□□ 0.21
VARS2-201ENST00000321897 WDR59Q6PJI9 974 aa16.36■□□□□ 0.21
VARS2-201ENST00000321897 RNF207Q6ZRF8 634 aa16.36■□□□□ 0.21
VARS2-201ENST00000321897 ZC3H18Q86VM9 953 aaKnown RBP16.36■□□□□ 0.21
VARS2-201ENST00000321897 SRRM1Q8IYB3 904 aaKnown RBP16.36■□□□□ 0.21
VARS2-201ENST00000321897 INTS2Q9H0H0 1204 aaKnown RBP16.36■□□□□ 0.21
VARS2-201ENST00000321897 ACP6Q9NPH0 428 aa16.36■□□□□ 0.21
VARS2-201ENST00000321897 RASSF2P50749 326 aa16.36■□□□□ 0.21
VARS2-201ENST00000321897 RAD23BP54727 409 aa16.36■□□□□ 0.21
VARS2-201ENST00000321897 DDR1Q08345 913 aa16.36■□□□□ 0.21
VARS2-201ENST00000321897 CUL1Q13616 776 aa16.36■□□□□ 0.21
VARS2-201ENST00000321897 CENPPQ6IPU0 288 aa16.36■□□□□ 0.21
VARS2-201ENST00000321897 NLRP4Q96MN2 994 aa16.36■□□□□ 0.21
VARS2-201ENST00000321897 MAK16Q9BXY0 300 aaKnown RBP16.36■□□□□ 0.21
VARS2-201ENST00000321897 VCPKMTQ9H867 229 aa16.36■□□□□ 0.21
VARS2-201ENST00000321897 CNOT10Q9H9A5 744 aaKnown RBP16.36■□□□□ 0.21
VARS2-201ENST00000321897 DBR1Q9UK59 544 aaKnown RBP16.36■□□□□ 0.21
VARS2-201ENST00000321897 CNTNAP4Q9C0A0 1308 aa16.36■□□□□ 0.21
VARS2-201ENST00000321897 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.35■□□□□ 0.21
VARS2-201ENST00000321897 ARP10275 920 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 SCTRP47872 440 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 ACOT2P49753 483 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 CCDC62Q6P9F0 684 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms